Difference between revisions of "Os08g0100700"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os08g0100700| Description = Conserved hypothetical protein| Version = NM_001067290.2 GI:297607859 GeneID:4344412| Length = 4241 bp| Definition ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os08g0100700|
 
GeneName = Os08g0100700|

Revision as of 20:43, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0100700

Description

Conserved hypothetical protein

Version

NM_001067290.2 GI:297607859 GeneID:4344412

Length

4241 bp

Definition

Oryza sativa Japonica Group Os08g0100700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:53044..57284

Sequence Coding Region

54513..54617,55351..55485,55569..57038

Expression

GEO Profiles:Os08g0100700

Genome Context

<gbrowseImage1> name=NC_008401:53044..57284 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:53044..57284 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ctcgattgtatatcatctttaggtgaaatactccatttaaatccaggatataaggctcctgaagactacaagcctttactcaaggaaacaaaaatccctttgcctagtgagattcaccaagcagacataggtgaagtgcaaggtgcttatgaagacctgtacataaatgtctcagctgacactcatgacaaagtagatgctgcgactgcactgattgagctgcttcttactcctgtctctataaattcaagggctattgaagcaaatgctactgtttcatcagcagttagctcaggcggtgcagatttagctgacctgcggcaggtgcagaacaacagttctcagccaggttttcttcagtaccaatcacatgatgctcactggctatctacttcccaagccaatgctccaccaattccttcctctgagcctccgccgagtgcattacctaacaattcttttccgcttcagcctcctggcggttctttgagtacgctttcatacacaggaccaccacctcttatgaatatcatgccaagaaacccattgcctattcctggacctcagccattggtgtcaaacgctcaacaacctccgcttcaattccaagcaaacccctcaattgggtctccctttggtagaccccctggaattgtaagcccgcaactaactccatcttccacattgccgcggtctgttagacctcttcaaacaccccatgcatctggaggatggctaaatttttcttctgttccagtgcaatctcagaggccttcaccagcttttatgccagtgagacctcctatttccgtgtctcctcttgtttcaagtccacagctggaaggtgccgctgttccatcgtttcctcgtcaatcaaatatctccacaagctatggcactcagcatcatccatcaggcgcaagctttgcatcttcagcaacaatgccttccatacctcctggtgccccccaattgtcacctcagggtccttcctcaatgccagtgctgtcgtctcctgctgggttaacaacacagccaccttatccgctgccgatgcaaatgcgtcctcccatggcaacacctgctcaaatgagaggcccgccttcacctttccctcagactgggccaactcctggcatgccacctgctggcgggtttggtgtgcctggttctggaaacatgaccgctatgaggccaccacgcccaagcagcggtgattttacctttcggcctcttgtgtcagcttcaccaacaccagagcttggagcatcaggcagtcaagtgccattattccatcctggcaaccagagaccacctatggcgcgagttgaaggtttccaaaggcctattgatatgggtcatcagggccgggcgtatgccactggtccaccgcatccacatcaacatccacatccacatgcacactttggtggtggaggcttcctcccaaggaatccagctgcatctgtgcttcaatcggcagggacaagggggtttgttggagctttccctctcccgccagcggcagttgaagcacaacggccgtttcatgtgttggcacaagcacaacagaagccaatatacgatccatttgtgccgagtggtgcagtaatgtcaggaggacctggaggtggaggaggaagaaaaaggaagacggaggatgacaaggctgagtacgaggatctcatggcgtccgttggtgtcaagtga</cdnaseq>

