Difference between revisions of "Os07g0668900"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os07g0668900| Description = Similar to Serine/threonine-protein kinase PBS1 (EC 2.7.1.37) (AvrPphB susceptible protein 1)| Version = NM_001067118...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os07g0668900|
 
GeneName = Os07g0668900|

Revision as of 20:41, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0668900

Description

Similar to Serine/threonine-protein kinase PBS1 (EC 2.7.1.37) (AvrPphB susceptible protein 1)

Version

NM_001067118.1 GI:115473968 GeneID:4344229

Length

3609 bp

Definition

Oryza sativa Japonica Group Os07g0668900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:28910206..28913814

Sequence Coding Region

28910718..28911269,28911404..28911795,28912209..28912398,28912510..28912709,28913470..28913575

Expression

GEO Profiles:Os07g0668900

Genome Context

<gbrowseImage1> name=NC_008400:28910206..28913814 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:28910206..28913814 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagctgcttcccgtgctcggggtcgtcggggaagggcggggttgacgccaagagcgtggcggcgctctcgccgggtccgcggcccgcggcgagcgcggcaccagatcgatcaaactcatcacgtggttcaggcattaagaaggacgattctgtccgaagaggaggaagctctgcgaatgatggtccagccaaaattttcactttccgagaattggctgttgccaccaagaatttcagaaaagactgcctgctgggtgaaggtggctttggtcgtgtctataaaggacagatggagaatggacaggttattgccgtgaagcaacttgacagaaatggcctacaaggaaaccgagaatttctcgtggaggttctcatgctaagtctcttgcaccatcctaatctggtcagattaattggctactgcgcagatggtgaccagcggctcctagtttatgagtatatgctattggggtcactagaaaaccatcttcatgatcgcccaccaggcaagaaacctcttgactggaatgcaaggatgaagattgctgttggtgcagcgaagggtttggagtacctgcatgataaggcaaatccaccagtcatatatagagatttcaaatcatcaaatattcttctgggcgaagactattacccaaagctatctgattttgggcttgcaaaacttggtccagttggtgacaaaactcacgtatcaacaagagttatgggaacatatggctattgtgctccagaatatgccatgacaggacagttgacagtaaaatctgatgtttacagctttggcgttgtcttccttgaactcattacaggacgtaaagccattgatcacacccaacctgcaggggagcaaaatcttgttgcatgggctcgtccactgtttagagaccgaaggaagttctgccaaatggccgatccatcgctgcaaggttgttatcccaaaaggggtttgtaccaggctttagctgttgcatctatgtgcttgcaggagaatgcaacatctcgacccctcattgcggatattgtcactgcactttcttatctagcttcaaatcattacgatcctaatgcaccttctgcaaagagttcgaggacttgcccatccaccccaaaggcaaaagcacatcgacgaacaaccagtgttcctgatgcccaacatgctgccgattcacttaactggaacttcccagacttggggaggaaggaaactactagaggggaattcgagcaggatcacagtgaaggttatggcagtggcagtagctctggaaggaatgatggtctagatgttccagaactgctggccttgcataatggacaaaataacagtgaagctgatatatatcacaagtccagtgtcaagcttgatgcccatgagaaacagagatcagggtcaggcaaaggcagcaggcagttttga</cdnaseq>

Protein Sequence

<aaseq>MSCFPCSGSSGKGGVDAKSVAALSPGPRPAASAAPDRSNSSRGS GIKKDDSVRRGGSSANDGPAKIFTFRELAVATKNFRKDCLLGEGGFGRVYKGQMENGQ VIAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVRLIGYCADGDQRLLVYEYMLLGSL ENHLHDRPPGKKPLDWNARMKIAVGAAKGLEYLHDKANPPVIYRDFKSSNILLGEDYY PKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELI TGRKAIDHTQPAGEQNLVAWARPLFRDRRKFCQMADPSLQGCYPKRGLYQALAVASMC LQENATSRPLIADIVTALSYLASNHYDPNAPSAKSSRTCPSTPKAKAHRRTTSVPDAQ HAADSLNWNFPDLGRKETTRGEFEQDHSEGYGSGSSSGRNDGLDVPELLALHNGQNNS EADIYHKSSVKLDAHEKQRSGSGKGSRQF</aaseq>

