Difference between revisions of "Os08g0130000"

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(Created page with "{{JaponicaGene| GeneName = Os08g0130000| Description = Putative DNA binding domain containing protein| Version = NM_001067454.1 GI:115474644 GeneID:4344586| Length = 2611 ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os08g0130000|
 
GeneName = Os08g0130000|

Revision as of 20:44, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0130000

Description

Putative DNA binding domain containing protein

Version

NM_001067454.1 GI:115474644 GeneID:4344586

Length

2611 bp

Definition

Oryza sativa Japonica Group Os08g0130000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:1680536..1683146

Sequence Coding Region

1680536..1680786,1680867..1681131,1681250..1681329,1682339..1683146

Expression

GEO Profiles:Os08g0130000

Genome Context

<gbrowseImage1> name=NC_008401:1680536..1683146 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:1680536..1683146 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggccgcggccggcgccggcgagccgtcgccgtacgcggaggcggcgggatccgacctcgcgaatgcgcgggcgccgtctcccgtggtcggcaagcacctcccgtcgggcgccgtgccgcgccacgcgtacgtgttcgacggcgagggggggttcgccgacgcggcgtgggacgtcgcggcggcggcgccgggggcgttcacgtggcaccacatcgagctcccgcggcagcagcccgggggcgccgccgcgaagccgctccaccacgcgcaggcgctgatcgagctgctctgcccgccgctcacgctgcaggagatcctcgcgttcgtcgccacgggcccgcactgcggcgtcgtggacggcggcggcggcggcggggcgggcgcgctccttctccgcgtgagctcgccggggccggtggggagcgcgttcgcgctccgcctcgccgcgcgcgtcacggacagctccgtggtgaccgtgtccgtgggcggcgtcccgcgcctcgcgttcgggaccacgcaggcgtcgctcctctccgaggtgccgctcggggtgaccgcgtcgctctccgacgagggccacggcggcgggcgcgccgtcgagggcggggtggtgatcgaggagcggctgctcgagtcgctgctcgccatgaaccacgccgacggcgcgcacaccgacaaccccgtgccgcggaccgtgtccaacctcctcgtgcacgtcctgggaacgcacgtagaccacgtccacgacatcgtcacgcgcctcgagatggagctcgacagcatcgagctgcatctcgacaagggtggtcactttatgaggaaacttttgttggatggaaggagattccccaaaatgcatcttgatctacagcgcctgcttcaggttgtttctcatggtgaccaagtattcccccgtgtaaaggaaaaatgtgcgagcaagagttggtttgcgagtgaagatattgttgctcttgaagatctgataggccgtcttaggaggctgaaggaaaatcttggatttataacgaatagggtgactacacttcaagctagtctagatagctggcaatctgagcagataaacaaaagcttgtactatctttcatttttgtccataatattccttcctctatccattgtcactggagtttttgggatgaatgttggtggtgtgccatggactgagcagaaaaaccctgcaaatctagatggcttcttcaatgtcatgttaatatgcgtcgtgatcttgttgatcctgctgctttgtttcttatttccttcattgtattcacacgtgtcggcatggagaacccgccgtgcactggcccggagcagttctcagaacaagagacatctgaaactctttaagggtcacaaagatggttacatgcgcctctga</cdnaseq>

Protein Sequence

<aaseq>MAAAAGAGEPSPYAEAAGSDLANARAPSPVVGKHLPSGAVPRHA YVFDGEGGFADAAWDVAAAAPGAFTWHHIELPRQQPGGAAAKPLHHAQALIELLCPPL TLQEILAFVATGPHCGVVDGGGGGGAGALLLRVSSPGPVGSAFALRLAARVTDSSVVT VSVGGVPRLAFGTTQASLLSEVPLGVTASLSDEGHGGGRAVEGGVVIEERLLESLLAM NHADGAHTDNPVPRTVSNLLVHVLGTHVDHVHDIVTRLEMELDSIELHLDKGGHFMRK LLLDGRRFPKMHLDLQRLLQVVSHGDQVFPRVKEKCASKSWFASEDIVALEDLIGRLR RLKENLGFITNRVTTLQASLDSWQSEQINKSLYYLSFLSIIFLPLSIVTGVFGMNVGG VPWTEQKNPANLDGFFNVMLICVVILLILLLCFLFPSLYSHVSAWRTRRALARSSSQN KRHLKLFKGHKDGYMRL</aaseq>

