Difference between revisions of "Os08g0143500"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os08g0143500| Description = Glycosyl transferase, family 14 protein| Version = NM_001067512.1 GI:115474760 GeneID:4344645| Length = 3251 bp| De...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os08g0143500|
 
GeneName = Os08g0143500|

Revision as of 20:44, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0143500

Description

Glycosyl transferase, family 14 protein

Version

NM_001067512.1 GI:115474760 GeneID:4344645

Length

3251 bp

Definition

Oryza sativa Japonica Group Os08g0143500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:2388732..2391982

Sequence Coding Region

2388925..2389567,2390101..2390176,2390289..2390404,2391304..2391869

Expression

GEO Profiles:Os08g0143500

Genome Context

<gbrowseImage1> name=NC_008401:2388732..2391982 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:2388732..2391982 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggaagagctgggggctcgggcggccgtcgggtgaccggcggtggctgctccccttcgccgcgagcctcctcgtctcggcgaccctcttcctcgccgcggcatgcggcctcttctccccgccctctctcgccgacggcgacgacgactccatcctcatcgacgtcgccacctgggacaccgcctccgccgcagaatccgagatcaagaaccgcctcctcgactccaactccgactccgacgacggcgacaacccggacgacgcggcggtgaactcggacgcctcctccgcggatcccccgcggatcgcctacctcctggagggaaccaagggggacggggcgcggatgaggcgggcgctgcaggcgatctaccacccgcggaaccagtacatcctccacctcgatctggaggcgccgccgcgggagcggatcgacctggccatgtacgtcaagggggacgccatgttcagcgaggtcgggaacgtgagggtcatcgccaagggcaacctggtcacctacaaggggccaaccatggtggcctgcacgctgcacgccgtctccatcctcctcaaggagggtctggagtgggactggttcatcaacctcagcgcctccgattaccccctcgtcacgcaggatgatatacttcatgtgttctcttccttgccgagaaatcttaattttatagaacacatgcaactatctggttggaaagtgatttcaagagcaaaacctattgttgtggacccagggctctatctatcaaaaaagttcgatcttaccatgactactgagcggcgagaattgccaacatctttcaagttatatactggttctgcttggataatgctcacaaaaaccttcctcgagtactgcatatggggatgggacaatctcccacggacactccttatgtactatgttaacttcatctcctctccagaaggttatttccacaccgtcatctgcaactcggacgagtttcggggcactgcggttggccatgacctgcactacattgcttgggactaccctccaaagcaacatccaaatatgctctccatgaaggacttcaacaagatggtcaagagcggcgcgccgtttgcacggaagtttcccaaggatgacaaggtcctggacaaaatcgaccgtgagctgctgcaccgctccgaaggccagttcacccccggagcatggtgcgacgggagctctgaaggaggagctgatccatgttcctcaaggggtgaagattcggtattcgagcctagtcccggtgccgagaggttgcgaggcctcatgaagaaggtgctttcatgggattaccgcaatggcagctgctcgtcgctcggttacgatcagacaaaacgagattggtatgttccaaaaggtagaggataa</cdnaseq>

Protein Sequence

<aaseq>MRKSWGLGRPSGDRRWLLPFAASLLVSATLFLAAACGLFSPPSL ADGDDDSILIDVATWDTASAAESEIKNRLLDSNSDSDDGDNPDDAAVNSDASSADPPR IAYLLEGTKGDGARMRRALQAIYHPRNQYILHLDLEAPPRERIDLAMYVKGDAMFSEV GNVRVIAKGNLVTYKGPTMVACTLHAVSILLKEGLEWDWFINLSASDYPLVTQDDILH VFSSLPRNLNFIEHMQLSGWKVISRAKPIVVDPGLYLSKKFDLTMTTERRELPTSFKL YTGSAWIMLTKTFLEYCIWGWDNLPRTLLMYYVNFISSPEGYFHTVICNSDEFRGTAV GHDLHYIAWDYPPKQHPNMLSMKDFNKMVKSGAPFARKFPKDDKVLDKIDRELLHRSE GQFTPGAWCDGSSEGGADPCSSRGEDSVFEPSPGAERLRGLMKKVLSWDYRNGSCSSL GYDQTKRDWYVPKGRG</aaseq>

