Difference between revisions of "Os08g0162100"
(Created page with "{{JaponicaGene|
GeneName = Os08g0162100|
Description = Similar to CTV.2|
Version = NM_001067590.1 GI:115474916 GeneID:4344728|
Length = 8681 bp|
Definition = Oryza sativa...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os08g0162100| | GeneName = Os08g0162100| | ||
Revision as of 20:44, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os08g0162100 |
|---|---|
| Description |
Similar to CTV.2 |
| Version |
NM_001067590.1 GI:115474916 GeneID:4344728 |
| Length |
8681 bp |
| Definition |
Oryza sativa Japonica Group Os08g0162100, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:3666095..3674775 |
| Sequence Coding Region |
3666651..3666730,3666841..3667020,3667104..3667217,3667322..3667480,3668185..3668365 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:3666095..3674775 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:3666095..3674775 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgtcgtcgcttagcagggagctggttttcctcatcctgcagttcctcgatgaggagaagttcaaggagacggtgcacaagttggagcaggagtcggccttctacttcaacatgaagcactttgaagacctggtgcagggaggggagtgggacgaggtggagaagtacctcagcgggttcaccaaggtggaggacaaccgctactccatgaaaatattcttcgagatccggaagcagaagtacctcgaagcccttgacaggcatgatcgagccaaggcggtggagatactcgtgaaggatctcaaggtgtttgcctcattcaatgaggagctgttcaaggagataacacagctgctgacgttggagaattttaggcaaaatgagcagctgtccaagtatggggacacaaagtcagctcggaatatcatgctcatggagctcaagaagcttattgaggcaaacccactgtttcgggacaagctgaatttcccaccatttaaagtttcaagactccgcacattaatcaatcaaagtcttaactggcaacatcagctatgcaagaatcccagaccaaaccctgacatcaagacactgtttaccgatcattcttgtgccgctcctaccaatggagcaagagctcctccccctgctaatgggcctcttgttggaccaatccctaagtcagctgcatttcctccaatgggtgctcatgcgccatttcaacctgtggtgtcaccatctccaaatgcaattgcgggttggatgacaaatgcgaacccctctttgccacatgctgcagtcgcacaaggaccacctggtcttgttcaacctccaaacacagcggcatttctaaaacatccaaggactccaacaagtgctcctgccattgattatcaatctgcggattctgaacatctgatgaaaagaatgcgtgtaggccaaccagatgaggtgtccttctctggtgcaagccaccctgccaacatttatactcaagatgaccttccaaaacaagttgttcgcaaccttaaccagggttcaaatgttatgagcctggatttccatcctgttcaacaaaccatccttctagttggaacaaatgttggtgacattgggatatgggaagttggctcacgagaaaggatagctcacaagacattcaaagtttgggatattagttcttgcaccttgcctttgcaggctgcactgatgaaagatgctgcaatatctgtcaatagatgcctgtggagtcctgatggaagtattttaggtgttgctttttcaaagcatattgttcagacgtatgcattcgtgctcaatggagaattgcggcagcaagcagagattgatgcccacattggtggggttaatgatattgccttctctcaccccaacaagaccctctcaattattacttgtggtgatgataaactaattaaggtatgggatgctcagacaggacaaaagcagtacacatttgaaggtcacgaagctccagtatattctgtttgccctcactacaaggagtcaattcagtttatattctctactgccatcgatgggaaaattaaggcatggttatatgactgtttgggctcaagggttgactatgatgctcctggacattggtgtactaccatggcttacagtgctgatggaacaaggctcttctcatgtggtactagcaaagatggtgattcacacttggttgagtggaatgagactgagggagctattaagaggacatacaatggtttcaggaagcgctcactgggtgttgtccagtttgatacaacaagaaaccgcttcttggctgctggagatgaattcgttgttaaattctgggatatggataacaccaacatacttacaacaacagattgtgacggtggactgcctgcgagcccacgcttgagattcaacagagaaggttcattgcttgctgttacagcaaatgaaaatggaataaaaatattagccaacactgatggacagcgtttgctaaggatgctagagagcagagcatatgagggctctcgagggccacctcaacaaattaataccaagcccccaattgtcaacacccttggttctgtttccaatgtgtctagtcctatggcagtgaattcggagagacctgatcgggcattgcccacagtgtcaatgagtggcctggcgcccatggatgttagcagaaccccagatgttaagccaagaattacagatgaatctgaaaaggttaaaacctggaagttggcagacattggtgactcaggacatctccgagcactgcgtatgccggatacatcagcaacttcaagcaaagttgtgcgtctgctgtatacaaataatggggttgcgcttttggctcttggctctaatgctgttcataagctgtggaaatggcaacgcactgataggaatcctaatggcaagtccactgcatctttcactcctcaaatgtggcaaccagcaaatgggattcttatggcaaatgacactagtgatggcaaccccgaagaagcaactgcctgcattgctctgtccaaaaatgattcctatgtgatgtctgcatccggtggcaaagtctcattgttcaacatgatgacattcaaggtcatgactactttcatggcacctccacctgctgcaactttccttgcattccaccctcaagacaataatatcattgctattggaatggaggactctaccattcaaatttataatgtccgtgttgacgaggttaaaagcaagcttaagggacattcaaaaaagatcactgggctggcattttcgcagtcaatgaatatgcttgtatcttcaggtgctgatgctcagctatgtgcttggagcattgatggttgggaaaagaagaaatcaagatatatccaatctccagcaaatcgttctggtgctttagttggtgatacaagggtgcagtttcacaatgaccaaacacatattttggtggttcatgagagccagttggcgatctatgatgcaaagctagagtgcttgcgctcgtggtccccaagagaagcactccctgctccaatttcaagtgcaatatactcatgtgatggtctcctcatctacgccggattttgtgatggtgcaattggagtcttcgaagcagagtctcttaggctgcgatgcaggatagcaccttctgcatacataccaccttccatgtctagtggtggaagtgtttaccccatggttgtcgctgcgcatcccttggagcctaaccagattgcggtcggcatgagcgatggtgctgttcatgtggtggagccgttggactcagacccaaagtggggagtggcgcctcctcaagacaatggaacccaccccacaatatcagcggctccggcagcagctaacaaaccagaagtctga</cdnaseq> |
| Protein Sequence |
<aaseq>MSSLSRELVFLILQFLDEEKFKETVHKLEQESAFYFNMKHFEDL VQGGEWDEVEKYLSGFTKVEDNRYSMKIFFEIRKQKYLEALDRHDRAKAVEILVKDLK VFASFNEELFKEITQLLTLENFRQNEQLSKYGDTKSARNIMLMELKKLIEANPLFRDK LNFPPFKVSRLRTLINQSLNWQHQLCKNPRPNPDIKTLFTDHSCAAPTNGARAPPPAN GPLVGPIPKSAAFPPMGAHAPFQPVVSPSPNAIAGWMTNANPSLPHAAVAQGPPGLVQ PPNTAAFLKHPRTPTSAPAIDYQSADSEHLMKRMRVGQPDEVSFSGASHPANIYTQDD LPKQVVRNLNQGSNVMSLDFHPVQQTILLVGTNVGDIGIWEVGSRERIAHKTFKVWDI SSCTLPLQAALMKDAAISVNRCLWSPDGSILGVAFSKHIVQTYAFVLNGELRQQAEID