Gene Sequence

<dnaseqindica>2361..2611#2016..2280#1818..1897#1..808#atggcggccgcggccggcgccggcgagccgtcgccgtacgcggaggcggcgggatccgacctcgcgaatgcgcgggcgccgtctcccgtggtcggcaagcacctcccgtcgggcgccgtgccgcgccacgcgtacgtgttcgacggcgagggggggttcgccgacgcggcgtgggacgtcgcggcggcggcgccgggggcgttcacgtggcaccacatcgagctcccgcggcagcagcccgggggcgccgccgcgaagccgctccaccacgcgcaggcgctgatcgagctgctctgcccgccgctcacgctgcaggagatcctcgcgttcgtcgccacgggcccgcactgcggcgtcgtggacggcggcggcggcggcggggcgggcgcgctccttctccgcgtgagctcgccggggccggtggggagcgcgttcgcgctccgcctcgccgcgcgcgtcacggacagctccgtggtgaccgtgtccgtgggcggcgtcccgcgcctcgcgttcgggaccacgcaggcgtcgctcctctccgaggtgccgctcggggtgaccgcgtcgctctccgacgagggccacggcggcgggcgcgccgtcgagggcggggtggtgatcgaggagcggctgctcgagtcgctgctcgccatgaaccacgccgacggcgcgcacaccgacaaccccgtgccgcggaccgtgtccaacctcctcgtgcacgtcctgggaacgcacgtagaccacgtccacgacatcgtcacgcgcctcgagatggagctcgacagcatcgagctgcatctcgacaagggtaggtggaggttgctttcttgactagtaatcgcatataaacataaatcaaattattagggttctaagaacatctccattcgttagacaaagttggtgccctttttttcccttttctggtgatgttgttaggtaggacgaactagcttcttcgttacgtctgttgttcatgattatgcacgagagaaatttattgtgctttgctttgttctatgggctcattggattacactaaactggaagtctaaaaattgggaatttgtcgaaaattatcgattctgttgtgattgtccatccgcattggggcggcaacttgatgaaaaactcctatgattggaaggaggttgctgatgctattgaattgattcttgattgttactgttccatggagaagttccaattccatattcgtgcttaaattgattctgaagcggtgtatttccttttagaggtgatttcgggtgtgtttagttcccaccaaaattggaagtttggttgaaattggaacgatgtgacggaaaagttggaagtttgtatgtgtaggaaagttttgatgtgatggaaaagatggaagtttgaagaaaaactttggaactaaacccagccaataaattataaatttggggtgaagtaaggtcagagaagaaggaaaggtcatcaatttatagtttgttatgtatggtggaatgaaatttctgaatgtcatgttggcagcaaccgtatttcctgaaatgccatgattatattgctagctgtgattccagatgggattcatttcacatgatcagtatgtgcaacagaatattttctgagatggatttctcacgtagtctatggatatctgttctacttctacataggttaatgtcaatggaagtcaatgtgaagtctagtttatttactactagccaaacttatgctcaaatttgttatagcattctgcagatgttattctttctcttaatgggctttgaaggtatttatgatatttctgtgaatcttgcttgcaggtggtcactttatgaggaaacttttgttggatggaaggagattccccaaaatgcatcttgatctacagcgcctgcttcaggtattttctgagatttatctcaaattgctaaaatggagttcaatgtatgagtatgttattgttcactggatcgggaacgcataatagaagtcatgggctttaatgatttcttgcctaggttgtttctcatggtgaccaagtattcccccgtgtaaaggaaaaatgtgcgagcaagagttggtttgcgagtgaagatattgttgctcttgaagatctgataggccgtcttaggaggctgaaggaaaatcttggatttataacgaatagggtgactacacttcaagctagtctagatagctggcaatctgagcagataaacaaaagcttgtactatctttcatttttgtccataatattccttcctctatccattgtcactggaggtatgttcccatgcgtatttctgatgccatttattgcttaaggtctccaatttacatgatctgctgcaatgtttgtgcagtttttgggatgaatgttggtggtgtgccatggactgagcagaaaaaccctgcaaatctagatggcttcttcaatgtcatgttaatatgcgtcgtgatcttgttgatcctgctgctttgtttcttatttccttcattgtattcacacgtgtcggcatggagaacccgccgtgcactggcccggagcagttctcagaacaagagacatctgaaactctttaagggtcacaaagatggttacatgcgcctctga</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0130000, RefSeq:Os08g0130000