Gene Sequence

<dnaseqindica>194..836#1370..1445#1558..1673#2573..3138#ctcctagcttcactctctccgctgctgctgctgcgttcggtagctaagcttagcttagcttgcgagctgcgtcgcctagctccgattggatctcgctctcgagctcgagctcgagctcggattccatggcgaattggtgactcggtggcaaggtcccgtctcctggtgtctggaattgggcggcggcggcgggatgaggaagagctgggggctcgggcggccgtcgggtgaccggcggtggctgctccccttcgccgcgagcctcctcgtctcggcgaccctcttcctcgccgcggcatgcggcctcttctccccgccctctctcgccgacggcgacgacgactccatcctcatcgacgtcgccacctgggacaccgcctccgccgcagaatccgagatcaagaaccgcctcctcgactccaactccgactccgacgacggcgacaacccggacgacgcggcggtgaactcggacgcctcctccgcggatcccccgcggatcgcctacctcctggagggaaccaagggggacggggcgcggatgaggcgggcgctgcaggcgatctaccacccgcggaaccagtacatcctccacctcgatctggaggcgccgccgcgggagcggatcgacctggccatgtacgtcaagggggacgccatgttcagcgaggtcgggaacgtgagggtcatcgccaagggcaacctggtcacctacaaggggccaaccatggtggcctgcacgctgcacgccgtctccatcctcctcaaggagggtctggagtgggactggttcatcaacctcagcgcctccgattaccccctcgtcacgcaggatggtcagtgctctgattactctgctgaatgaattttagcttactttgtgtgttgtgcttgttctagaatgtagagatgttttgttaattagctatgaaatgccaccgaatttgcctctaggattgtctacttgatgacaaaggatggtcagtgttcttcaggtcagctgaatttcaattacatattgttgtgtttgttctaggatgtggagatattttcttagctatggagtgccactgaaaagattggaatttaggatttgcctctaggatagcattgttgagggcagcaattagcatctgtgtaactgtaatggttaaattcgttgtgtaagctatagcctatctgatagctcaactagatttctttgcattggcatcagttatgtagagcttgctagctactattagcaagcttcagattcaggaaaatgaaagtgtgctgtaatgaaagctttaatcctcattgaggatattgcaacattcagtggcattgtataagtatttgcatggctaaacgttatttttctctgcagatatacttcatgtgttctcttccttgccgagaaatcttaattttatagaacacatgcaactatctggttggaaagtgtaagtttccttctagtcttcagtattttcaatttttttcacgttatctagttctctctacttttgattatccagattacttgttctgatgctttatgtggttttctcacaggatttcaagagcaaaacctattgttgtggacccagggctctatctatcaaaaaagttcgatcttaccatgactactgagcggcgagaattgccaacatctttcaagttatatactggtgagcatgtttctgatttctatatgtcttacttggcatattagaaagctattatgattctgcccacaagttaacgatgcattcatgcagcgattggcatgggtatggaatctaaatatttatgatactattattccaaactgacctttgaatagtgctggtttgtaagtaattacttcatggtagcagacagtagcgttgaatacttgattgaccaatattgattgcaatagaccatttcttattgttagcattagtgtgtgtcctcttgcttttcactatgtccacatgccctcttatgtttgcgaaaataaataagtagacattatttgcaaaaataaataagtagagggagagagagagaacagaggatttttgttgttgttgttttgagttaaaacagaggatgttggattgaagtatcaatcttgacatcggagttatcaataattttcaaagcaagcccttacagtttagaatgcaccaagatgttttgaaatgagctacttttcctgttgaccacaatatggcttcatttcctgcttgcttccttcctgtcatcattttttgtttgactagatctggtattccgatgaaatggcagatcaaatcttccattagcactgacaaaataagaagtttgatctctctgttcaaaacgcctaggagtgatgcagaataaacaaatgctctatgtgaagtgtaagggcgttatgcagtttttagcaaacatatttctatttcggttgtgaaatcaaaatattgtttttattaattacctgtttatacgagaggcacatcagcatcattctatcttgtacgcgttacatgtttcctgatacaaaacacacaagactcttaaatgtatcttaacatcagagtcgtctttttatcgacaggttctgcttggataatgctcacaaaaaccttcctcgagtactgcatatggggatgggacaatctcccacggacactccttatgtactatgttaacttcatctcctctccagaaggttatttccacaccgtcatctgcaactcggacgagtttcggggcactgcggttggccatgacctgcactacattgcttgggactaccctccaaagcaacatccaaatatgctctccatgaaggacttcaacaagatggtcaagagcggcgcgccgtttgcacggaagtttcccaaggatgacaaggtcctggacaaaatcgaccgtgagctgctgcaccgctccgaaggccagttcacccccggagcatggtgcgacgggagctctgaaggaggagctgatccatgttcctcaaggggtgaagattcggtattcgagcctagtcccggtgccgagaggttgcgaggcctcatgaagaaggtgctttcatgggattaccgcaatggcagctgctcgtcgctcggttacgatcagacaaaacgagattggtatgttccaaaaggtagaggataattcatgttgtcctggtaccttttcttgtaaattcagatagctgaacttgaccccttccattgaaatgaacaaagctgatgaatccaacattctgaccaagaaaaaagatgttg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0143500, RefSeq:Os08g0143500