Gene Sequence

<dnaseqindica>2546..3097#2020..2411#1417..1606#1106..1305#240..345#acaccagcatcttggttgcccttttgtttatgccatcttgagccttgtgccctcgaggccttgacttccttcccctacccccacccccaacatctccctgaatttagctgctttcgcggcacagatcagtgcgcaagccataaagatcgagccttagcttcgagctggaatttatcggcggatcggctggcattttttcagtttgtgcgcgcgcctcaagctcaagaaccgggagagagatgagctgcttcccgtgctcggggtcgtcggggaagggcggggttgacgccaagagcgtggcggcgctctcgccgggtccgcggcccgcggcgagcgcggcaccaggtgaatcccgcatcttagcccccctccgatttctcttcgcagggtgtggaaagattcgatttcttctggtgaatccgcttgctggcgttgccccggtcagctgtatgattctgtatcggtttcgctggttgcgaatttgcagcgagtggctcagtgcggtagctgcgcattggtgtgatccatattggctcgaattctctcttcgtttgggtttaaagggtaacagtgagaaaaaagaagtcaattttgcatagcgttgattgtttattatgctttcttgcaaattggcgctttggtcatttgattgtggtaaataattcaaggctttaggtttgtaaatgttagtctggttgcttgttgagatagtggggttgaaggggacgcaaagctactttcttggaaagaaaatgtaattgattgttctcgtgagaagtggagtgaaagggagaggaaaataaaatctgaactgaagcttgcagctataataataatattattgcaactttcagtctcaggcgaccaggcagtaatgtttgatgtgttgtttactcttgttgtctctaactgattccttcgcgtgggtaattgcttgcttcgaccttgcttgaattacagtccaccctttgcatagttgttgtagtctgaagcgagtacagtaatttagttgccgtgttgctgcgcatgcaagtattatcattctctcatgagatcattgaattgaggaataatatgttaaaatttgcatgttggatgggtcaagatcgatcaaactcatcacgtggttcaggcattaagaaggacgattctgtccgaagaggaggaagctctgcgaatgatggtccagccaaaattttcactttccgagaattggctgttgccaccaagaatttcagaaaagactgcctgctgggtgaaggtggctttggtcgtgtctataaaggacagatggagaatggacaggtttgctattcctaacattggctgctgtgtgctcttgttcattagctgcaatttagagcatgatttttctgagtgtccgacaccttttcttttgcatatatcatctagcaggttattgccgtgaagcaacttgacagaaatggcctacaaggaaaccgagaatttctcgtggaggttctcatgctaagtctcttgcaccatcctaatctggtcagattaattggctactgcgcagatggtgaccagcggctcctagtttatgagtatatgctattggggtcactagaaaaccatcttcatggtaagcttctcagttctcactacgtgattttactgtttcagttcaaagtttgcacattatcaataacacttagttgattgagcttcacataacatacagaagaagaattgtgaatttcgtgacataatgggaaacattaatgtttaagttcagagacactaaaacacacctcctgaaatgtcaatgcacattaaattgatagtgatcaagttatgtccttatggttcctatcacaagatttgtgtttgtgctttagtctcaacctgctaagttgattcctgacctatttgatttgaaagagaacttgccagctacccttcactgtcttactgtagtttgctactgacaacatttaattttctttagacattgctatctatcattttataactcatggggcactttcttaatagatcgcccaccaggcaagaaacctcttgactggaatgcaaggatgaagattgctgttggtgcagcgaagggtttggagtacctgcatgataaggcaaatccaccagtcatatatagagatttcaaatcatcaaatattcttctgggcgaagactattacccaaagctatctgattttgggcttgcaaaacttggtccagttggtgacaaaactcacgtatcaacaagagttatgggaacatatggctattgtgctccagaatatgccatgacaggacagttgacagtaaaatctgatgtttacagctttggcgttgtcttccttgaactcattacaggacgtaaagccattgatcacacccaacctgcaggggagcaaaatcttgttgcatgggtaggttcatccttttatttttaagaatgtgtgggctcaactgtactaaattatctcccttcctttgggtgtagaggggatgttctgtttcaatttcatcatgatgtgaagtgtcttatccttataatttgcaggctcgtccactgtttagagaccgaaggaagttctgccaaatggccgatccatcgctgcaaggttgttatcccaaaaggggtttgtaccaggctttagctgttgcatctatgtgcttgcaggagaatgcaacatctcgacccctcattgcggatattgtcactgcactttcttatctagcttcaaatcattacgatcctaatgcaccttctgcaaagagttcgaggacttgcccatccaccccaaaggcaaaagcacatcgacgaacaaccagtgttcctgatgcccaacatgctgccgattcacttaactggaacttcccagacttggggaggaaggaaactactagaggggaattcgagcaggatcacagtgaaggttatggcagtggcagtagctctggaaggaatgatggtctagatgttccagaactgctggccttgcataatggacaaaataacagtgaagctgatatatatcacaagtccagtgtcaagcttgatgcccatgagaaacagagatcagggtcaggcaaaggcagcaggcagttttgatgcacatacaaacagacattgttgcaattctttccccgattgctgccaattttgccagacatcttctctgcttctgttgagggttggatactctttgttggtacagttgcgcgctgttatggtccaggtgctgtatgactgtacccatggttgtattttagttgtttccaaaggtatacatgaagatcatgatctggttgaagcaagaaaccatcttgtcgcagataaggagcatgcattttgatcggtgtcaattgcattctacctgtaaagatttttattctctttgtaattaggtcacagtttgtgccatacctatcattcaggaattaggatgttttatacatacagaaaacaattcttaccagaatgcgtgtacagacctacatgctacagtggattgtttgtgttttttttacatgtaacacaattattttgcggacaatgacatactgtatagaccatagagtgtatgatcatataatgtgaaagactcctgttgttagaaattt</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0668900, RefSeq:Os07g0668900