Difference between revisions of "Os08g0103300"

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(Created page with "{{JaponicaGene| GeneName = Os08g0103300| Description = Similar to Tubby-like protein 3| Version = NM_001067306.1 GI:115474348 GeneID:4344429| Length = 4672 bp| Definition...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os08g0103300|
 
GeneName = Os08g0103300|

Revision as of 20:43, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0103300

Description

Similar to Tubby-like protein 3

Version

NM_001067306.1 GI:115474348 GeneID:4344429

Length

4672 bp

Definition

Oryza sativa Japonica Group Os08g0103300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:186111..190782

Sequence Coding Region

187408..187773,188260..188347,188509..188641,188741..189509

Expression

GEO Profiles:Os08g0103300

Genome Context

<gbrowseImage1> name=NC_008401:186111..190782 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:186111..190782 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtctttccgcagcatagtccgtgatgttagggacagcttcgggagcttatcaagacggagtttcgaggtgagaatttcaggcctccctggtctttctggccatcacagagggaagtcccttggatctttgagcgagctgcgtgacagacctgtagtagtagatcaaagcagatgggttggtcttcctcctgaattactccgtgatgtgatgaaaagactggaggaaggagagagcaattggccgtcccgcaaagatgttgttgcctgtgcagcagtctgccgaacatggagagagatatgtaaggatatagtgcaaagcccggaaatctgtggaaagctcacttttcctgtgtctctaaaacagcctgggcctcgagatggtttaatccagtgttttatcaaaagggacaaatcaaaattaacttattatctctacctgtgtcttagccctgctgtgctcagcgagaatggaaaattccttcttgcagctaagaggaatcgtcgggcaacttctacggaatacataatttctgtggattctaaaaacatctcacggtcaagtaatggttatgttggaaaaatgaggtcaaattttcttggcaccaaattcgttgtctacgatacacagcccccgtacaatgctgggagcctcatgtcatgtcagcatggcagccggcgaatctcttctaggagggtttccccaaagttacccaccggtagctacccaattgctcatgtgaaatatgagttgaacgttcttggcactagggggccgaggcgtatgcaatgcaccatgcattcgatcccagcctcagcagttgatcctgaaggtgtggtgcctggtcagccagagcagcttctcccaggtccattcgaggagtcgtttcgcagcacaaacacctcctccaggttctctttcatggacagatctctggacttcagcagctcccgcttctcggaaatcagtggatcagcgaaccaacagggcgaggatgatatacctgaggctaaggagaggcctttggttctacgaaacaaagtgccaagatggcatgagcagctgcaatgttggtgcctcaacttccgtggccgggtaactgtggcttctgtcaagaatttccagctgatagctgctgcgtcctctgaatcttcacagttggagcagcagcagcagcagcagcagcaaaaccatgcttcgagttcttcttcggcatccgatcatggcaaggtgatcctgcagtttggtaaggttggcaaggacatgttcaccatggactaccggtaccctctctcagcattccaggctttcgccatctgtttgaccagcttcgacaccaagctggcttgtgaataa</cdnaseq>

Protein Sequence

<aaseq>MSFRSIVRDVRDSFGSLSRRSFEVRISGLPGLSGHHRGKSLGSL SELRDRPVVVDQSRWVGLPPELLRDVMKRLEEGESNWPSRKDVVACAAVCRTWREICK DIVQSPEICGKLTFPVSLKQPGPRDGLIQCFIKRDKSKLTYYLYLCLSPAVLSENGKF LLAAKRNRRATSTEYIISVDSKNISRSSNGYVGKMRSNFLGTKFVVYDTQPPYNAGSL MSCQHGSRRISSRRVSPKLPTGSYPIAHVKYELNVLGTRGPRRMQCTMHSIPASAVDP EGVVPGQPEQLLPGPFEESFRSTNTSSRFSFMDRSLDFSSSRFSEISGSANQQGEDDI PEAKERPLVLRNKVPRWHEQLQCWCLNFRGRVTVASVKNFQLIAAASSESSQLEQQQQ QQQQNHASSSSSASDHGKVILQFGKVGKDMFTMDYRYPLSAFQAFAICLTSFDTKLAC E</aaseq>