AHIGGVNDIAFSHPNKTLSIITCGDDKLIKVWDAQTGQKQYTFEGHEAPVYSVCPHYK ESIQFIFSTAIDGKIKAWLYDCLGSRVDYDAPGHWCTTMAYSADGTRLFSCGTSKDGD SHLVEWNETEGAIKRTYNGFRKRSLGVVQFDTTRNRFLAAGDEFVVKFWDMDNTNILT TTDCDGGLPASPRLRFNREGSLLAVTANENGIKILANTDGQRLLRMLESRAYEGSRGP PQQINTKPPIVNTLGSVSNVSSPMAVNSERPDRALPTVSMSGLAPMDVSRTPDVKPRI TDESEKVKTWKLADIGDSGHLRALRMPDTSATSSKVVRLLYTNNGVALLALGSNAVHK LWKWQRTDRNPNGKSTASFTPQMWQPANGILMANDTSDGNPEEATACIALSKNDSYVM SASGGKVSLFNMMTFKVMTTFMAPPPAATFLAFHPQDNNIIAIGMEDSTIQIYNVRVD EVKSKLKGHSKKITGLAFSQSMNMLVSSGADAQLCAWSIDGWEKKKSRYIQSPANRSG ALVGDTRVQFHNDQTHILVVHESQLAIYDAKLECLRSWSPREALPAPISSAIYSCDGL LIYAGFCDGAIGVFEAESLRLRCRIAPSAYIPPSMSSGGSVYPMVVAAHPLEPNQIAV GMSDGAVHVVEPLDSDPKWGVAPPQDNGTHPTISAAPAAANKPEV</aaseq> |
| Gene Sequence |
<dnaseqindica>557..636#747..926#1010..1123#1228..1386#2091..2271#2355..2481#2575..2684#2782..2920#3020..3129#3255..3324#3500..3573#3711..3806#3935..4030#4294..4421#4675..4909#4996..5163#5527..5634#5721..5870#6158..6268#6371..6550#6680..6808#7072..7167#7361..7546#7684..7856#7973..8174#aatcgggtccaaaaaaaccaaaagcaaagaggaaaataaaagcgagaggagtttcggagagagaaagtgagaggaggaggaggagagagaagagaagagagataagaggaggagaaggcgaacgcggcggctaggtggagaggagaggaaggaagggagcaaacgaaggcggcggcggaaccctagccggaggcgggaggaggggggagacgcgaggtgtctctctggctggtcggattcggccggccgggaggcgtcagatcggtggtcgggccgccggagacggaggagatccggggcatgggcgtggcgacgggggcgggagggtcgtcgtgagctttctgccgccgtcggtttcggcttgagctctgggtttattaattttttttggggttgctgctgttttttttgtggaggtttgagttggtgaggggggtggtttggtgcgcccgtttgaggtggtttttgaggggatttgggagggggatctgccgcggaagcggggtttttagttcggctttgagagctggaggcgcaggctgggatcggcggagccatgtcgtcgcttagcagggagctggttttcctcatcctgcagttcctcgatgaggagaagttcaaggagacggtgcacaagtaagcgtgtttttcggttgattggagtgagggattttgagccattttgttggtgaatatggtttttgattgtttcccattcgtttttggggttatttcggtcggtttaggttggagcaggagtcggccttctacttcaacatgaagcactttgaagacctggtgcagggaggggagtgggacgaggtggagaagtacctcagcgggttcaccaaggtggaggacaaccgctactccatgaaaatattcttcgagatccggaagcagaagtacctcgaagcccttgacaggtaattcattggaagcttgtaatggtggttggctgatggcaacgtgaaattgtgctgagttggattttgttttttggttgcaggcatgatcgagccaaggcggtggagatactcgtgaaggatctcaaggtgtttgcctcattcaatgaggagctgttcaaggagataacacagctgctgacgttggagaattttaggtatgttggtgatgattagtttatagcattttgattgagtaaaatgcccagtgcattggagtaagataaatgtgatagtgtattaatgatgaacacttgaacaggcaaaatgagcagctgtccaagtatggggacacaaagtcagctcggaatatcatgctcatggagctcaagaagcttattgaggcaaacccactgtttcgggacaagctgaatttcccaccatttaaagtttcaagactccgcacattaatcaatcaaaggtgtttggttgatttaagttttggcatgtttttaaattctgtcttttttgttttctcagggatgtgatctgcatgaacaacaatgttaatattcaaataggaaatgctccgtgagccgcattaaattcgcataatgccagcttaaggtttcagtggcacatatattcgtgtatatatgcttttgtgtttggaaaagaatttgtcaccgaaatgatataggtggtttagttttctgtctggtcacaataccatctttgcttggcaacgatgaatacgtaaggaagaggcgtgtgttgtttatatatggaaactacacggctttttaagcatctaacagcttttaggtgacatttatagttcttgattgtccagtaatgaatgggcatgctccaaccaatatgttcggaaattatgagtgatgtttgcctacatacatttatctctcccaattagcatgctctaatggaatacgccaaatatgctgaggttaaatagtatagtaataaattatgttttttcagtgttcttttctaactattgatgctcatgtggatctcctatttgatatttttcatcatcaactactttgtgttttgctgttccgtaatgtagacctgttaggttttctctatgaattatcttccttcagtttcttgtaaaagcatgatgctaattggggtgcgtttctttcttatgtcttgtagtcttaactggcaacatcagctatgcaagaatcccagaccaaaccctgacatcaagacactgtttaccgatcattcttgtgccgctcctaccaatggagcaagagctcctccccctgctaatgggcctcttgttggaccaatccctaagtcagctgcatttcctccaatgggtgctcatgcggtaaggattagattactaccagtaaatagtgcattttattttacactcatctgttactcaagtttcaatcttgattcttgcagccatttcaacctgtggtgtcaccatctccaaatgcaattgcgggttggatgacaaatgcgaacccctctttgccacatgctgcagtcgcacaaggaccacctggtcttgttcaacctccaaacacaggtgagataaacctaaagtaattcagctaactggttgctgtcactggtagcattgagtttgactgtttgcttggattatatatctcctttgcagcggcatttctaaaacatccaaggactccaacaagtgctcctgccattgattatcaatctgcggattctgaacatctgatgaaaagaatgcgtgtaggccaaccagatgaggtatctaatgattttgcatttattgtgtttatcctcttcactattgtctgcagatttgcatgctaaataaattacgatgcattgaaaactatgctaggtgtccttctctggtgcaagccaccctgccaacatttatactcaagatgaccttccaaaacaagttgttcgcaaccttaaccagggttcaaatgttatgagcctggatttccatcctgttcaacaaaccatccttctaggtacatactggaaacacatctgttcgttttcttttaaaactctttgtccatgttctgtccactatatttactgtgttcttgacttctcgtgtaacacagttggaacaaatgttggtgacattgggatatgggaagttggctcacgagaaaggatagctcacaagacattcaaagtttgggatattagttcttgcaccttgcctttgcaggtgacttgcatgatattcttgatctatttttgtgcactaattaccttcttttgttcttctactagcagtatgccgttttcttcttgtgatgtattctaatgctcaatctgtcttaccatgtccaggctgcactgatgaaagatgctgcaatatctgtcaatagatgcctgtggagtcctgatggaagtattttaggtcagaagatctgttcattgtggtatcattcacattttggcatgccatcttagataaatgcaacatttgtgcattgctctgacttgtagtgttttgttttaatgtttcctcgggtggagagattgaattacccccgtctgcaatattgtttcaataagtttgatttgattctcaggtgttgctttttcaaagcatattgttcagacgtatgcattcgtgctcaatggagaattgcggcagcaagcagaggtatatccatacatggatgcttcttaagaataaatatgaatgccttttgcatgtttggattagtgggatgggattttgttcaatgctgctcatcgaaacacttcctgaaaggtttctaactcttgcaaatggcacagattgatgcccacattggtggggttaatgatattgccttctctcaccccaacaagaccctctcaattattacttgtggtgatgataaactaattaaggtgaggtcgttgatatgatacactgcttcaccctttcttgagaaaaagaaatgaacaccatattcatatgatacattgctttatcctcttgaaaaaatgaaccatggatgcacatttgattttggcaggtatgggatgctcagacaggacaaaagcagtacacatttgaaggtcacgaagctccagtatattctgtttgccctcactacaaggagtcaattcaggtatttcaggaatacttcaatttactttcttaggatatgcttctgccgttttaatttgcaatgcgttgtggatctaatctttctggttagtgcatttcattgccattttcatgataaatatgcttattgcattcttggttagcattagtattgcatgttgatttgctttgattttgacatatgcaaaggtagactatgtattatcttttctactattatctgttatatccaatgcatttctttaacattcgttttctttgcagtttatattctctactgccatcgatgggaaaattaaggcatggttatatgactgtttgggctcaagggttgactatgatgctcctggacattggtgtactaccatggcttacagtgctgatggaacaaggtgatgagacactgcaaatgaatatcagctgctaattgttcaagacaataatatagtttctaaaccttcacaaattaagtgaatatattgaataaatagtatagttgtcaggcaggaacaaattaaaatgagaatatgttgcagggtgaaggatatacattttatcgtagcttctctagttgcaatttgttttgtcactccatttcacactttgtatctgtgcgagttgtttgattgtaaattttccctgcaggctcttctcatgtggtactagcaaagatggtgattcacacttggttgagtggaatgagactgagggagctattaagaggacatacaatggtttcaggaagcgctcactgggtgttgtccagtttgatacaacaagaaaccgcttcttggctgctggagatgaattcgttgttaaattctgggatatggataacaccaacatacttacaacaacagattgtgacggtggactgcctgttagtatagtttctcctagtatcatgttgtcggaatcatctacacttaaggttttgtgcttaacctcatgctaataattttgcaggcgagcccacgcttgagattcaacagagaaggttcattgcttgctgttacagcaaatgaaaatggaataaaaatattagccaacactgatggacagcgtttgctaaggatgctagagagcagagcatatgagggctctcgagggccacctcaacaaattaataccaaggtattgatgcatatacttaccatttttttaatgttcccttaaatcctagtgtcattagggtataaagataacattgattcgcgtattcggaaaaaaagataacattgtttctgttctctattataaccttgttttctgatatatctttttttttggttccgtcatctgaaaactggtttgggcctatggctgtttcctgttttctgaagcttcaaaaccactagtatctattcgtttgtaagatgcagcacggtgttctgggcaactgtttagactttagttagtttcaatcaagctgccttgtgttattttcagtgctggctgataatgttgactataacctcatttttgttcttattgtagcccccaattgtcaacacccttggttctgtttccaatgtgtctagtcctatggcagtgaattcggagagacctgatcgggcattgcccacagtgtcaatgagtggcctggtgagtttgcagaatctattttgttgtctgctcactgttcaatacttcaacctgttctgttgctaaatgcatcaaacaaataccaggcgcccatggatgttagcagaaccccagatgttaagccaagaattacagatgaatctgaaaaggttaaaacctggaagttggcagacattggtgactcaggacatctccgagcactgcgtatgccggatacatcagcaacttcaagcaaagtatgttgaacaatgtgtgcttggttgctatcaagtctgttgagttataaatattgatcatgcaataataacctgattaccttaaacatatgagcttgtctttctgtttaatgtctggaagaccgcagtatctgttggtgtttacatgcaattgttgcacaaatgtcaagttttgacctttttttgtcaacatttgataggatcttttttcagtgatagaacaggctgttcagttctgagcaatatgaaatttctgataagcactgtaatttttttttgttgcacaggttgtgcgtctgctgtatacaaataatggggttgcgcttttggctcttggctctaatgctgttcataagctgtggaaatggcaacgcactgataggaatcctaatggcaaggttagagtggagagttgttcttatttggatttcatctgttcttatttggatttcatctgctattctgtttgcttggtttctaaatatatgcatatattgtagtccactgcatctttcactcctcaaatgtggcaaccagcaaatgggattcttatggcaaatgacactagtgatggcaaccccgaagaagcaactgcctgcattgctctgtccaaaaatgattcctatgtgatgtctgcatccggtggcaaagtctcattgttcaacatgatgacattcaaggtatatgatctcttcggtgtgtagcacaatcaattgttattaccctagagcataggtcatgagttactttccataaaaatatgtgttattctatagttgtgacgttaaaatttttgaattttttcacaggtcatgactactttcatggcacctccacctgctgcaactttccttgcattccaccctcaagacaataatatcattgctattggaatggaggactctaccattcaaatttataatgtccgtgttgacgaggtgagtgatattctcttaatggttctcaccgcaagtgattaaactagtcaaataatgtttctcatttcctcttaccagatgaatcagatcttgtgagattttgtagatgacgttttagatatatgtatttttttttttacttataaaccttatgtgcaatagaaatgctcagtgaccttcaactaactgaagattaaaatttaaacagctgagaacttgtttcagtgataattgattccttctgtcttaaccatatggcataggttaaaagcaagcttaagggacattcaaaaaagatcactgggctggcattttcgcagtcaatgaatatgcttgtatcttcaggtgctgatgctcaggtatgaattttcctatatattgtgcagaattaaatgtcactttgtgtgcatacttcatcctccatgctcttgttagtcccatgtctagccatcctttagcctgttttgttaaaaaaaaaagattctgatcgcggtggcaagtggactatatatttgtttctgaatcaatggtcattggaatggaattttgcagctatgtgcttggagcattgatggttgggaaaagaagaaatcaagatatatccaatctccagcaaatcgttctggtgctttagttggtgatacaagggtgcagtttcacaatgaccaaacacatattttggtggttcatgagagccagttggcgatctatgatgcaaagctagagtgcttgcgctcggttagttctcagattaccgtaatttaatatatgcatgtattatattacatcgtgctagtgtgataaacatttgtgatccattcaatcaatcattgtattatgatagttgaatttgacctcattgcttgatcatgcagtggtccccaagagaagcactccctgctccaatttcaagtgcaatatactcatgtgatggtctcctcatctacgccggattttgtgatggtgcaattggagtcttcgaagcagagtctcttaggctgcgatgcaggatagcaccttctgcatacataccaccttccatgtctaggtatgtatagtcccctacatgcctacactgctttgtgtttctgttgggtatggtaatcttagtcctggcgaccatcatgttattgttgatgcccatttttgcatcttttccaacagtggtggaagtgtttaccccatggttgtcgctgcgcatcccttggagcctaaccagattgcggtcggcatgagcgatggtgctgttcatgtggtggagccgttggactcagacccaaagtggggagtggcgcctcctcaagacaatggaacccaccccacaatatcagcggctccggcagcagctaacaaaccagaagtctgaccatccctctagtgacttggccagcagtgccgacattcgttagacccaaagaatggtaggatcgtaggagatagggagaaagaagaaacagtttagatttgtgggatgaggtgaaatgtatcaagtccacagcatctccttttgcctgtggcagcagcacaggtgttgattgatgatgatgatgacatgtctaaattagtttttggttcttttttcccacccccagaaaatcttgacctcacctggcggctgccgcagtgtgtgccggagatggctgccatctttccctcctttgtaaagcttttctagctctgagctagtggtggttggtaccttagagaatgttcttttgttcctgcccttttttgcggggtaggaaggtattcctagtgtaaaatatggttggcatgttggatggtggtatttgtttggcctaatgcgactgattcaaccaattcttcggctcatgtcctatagatgtttgctaaccttgtaggccttgaaatc</dnaseqindica> 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