Difference between revisions of "Os08g0116900"
(Created page with "{{JaponicaGene|
GeneName = Os08g0116900|
Description = Similar to Avr9 elicitor response-like protein|
Version = NM_001067392.1 GI:115474520 GeneID:4344520|
Length = 3553 ...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os08g0116900| | GeneName = Os08g0116900| | ||
Revision as of 20:43, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os08g0116900 |
|---|---|
| Description |
Similar to Avr9 elicitor response-like protein |
| Version |
NM_001067392.1 GI:115474520 GeneID:4344520 |
| Length |
3553 bp |
| Definition |
Oryza sativa Japonica Group Os08g0116900, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:939840..943392 |
| Sequence Coding Region |
940148..940296,941092..941201,941277..941402,941786..941873,941985..942105 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:939840..943392 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:939840..943392 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgttcgcgccggcggccgcggcgaggccgcacaagcaggcgccgctggcgcgggtgcccacgcggctggtggccgcgctctgcaccgcctgcttcttcctcggcgtctgcgtcgtcaatagatattgggcggttcctgagcttcccgattgccgaaccaaggtgaattcggataatccgggggctgtaatgaaccaagtgtcacaaactcgggaagtcatcatagctttggatagaacaatatctgaaatcgagatgcgcctggctgctgctagaaccatgcaagctaggagccagggcttatctccgagtgattcgggtagtgaccagggaagcaccagggctagattgttttttgtcatgggcattgtgaccacgtttgctaatcgcaagcggagagactccatccggcagacatggctgccacaaggcgagcatttgcaaaggctggagaaggagaagggcgttgttatccgttttgttatcgggcgcagtgcaaatccaagtcctgacagtgaagtggagcgtgccattgctgcagaagataaagaatacaatgatattttgagacttgatcatgttgaacgaaatggcagtcttcctttgaagattcagatgtttctgtcaaccgctctttccatttgggatgctgatttctatgtgaaagttgatgacgatgttcatgtcaacataggtattaccaggtcgattttggcacggcacagatcaaaacctcgggtgtacattggctgcatgaaatctggacctgttgttgataaaaatgaatctaagtattatgaaccagatcattggaaatttgggactgagggtaacaactactttaggcatgcaacacgacaattgtatgctgtaaccagagatttagcaacctacatatcagcaaatcggcatatcttgcacaaatattcaaacgaagacgtgtcatttggttcttggttgattggattggatgttgagcatgtggatgagagaagcctttgctgtggcactcccccagactgcgaatggaaggcgcaggctgggaacccgtgcgcagcgtcattcgactggaactgcaccggcatctgcaatccggtggagaggatggaggaggtgcaccggcgatgctgggaaggtcatgtggccgatttgcaggcacagttttga</cdnaseq> |
| Protein Sequence |
<aaseq>MFAPAAAARPHKQAPLARVPTRLVAALCTACFFLGVCVVNRYWA VPELPDCRTKVNSDNPGAVMNQVSQTREVIIALDRTISEIEMRLAAARTMQARSQGLS PSDSGSDQGSTRARLFFVMGIVTTFANRKRRDSIRQTWLPQGEHLQRLEKEKGVVIRF VIGRSANPSPDSEVERAIAAEDKEYNDILRLDHVERNGSLPLKIQMFLSTALSIWDAD FYVKVDDDVHVNIGITRSILARHRSKPRVYIGCMKSGPVVDKNESKYYEPDHWKFGTE GNNYFRHATRQLYAVTRDLATYISANRHILHKYSNEDVSFGSWLIGLDVEHVDERSLC CGTPPDCEWKAQAGNPCAASFDWNCTGICNPVERMEEVHRRCWEGHVADLQAQF</aaseq> |
| Gene Sequence |
<dnaseqindica>3097..3245#2192..2301#1991..2116#1520..1607#1288..1408#1120..1198#890..953#601..806#460..521#331..370#37..158#gaatccgagaggaggaggaggaggcggcggccggcgatgttcgcgccggcggccgcggcgaggccgcacaagcaggcgccgctggcgcgggtgcccacgcggctggtggccgcgctctgcaccgcctgcttcttcctcggcgtctgcgtcgtcaataggttggttcgctgtccgctccccaaatccgctgctctcctcttgctccatgctcccgcacccgcttcggtgctgtctaggcaatctcttctcctcgccacacgaatcgagacaatgctcgtcggttttgaggctgggaatggtgattttttgctcgtctggttggttttgcagatattgggcggttcctgagcttcccgattgccgaaccaaggtaatttatcatgttgtatccattatttttctcttaattgctgtgttaatgtggatgcggtacaatgtcgtctggtcggattttgccaggtgaattcggataatccgggggctgtaatgaaccaagtgtcacaaactcgggaagtcatcatgtatgtaatgtctgaagcttatgcagtcagaattagtttagattgatgtttaggtttgcttatactacttgcgctgcagagctttggatagaacaatatctgaaatcgagatgcgcctggctgctgctagaaccatgcaagctaggagccagggcttatctccgagtgattcgggtagtgaccagggaagcaccagggctagattgttttttgtcatgggcattgtgaccacgtttgctaatcgcaagcggagagactccatccggcagacatggctgccacaaggtattgtatatttgtataacccttttctgtgtaatgcatcacagaggttttgctccatacctacctaatttgacactgtccaggcgagcatttgcaaaggctggagaaggagaagggcgttgttatccgttttgttatcgggcgcaggtattgtctagtttaggcctggggaaaaataatgagtgttgtatcaaacattatggtcttgttcctcttcttgttaatataatgacataatgtccccgataaaaaagggaaaatagtcggtgttttcacttactgtaccgctgaatttgggccttgcttcttgtagtgcaaatccaagtcctgacagtgaagtggagcgtgccattgctgcagaagataaagaatacaatgatattttgagacttgtatgctggctcttctagtttcaattttcctgtttttgagcaatctattgataatattgaagttttgacacagcggtcatccttaccaggatcatgttgaacgaaatggcagtcttcctttgaagattcagatgtttctgtcaaccgctctttccatttgggatgctgatttctatgtgaaagttgatgacgatgttcatgtcaacataggtatgccaacccaggaccattctttaaagtttggctgttgtggttttgttttgaagatattctgatgtatcaatgatagcatatagtaaggttgtccctctttcatcacaggtattaccaggtcgattttggcacggcacagatcaaaacctcgggtgtacattggctgcatgaaatctggacctgttgttgataaaaagtaacactccagaaaccttgcaatttttttttcagttaattaaacagattggtaaatgtgctaaatgagaacttcgatcaaaatagaatgcaaacatatgatattactgcctgattgtgtgagggagtatcatccattcaaatgggaacttagtcttgctactttctaatgttgcaaaagctagcctttatagtgttccaatagaagctacactcatctcgttttatgtatttgacaaatataattcaactgatagataatcaataacacaagttcacaacttcacattctcctaatataaggatacatcttactatatatgcttatgttaacaatgtttatttctcaaaatgtctaatgaagcgcttgcctgatgtcaacagtgaatctaagtattatgaaccagatcattggaaatttgggactgagggtaacaactactttaggcatgcaacacgacaattgtatgctgtaaccagagatttagcaacctacatatcagcaaatcggtgagttctaatttggatatgcaagattggattatgttacttctccatttcatatttgtttgattttactttcaggcatatcttgcacaaatattcaaacgaagacgtgtcatttggttcttggttgattggattggatgttgagcatgtggatgagagaagcctttgctgtggcactcccccaggtagttgtcttactttagtatcgatttccatgttacctcagcatattctcctattgcatctctttatcttttgtatgctcaacaatgacatgatttcactcaacctggacgttgcatgtaatcatattaagtagttgatcaaagcttttctttttcattttttctaccaagaaaaagatgacatgcatgtcttaacaactaccatggcggttagcacctatcttcaataattaagacgcgagactctttttagcctttttaccacctttctgatccctgctgttctgaaatgatagttgggcattatactcaaaccagcttgttgacattttgaacaaatatttgaaagcatctattttttattcatcagaatgctgctggctgtctggcacttagcagtagttggttactcttaactgaatgacctcacaataatatgatgccgatgccaattgtttacagatgtcctcacagtgaatgtagagctaatttctgctgcagttattctctttgcaatttgcgcttcagaaggcatggacacattgttgtatcgtctcatcatccaaagtttgaaattgttactatttgcgcagttcgtctatctttggaacatatgccatcgatatgccccaccaatcattacagtcagctctgataagagtggcaatgcttttgagatgcacctaagatcatctcagccatcataagcatccagcatctacttacctgtcatatgtttcaaagccctccagttgacccttcagatacattcatgtggcatgtttggtcttgcagactgcgaatggaaggcgcaggctgggaacccgtgcgcagcgtcattcgactggaactgcaccggcatctgcaatccggtggagaggatggaggaggtgcaccggcgatgctgggaaggtcatgtggccgatttgcaggcacagttttgacaaccaatgggtggtagttcaggcatcctcatagtattgttttctctgaacccaacatgtaaattgctcgggagaacgaaattgttatgcaatgcagtggttagttttttcaggtgcgccctgtggttggcatcttttcctggctagtttgcaatgcattggttgaaacttaaaatgggaggaaaagaaaaaaaaagataaatgtaaaaatatgtccaaatgcctgatattcatgtatacaatccaaggcatcatttgaaacacaggaactttataggattttcataggagctaaaacaagtatttag</dnaseqindica> |
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