Gene Sequence

<dnaseqindica>1298..1663#2150..2237#2399..2531#2631..3399#gctgtttctctctcaactgcttcacactgttgctctcttccctctctgcacctgcaaccaccaccacaaccatataccagtaccatcgaggaggttgccttctcttccggtcggaagcttgctttccttttcttcttcttcttttcagatccaaggttaatttcagccgacacacacaggaattgaacctgtgctcttcccaggtttctgtctgtctgcaaagttggccgctttctgcagattcatttcctttgccacgttttctgctgcaaaagttggatctttgcaagggggactggctgatttcatttgaggtttctgaataagttggggagcttgatttggagagggtaagatacggatgttccttttccttcttccgcctgattaattgattccatccctaccatctcctcctccgtctttcaggagaaattctgttttggttcctcttctcttcttgtgtccaatttggttttgcacttcgcatagaaaaatacagaaacatttatatttatccaattcatttctctagctactcaaacagcgcttcgcttctctaccctaccccttgtgcaaagttcttgcagatcttagaatttctcctcaccaacataggacatatgcaatctattgcacatcacaaagttgggataacaagagccaaccttttatcctctctagtctcagcagataaggggtcaaaattttacaacgctggtgtatgatgtaattagattatttgtaattaacgcggccttttgttggcctttcaccatcacggagttggtcgcctacgttgagatcttgtattaagtttgtgacaataacttgtactcactaaccgcggtagcccaccactttagactattcaaatgggaatggtatgctctagagtaggcttgacttaatctacatgattggattatttgtcctggattccttgttgaatgctactaatcatcttccatggtggatgctttagttttattccatggcactaactgctttgtggtcttcattgctctgacatcaccgagtaatcacttttgtccttctcaggttacttttttgggggtgatgtttcgatttgcaaatcagaacaagattacttaaggtattaccatggtgtactactgtgattttgttctccacgtactttctgattgcaggagctcagcagttgctgatgttttatcttgtgcatatgcagtgctgctaagctcaattggaagtggaagatcttggtcacgcggcatcaggtgaaagtttggtcgctgtgcatttttcacaagggatgtctttccgcagcatagtccgtgatgttagggacagcttcgggagcttatcaagacggagtttcgaggtgagaatttcaggcctccctggtctttctggccatcacagagggaagtcccttggatctttgagcgagctgcgtgacagacctgtagtagtagatcaaagcagatgggttggtcttcctcctgaattactccgtgatgtgatgaaaagactggaggaaggagagagcaattggccgtcccgcaaagatgttgttgcctgtgcagcagtctgccgaacatggagagagatatgtaaggatatagtgcaaagcccggaaatctgtggaaagctcacttttcctgtgtctctaaaacaggtaaaatcatgttcaattatatgtatggtacctttgtgtaaaactgtaaatgattacatgagatcaatcaagcacctagatatatgctaagaatgtaaagtcttaccaaagttcttgtgaacaacacatgtagtctatggatagccagccaaaaggatattctggactggggatgggtgtggggcacatcatcaccccaactccttttaaaagtgtaaagaattgtatagcttatatttcttttgccacacttgtagtgtagaacaaccaaaacgaacaaatggttgtgtttcaaatcatagcagatgctatgtttatcaggtaacactgaaattcttgtaggcaattgaaattaaagactagattctgcaaatagatgtgtcctcttatgaatgtctgcacctgtcttttattagataatggaagctttattgatctcagtcaagttatgtctgcacctgtctaactttgatttttcatgtacagcctgggcctcgagatggtttaatccagtgttttatcaaaagggacaaatcaaaattaacttattatctctacctgtgtcttagccctggtaagtatatgtaaccgcatctcttattaatatttaaatacctaccgaacattttctcagtatacatgaaagttgtcacgcatggttattcttttttccattaacattggtttagaaacatagatggatgcaatgctaataatatgatttcgatcatgtagctgtgctcagcgagaatggaaaattccttcttgcagctaagaggaatcgtcgggcaacttctacggaatacataatttctgtggattctaaaaacatctcacggtcaagtaatggttatgttggaaaaatgaggtgatgcaccatccttcactaagtgttcctgcctaacttcattaacttgagtttggcatagaaatatgcattgaaatctgacactgcaaacacaaacaggtcaaattttcttggcaccaaattcgttgtctacgatacacagcccccgtacaatgctgggagcctcatgtcatgtcagcatggcagccggcgaatctcttctaggagggtttccccaaagttacccaccggtagctacccaattgctcatgtgaaatatgagttgaacgttcttggcactagggggccgaggcgtatgcaatgcaccatgcattcgatcccagcctcagcagttgatcctgaaggtgtggtgcctggtcagccagagcagcttctcccaggtccattcgaggagtcgtttcgcagcacaaacacctcctccaggttctctttcatggacagatctctggacttcagcagctcccgcttctcggaaatcagtggatcagcgaaccaacagggcgaggatgatatacctgaggctaaggagaggcctttggttctacgaaacaaagtgccaagatggcatgagcagctgcaatgttggtgcctcaacttccgtggccgggtaactgtggcttctgtcaagaatttccagctgatagctgctgcgtcctctgaatcttcacagttggagcagcagcagcagcagcagcagcaaaaccatgcttcgagttcttcttcggcatccgatcatggcaaggtgatcctgcagtttggtaaggttggcaaggacatgttcaccatggactaccggtaccctctctcagcattccaggctttcgccatctgtttgaccagcttcgacaccaagctggcttgtgaataacatacatcagtactataagtgtgtttgtatagcgtgtcagtgtgtgtggatagtataaacatcagtcagtctcgttgtgtgcagatgcaggtgcagtttgttgttgctgttgatttagttgtctgttcttcttgtgtggcagatgtgaacaaagaatggcaacacatctcaagtgcagttgtttgctgctactacatttatatcatgtaagtatttggaggttggaagtggaacaaccccaggctcctctagtttctcgagagggtatgcatcttacttgcgaatgtgatttatctactcggtctatatatcttggtatcctttaggatcatagctgctatatgagagaagctacactgctacagcctgcatatgtgcttgaaggagccacttggaaaggaggcaatatcagttgatcgattcataggcatgcagattatgtacaattaacacttaacagtaatgaagcaccattcctgcaatcttggaaacaaatcctagatgaaaaaaaaaagaaaccttcataaactgcttaacgggagatcgttacaggaagaaccctatgatatgactgactaatcaacagcccactcaaaatcccaggaagagatggcaacactcaacatacgtcaaatgacatccggattccatttgtacacctgatgaataacaagttgttggttgtcagcaatccatgaaaacaacttcacttttcacagccacattcatgtatttgtcaacaaagtacatcaggatgttgtttcttctcaggagatgaagggagtgcagcattgccagttggcaagatctccagatctctaacctcactagaactctcaatcttagttcttgtaattgggatctcattgtctaaaccaggtgagcagtcagctctgcgatatttcacgccattgctttcaactcccaactcttcgtcacccagttcatctgaccgacgttgtgaggtcttaaggatgtcgaggcccatctcaagatcatcctcgactttggctcgtggacggtggggtgtctcctcttctgctacattggaacggctgattcgtggtggtgctaccccatggtcctcttgaacaattgctctcaggttgatccttgaaggcgctcttttggtgcagaagaattcagaacagttgttcatgcaaccacggtcaaacacgttgggttggttgttgtatttgtacttgaggttctcatatgttgtcttcaaaaaaggaagtggaaattcaattcagatcatagttttcaatttttc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0103300, RefSeq:Os08g0103300