Protein Sequence

<aaseq>LDCISSLGEILHLNPGYKAPEDYKPLLKETKIPLPSEIHQADIG EVQGAYEDLYINVSADTHDKVDAATALIELLLTPVSINSRAIEANATVSSAVSSGGAD LADLRQVQNNSSQPGFLQYQSHDAHWLSTSQANAPPIPSSEPPPSALPNNSFPLQPPG GSLSTLSYTGPPPLMNIMPRNPLPIPGPQPLVSNAQQPPLQFQANPSIGSPFGRPPGI VSPQLTPSSTLPRSVRPLQTPHASGGWLNFSSVPVQSQRPSPAFMPVRPPISVSPLVS SPQLEGAAVPSFPRQSNISTSYGTQHHPSGASFASSATMPSIPPGAPQLSPQGPSSMP VLSSPAGLTTQPPYPLPMQMRPPMATPAQMRGPPSPFPQTGPTPGMPPAGGFGVPGSG NMTAMRPPRPSSGDFTFRPLVSASPTPELGASGSQVPLFHPGNQRPPMARVEGFQRPI DMGHQGRAYATGPPHPHQHPHPHAHFGGGGFLPRNPAASVLQSAGTRGFVGAFPLPPA AVEAQRPFHVLAQAQQKPIYDPFVPSGAVMSGGPGGGGGRKRKTEDDKAEYEDLMASV GVK</aaseq>

Gene Sequence

<dnaseqindica>1470..1574#2308..2442#2526..3995#actcctcttcacgttagtactcctcccctaccacactagggctagggaagggaagggattcgattctcctccgctccacatcaaaatcgagcaagcccaaggcggaaggcgccctgcttctccttctctgcctcaacctaccgccgagacgtaggatttccccccatcctcctcttcttctttttctttgaaaccctaacttttcttttttgctactgctagattagactagatggccgcaaaatcgaaaccctccaagatctccattttcggggccaaagctggatttctcatacccaagaacaagctccctggctcactcattgcccgttccagttccaacgccaagaatgaatcacctactgcttcttcttctgctgctgcttcctccaactccaagtccaaggaagacaacaacaacaactctactcaaagaaacactaaatggggcccggatctcaccctggatcctgccgtcagaaaatccagagcttcggcctaccaggttgcttgcttctactcctcctatttatatttgctttgctatcagtagcttgtaaaaccactatctactttgactatatgcaacccaccatgcatccctaatattattgcaatgcagcaatctttacccctaatacctagcatgacttgactctagttggatccctccatttaggcatttttaatcaatccctagaatcctctctgatattagtattattcacaaattgcctcaggcttaatgcaagttatttctgctcgccttctgttgtaagggttataactttggatcatgtgtccttcaaataaccaaccgtttctcatccttttacggggatcttgttactagacaatgaatgctaaagtaacctattgagtttcctgtaatattatcctcgtaattctctcatgctggcagcttcaattgccatatgtcattaagtcatattactgcataagcagagtcgactggagcaaattaccaaggagctgatatcgggatccctagagataagtgaaaatgaaggctcgatatctactgcaaggggctcaaactctgatggtgctaacaatgagaaagagaatgtggtactactaaacttacttaggcccccttttaaattttttcttcttttcattccctaccgtctataaactactactgatagtgtgaagcattttggatctcgtcctccattgtatcacaatttttctattgaaggcatgctggtttgtggctatgataagatatttcgaacaattatacgctcttatttgataagtctctctttcctttttcgtgtaccagcagggaatggttgagctcttggaacttgaaagaagagaaattattggtcagtgaagttttcctttcgtattgccatcttactgcttcatattttgtggggaatgtgatacagagatctgtaccatgccatgtctcaaaaatattttgtgttatttaactcgattgtatatcatctttaggtgaaatactccatttaaatccaggatataaggctcctgaagactacaagcctttactcaaggaaacaaaaatccctttgcctgtatgtaaaatattgcccctcaatgcttatttagtggtttgcatttgcatcactagttgtttccttgttcgtggacatgcttactgcttatctatttacttttacctcaagatgatcttttgtataatcttgagcttctccatgaattgttgcgcaccaagaggagtttctttctttttagttcaatttgttacagtgatttttaccagtgcttgcttggtacaaatgtgtggcagtttcagcagaatgtgtgctacagtagcgtgccatccactcatttatgatacatagtaattcatttatatctttaaacaaatcttcgtagatacaacatttggatgactaaagtatggtgcattctgtgctgttgcctattgtagacaaaaacatatccagggcataatataattggagttcttatgggacctgagagcaatgcccagaagcgactacaggaagtatgaactagacagcttatagttttattttatcgaaacttacacgataacagcactcctatatctattgggaactgattgtgtttacttttatgtatgcaggaaaccggagctaaaatacgagtatatgggattaagagaaccaacggagagaaggtaaattggttttcttgattctctgaatctttattccatgctccgttgttcaagctctacagcacatctgtctcttgtgcgtttaccttagggaacctaaaattgttatttctgctcagagtgagattcaccaagcagacataggtgaagtgcaaggtgcttatgaagacctgtacataaatgtctcagctgacactcatgacaaagtagatgctgcgactgcactgattgagctgcttcttactcctgtctctgtaagtccatcaacttggtcctcctcttgacgaattattatagtatgctttcagttgaccacctcaaatttctatctcaccagataaattcaagggctattgaagcaaatgctactgtttcatcagcagttagctcaggcggtgcagatttagctgacctgcggcaggtgcagaacaacagttctcagccaggttttcttcagtaccaatcacatgatgctcactggctatctacttcccaagccaatgctccaccaattccttcctctgagcctccgccgagtgcattacctaacaattcttttccgcttcagcctcctggcggttctttgagtacgctttcatacacaggaccaccacctcttatgaatatcatgccaagaaacccattgcctattcctggacctcagccattggtgtcaaacgctcaacaacctccgcttcaattccaagcaaacccctcaattgggtctccctttggtagaccccctggaattgtaagcccgcaactaactccatcttccacattgccgcggtctgttagacctcttcaaacaccccatgcatctggaggatggctaaatttttcttctgttccagtgcaatctcagaggccttcaccagcttttatgccagtgagacctcctatttccgtgtctcctcttgtttcaagtccacagctggaaggtgccgctgttccatcgtttcctcgtcaatcaaatatctccacaagctatggcactcagcatcatccatcaggcgcaagctttgcatcttcagcaacaatgccttccatacctcctggtgccccccaattgtcacctcagggtccttcctcaatgccagtgctgtcgtctcctgctgggttaacaacacagccaccttatccgctgccgatgcaaatgcgtcctcccatggcaacacctgctcaaatgagaggcccgccttcacctttccctcagactgggccaactcctggcatgccacctgctggcgggtttggtgtgcctggttctggaaacatgaccgctatgaggccaccacgcccaagcagcggtgattttacctttcggcctcttgtgtcagcttcaccaacaccagagcttggagcatcaggcagtcaagtgccattattccatcctggcaaccagagaccacctatggcgcgagttgaaggtttccaaaggcctattgatatgggtcatcagggccgggcgtatgccactggtccaccgcatccacatcaacatccacatccacatgcacactttggtggtggaggcttcctcccaaggaatccagctgcatctgtgcttcaatcggcagggacaagggggtttgttggagctttccctctcccgccagcggcagttgaagcacaacggccgtttcatgtgttggcacaagcacaacagaagccaatatacgatccatttgtgccgagtggtgcagtaatgtcaggaggacctggaggtggaggaggaagaaaaaggaagacggaggatgacaaggctgagtacgaggatctcatggcgtccgttggtgtcaagtgacatatgcactttctttcttgagaagagttgggatctttctttctttcttgagaagagttcatttgctactagttgactttattagactacactagactagaagagtataggatgagtaattttggcattaaaggatagtagaagagaagaatgactgaatgtttgtttgtctgttattgatcacttgtatgttttggtatattgatcgatgatgaaattaaagcatcgtaatgtcttgtttcctct</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0100700, RefSeq:Os08g0100700