Difference between revisions of "Os08g0113300"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os08g0113300| Description = Similar to Clone ZZD1296 mRNA sequence| Version = NM_001067374.1 GI:115474484 GeneID:4344499| Length = 4526 bp| Def...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os08g0113300|
 
GeneName = Os08g0113300|

Revision as of 20:43, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0113300

Description

Similar to Clone ZZD1296 mRNA sequence

Version

NM_001067374.1 GI:115474484 GeneID:4344499

Length

4526 bp

Definition

Oryza sativa Japonica Group Os08g0113300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:714643..719168

Sequence Coding Region

718591..718707,718790..718915

Expression

GEO Profiles:Os08g0113300

Genome Context

<gbrowseImage1> name=NC_008401:714643..719168 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:714643..719168 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcaggttcctgatcatctctgctgcaaaattactcttgatattttcagagacccggtgataaccccaagtggaatcacgtatgagagggcggtgattcttgatcatcttcatagggtggggaagtttgatcctgtgacccgtgagacacttgaaccacaccaactggttcctaaccttgccatcaaggaagctgtccatgcatttttgagtgaacatggttgggcttacaggatgagatga</cdnaseq>

Protein Sequence

<aaseq>MQVPDHLCCKITLDIFRDPVITPSGITYERAVILDHLHRVGKFD PVTRETLEPHQLVPNLAIKEAVHAFLSEHGWAYRMR</aaseq>

Gene Sequence

<dnaseqindica>3949..4065#4148..4273#acgatcttctagaagcgattcgcgcgcgccgccgcctcctcccctccccttccccggagcgaagccgccccgccgggggggatgtcgccggcggcggacagcgcggcgtcgaagcggcaggcggagctgctcaagcaggagggcaacgccttcttcaagaaggaccgcatcagcgccgccatcgacgcctacaccggggtaaggttcccgccgtggcatcgcccgcgtgattcgtgccgtcctaattcttcgaaccaaccaacatttggacccttcaggccgccccgctatatcagcatgttatacagtaaattccgtgaaagcttgtgaatctccctattgtaatatcatgtcaattgcatactggattaccctggctgcttctcgggctccggattaaccctgcttcggcgacgagtagctggtctagataattttcgttagtttgttgatgtgcctggttctctgaaacatgcaagtctatgtcattgcctgctgacgtgtgcttgcttgcttgtgggcagttgagtgatgcttttgcacatagattcctgcctttccttttagttagttgagaattgccgctttgtgcggtgccatcacatcgatgagacgatgagcaaggaaatttctcaacgatgaacatccttatttttaatttagctaataccgatgcactgtaaagggtttgctgggagaggggagggattgtttgagagtggatagacatattggtgtttatgtaccatgctgtactagtctagttcagagcgtgaaaattactgcctctttgtattgtttaaggtaaaggctacaatttagttctagattatccctcttgtttggcctctttacatcatggtggtggcggcgataaaaacatgtatcagctgacttagtcgacgacagattatatggaagcactcaagacttcttcttcttttcttttttttttttttgtagaaagcctgtacaatttgcaccttccatgctaattgcagtctctattttggttgacaggccatagctctctgcccaaaggttgcagtatattggaccaaccgagcactttgctacaagaggcggaagtctgtataactattatttcctcttctttttttttgctgcacattgggagcaattgattcacatttatgttgcttacaccatactttgccaatctgagttttgcagtgagtgggttagggctgaggaagattgtagaacagctattcagcttgacagccactctgttaaggttggtgtatttacctatctttaacaattattgtctggacttgttttcttgcaactatctcctggtgatgtgtgctctactaaattaacaagtgacaacttttgctttaaggacataaattttcttttagagatactgaattccattttctatctctgttacttcttgaccaaatatgttacaatttttttgtttatttcctgtttgagaaacactaatgacatctacctgctagttgatttagtctcaacttgttattgcattgccttttggagggaccctttaattttctgttctttaaacacacctacctaacatcctctaatctagatttaaaacaaaattatgttaccccctctgttttgcattttttgtccatggcccactgcaagcacacactaaggaatccttgttaagatgctgccgcagatggattacttcctcgctcattgagaaagatttcagagcctcctagattgattgatgctggagtgtatggacaatagttttggtcttgttgaggtttctggggttttgggtatctatggttggtgttttggtcctgcacagacacatgcttggccatgctcttgttttgggttatgttgttttttctgaagtacgccttgtgatgtgtcttgtatgcacttcatggtctgtaagcattacttcttgttcttggatttgatgcctggggagctgtgcggctgtgccctttgaatctaaaaagcagaagttaatgatagaacaccttgcatacccctaccaaattcataatacaaccaatttacctctttcaaagtatttcattaggggcagagagtgaaaaatttgcaataactatgtcttgatctcctcaacgagcacacactttgaaacacatattactggaaatgggatagttttcattagacattactgactagatttgcacttaaacatagatatggcaaactggacattaatcatattaacatgcagatgttgcctgctgtttaccccttagtttgaatataaagtgcatactcttttgctcaattagttttgaattttccgcaaatatgatttatccatgtcttatgaagggctcacatagttttatgttatgttttatttgtatgttactccacttgggaatagggtcctccaattatagcaaaatgacctttagagccattgatcttgttacttgttagcacttgaacatgaggtggatttatgctcatgtaactcataactcaataattagcttatcttgtttggctcatgtggcttgaatcgagtatttcacattttacagacctgatttagcaaccaacagggtagaaatccctccttttgatactggttatatttaaagctcttggacagttggacgaatgggggcatcacctcaaactatagaaaaatgtcctaagatacatcagcagttcaattcaaaatatgaattttacatattataaggggaccctactgcgatgatttactgatatcatgttcattaagatatgcttctagtgcctaagaattgaaagtacgttactatttcaggatgctttggtgtccttattaaaggtagaaactagaaagtaagacattttatattgagtaaaatttaaaatgcatttttgtggagtcaggagaaagaacttgtctgttctttgtttcctttgatccatcttaacccacttttggtatagccagtttgaaatgggcttgaacttaaagcgaaactttagatgcctctgcaggcaacagatgtattttctctagttgagcttaataccatcttatcttgttctttacaatgctaatacctctagttacctgactttcttcaactcattgattttttgcaggcacattacatgctcgggcttgcacttctcaacaaggacgaattggccgagggaataaaagaactagagaaggtctgatttcacactcagtcacaagtccacacacatgcacacacttgagtaataatgttatgatggtctgattttgccttaagccttttttttgctcctccttcctcctacaaatgctaacacagccacgatgttgatttggagcacaaaattgaattatgattttaaactgtcttaagaatagttgaactggcaatgccaacagaaacaggaaaatacaatttcatacgggatctacttgttttttgtgcttgttcttcttgatgatgctattttagttacaactcaaattctgcttacgccattttactgatgatccaatctttactaacccagtcgttggagcttggaaggggtgcacatccagcaagttacatggttgaagagatctggcaagagctttctaaagcaaaatacatagaatgggaaaatttatcaagcgaacgagtccgtcaattgcataagctgaagtttgtgaaaaccttttccatacattactcaatcaatatgacagagatataatgccctaattaaatagtgttttcccttttccagggaagcatgtaaagaagctcttaggaattataacagccttgacaatcctcctgcatatgtccccgaggaacagctaaatgagcttgaggaagtttttcggaatgccaggaagtctgatattccaacagaagtacaacctgcctttgacactgcttacttccgtgccctgactggcttaatctgaaaagaaaagaactattttatatgcaggttcctgatcatctctgctgcaaaattactcttgatattttcagagacccggtgataaccccaagtggaatcacgtatgagagggcggtgattcttgatcatcttcatagggtaattgacagaggcaataaaatgtctttgaatgtatttttgctttgcttacaaaacttacgatgagctttcaaattcgtaggtggggaagtttgatcctgtgacccgtgagacacttgaaccacaccaactggttcctaaccttgccatcaaggaagctgtccatgcatttttgagtgaacatggttgggcttacaggatgagatgactactttgaattacacctgggcttggagctttggaggcaacatttcagattgcaatatacatgtttcggttagtcaacttaaatgtgtcattttgtttatctttacatatttattggtggaaaaggttttacctgggatggctgtgtacagattccccttctctagctatccctcctctctactctgttcatgtgtaatgcttggtatcagattatcacttatccacagtaaaagaaaattaaagtggctgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0113300, RefSeq:Os08g0113300