Difference between revisions of "Os08g0176800"
(Created page with "{{JaponicaGene|
GeneName = Os08g0176800|
Description = Similar to mRNA-associated protein mrnp 41 (Rae1 protein homolog)|
Version = NM_001067654.1 GI:115475044 GeneID:43447...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os08g0176800| | GeneName = Os08g0176800| | ||
Revision as of 20:45, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os08g0176800 |
|---|---|
| Description |
Similar to mRNA-associated protein mrnp 41 (Rae1 protein homolog) |
| Version |
NM_001067654.1 GI:115475044 GeneID:4344798 |
| Length |
5556 bp |
| Definition |
Oryza sativa Japonica Group Os08g0176800, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:4495690..4501245 |
| Sequence Coding Region |
4496202..4496249,4496339..4496419,4497099..4497170,4497643..4497720,4498663..4498791 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:4495690..4501245 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:4495690..4501245 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcgactcttggtcttgccccaaacatgaatccaaacaagtcatttgaggtactgcctaatccaggtgactccgtatcgagcctcagttttagcccaaagagcaaccttctggtggcaacttcctgggataaccaggtgcggtgctgggagattgttggtgggagtagtcaaccaaaggcatctatatcgcatgaccagccagtcctctgttcagcttggaaggatgatggaactactgtgttctctggaggctgtgataaacaagtaaaaatgtggcctctgttgtctggtgggcaggctcagactgttgcaatgcatgacgcacctgtcaaggagatcgcttggattcctcaaatgaatcttcttgtctctggaagctgggataagactctaaggtattgggacacaaggcaatcaaatcctgtccatgttcagcaacttcctgagcgctgttacgcacttacagtgaattatccccttatgattgtgggaactgctgatcgtaatctggtcgtcttcaacttgcagaatcctcagacggagttcaagcgcatccaatcgccactcaaataccagactaggtgtcttgctgcattcccggatcaacaaggatttttggtgggttccatagaaggaagagttggtgtgcatcatattgatgactcacagcaaagcaaaaatttcacgttcaaatgtcacagggaagggaatgatattttctctgtcaattcactcaattttcacccagttcatcacacgtttgcaactgctggatcagatggcgcatttaatttctgggataaggatagcaaacaaagactgaaggcttttagtcggtgccctcttcctattccttgcagtaccttcaacagtgatgggtcgatatttgcttatgcagtctgctatgactggagccgtggggctgaaaaccacaaccctgccactgcaaagacatccatctatcttcacagtccacaggaatctgaggttaaagggaagccgagaatcgcaacaagtagaaagtga</cdnaseq> |
| Protein Sequence |
<aaseq>MATLGLAPNMNPNKSFEVLPNPGDSVSSLSFSPKSNLLVATSWD NQVRCWEIVGGSSQPKASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQAQ TVAMHDAPVKEIAWIPQMNLLVSGSWDKTLRYWDTRQSNPVHVQQLPERCYALTVNYP LMIVGTADRNLVVFNLQNPQTEFKRIQSPLKYQTRCLAAFPDQQGFLVGSIEGRVGVH HIDDSQQSKNFTFKCHREGNDIFSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLK AFSRCPLPIPCSTFNSDGSIFAYAVCYDWSRGAENHNPATAKTSIYLHSPQESEVKGK PRIATSRK</aaseq> |
| Gene Sequence |
<dnaseqindica>4997..5044#4827..4907#4076..4147#3526..3603#2455..2583#1957..2037#1694..1835#1034..1227#872..937#705..791#523..573#ggttgaagtgaaccaaaatccgtaggtcgtatcgtagggagggcctgcgccgatccccatccgtcccgcgactcgaactcgagcgagcagaggcggcgccggcgctcgtcctgccgccaccgccgcggccgcctgagccgatcccatccatcccgcgagcgagcgagcgcttccgccgcatcctggtcctggttagcacatcctccttcccatctctctctacccacgctctcactatatcgaatttgcgttaaccctagcttcttctgttctagaaattccttaatactagtagcagtttgttaatttgttcccaaaaagtttgggggttcaactgaacccccatgtcccatgttagatccgcccatgcgtggtgcttttgcgggagatcggattgctattgtctctctatgctttgtgctgtttctaagttggaatgtgctaacagcttgagttggtttctcttgttttgtttcttacgatattttgttaaatttgaattgaaggatcaggtagaaggagatggcgactcttggtcttgccccaaacatgaatccaaacaagtcatttgaggtgtgatgctttatgcaacaattgtcctccttttctatctgtgcttgtgttggtcctcacattctgtaaataataaatcatactagtatttactttgtaagttatttattatgtttaaattgtaaatgcaggtactgcctaatccaggtgactccgtatcgagcctcagttttagcccaaagagcaaccttctggtggcaacttcctgggataaccaggtaagtttatttttcctgtaaactttcagtatgcatttatcaatgtgttcttaccaggtttgactttgagttttgtgcaggtgcggtgctgggagattgttggtgggagtagtcaaccaaaggcatctatatcgcatgaccagccagtatgatctcaatatttctctcaagaccacattcacataatgtacagtattgattttcctagtatttagtgtgctcattgatttgttttctatcaggtcctctgttcagcttggaaggatgatggaactactgtgttctctggaggctgtgataaacaagtaaaaatgtggcctctgttgtctggtgggcaggctcagactgttgcaatgcatgacgcacctgtcaaggagatcgcttggattcctcaaatgaatcttcttgtctctggaagctgggataagactctaaggtgtgaaaaatccaatccttgcagcctcggtattcctttttacatggaattcgaattcatatcaaccactctatttactcagatagttattcgctagtaagtagtaactatggattcaaaatatacaccttgtgatcgttcctaaaaatatttgttaattttagcttatattgttggggagaccctaattgctattgatatttgatttaggaagcttgaggtcaagcatctaagttcaagctgtctatttgattaataggcaattaggcatgcattttatattggcccatatttggtttgccaccatagacagccaaactttggtaatgtgacataagttgtatgagcattaccaaaaaatttagggaactttttcttaatctcatcgcagcacataggcctctgttcttgtggttacagtgatctgttctagtcaatccaatactgaccactttgctatttataggtattgggacacaaggcaatcaaatcctgtccatgttcagcaacttcctgagcgctgttacgcacttacagtgaattatccccttatgattgtgggaactgctgatcgtaatctggtcgtcttcaacttgcagaatcctcaggttggtctttgtgaacatcgcacatgtccattaaaaatgaataatggggatcactcgtttttcatctgcaacttctcatattgaactgagtgtttttattgtttcctgttttggtcattagacggagttcaagcgcatccaatcgccactcaaataccagactaggtgtcttgctgcattcccggatcaacaaggatttttggtaatgcaacttttttttgtaaaaatttctagtctattctaaatgcttaaatagataactattctagcaatgcattgttatgtacttatggtctttttcttggttggtattcacccaatggtattgtcttcagctagtatatatttgacaccaaaaaaattggtacaaggttcaatacgaaaaattgtgtttagcaatttctatagttgtgcatcttcccatttataatctgcctagagatgtctagcaaggtaggttttgtatatgcttgaaccaaccaatgtttacctttacccataatcagcaatgaccttgttcggatagagtgctcagcgttacctaagaataatttctatctgacattatacaagaggtatatttccatgtgtctgactctgaccctaattttgtttcaaggtgggttccatagaaggaagagttggtgtgcatcatattgatgactcacagcaaagcaaaaatttcacgttcaaatgtcacagggaagggaatgatattttctctgtcaattcactcaattttcacccagtaagatctccgtctgtctcttgttttcctataccttagcatatttatgatattttttctgaatggtcttaccttgctgtggagtacacatgaatgccatatagcacttttgcttttattggaaatgcttatgcgggagagttatgctgagttatggtgcattttttttcttaaccatcacttgatttgtagaacagtaaaaacacagtttcttcttccacaaaatacctctaattctctttccattgaacagtatacatgttttgcacaattctaactttatatattttgaccaatgaattctggcaatatatactatatacgagtggcaccattggtttcataccccaaagttctctcatatgatcttgattagtgtgcctgttggtgtctgtctttgctcagcactagcaccatgcctaggcaactgaactactagacagcctgtagcccaacttggaggtgttaggtgtcaacctgccacagggcctagcacctacggcaacacattttttttgcagttattcacaaagtactggttgaagttctacgttggaatgtaggatacttccaagtaaggaacgtcaaatgttaagacttaatctaacaaccgtatataatctgatcatgcagatgttgcaattctcataaagatatgtctcaaaatactccaaaaatgtcctatttacgattccatcgaacaattccatattatgactattgaatgttatgcatacatcatagaacaccttttcttcttttggttatgatattttcagttataggatctttttcattaaattggtatgcttcattgatgaatacatctctaggatatgtttcattgagaaaagcattgccgacttactggtttttgaagtctggaaatcatagtttgcggagttatatttaaggtttcatattttctatcacgtggcacaggttcatcacacgtttgcaactgctggatcagatggcgcatttaatttctgggataaggatagcaaacaaagactgaaggtttgatgttggctcttttgaagttccatttgtactggttattgcacttgtatttttgttcccttgagtattcagtgatttttaatagtcataattgctttatctgttattttagtgtgctgcataaatattcttgcacacatctggaaaccaaaccaagataaagctcatgaacttacttttgtaaattcagaacagtgttcaagaaaaaatcatctgtttgtatctgctcaaccatgtaattagtgttatgcaattattttttagtgaaaatgctcatatttttactcgatggcatggattctcttattgcatgagcaatctgcctaatttgcaatcatatgggtgcttagtacaaggcaggtcatttgtgtttgctaattttgttttgttgcagtcaatttctcacatgcatccctttattttatacagaatataatcattcacttcccatgtcactttttttacacaggcttttagtcggtgccctcttcctattccttgcagtaccttcaacagtgatgggtcgatatttgcttatgcagtaagtcaagtgatgcttgagtatcttgttgtactttattagtttgtgactatatgcaaccatgttttctgaccaggttgaatttagatgtattttattgtttcccatgccacagttctgcaatgaactagacatcttgaatgcacatattgaggccctgtttgattcaacttaggattattataatctggattattaggagtaagctgaaacaaacagatagcttattatgatagatcattacaatctataagccatattactataatctggtaatctactctaaaggtgcttttttagatttttgggtggctaacagctaataatccagagaaacaaacagctaacagcttattctatgtcggctcattataatccaacttatagttatctggctcaataatctagattacaataatcttaagctgaaacaatagggcctaaacatggtgaaagaagtgcctgatgttttccattcattagatagactttgagttcaaatggatgcccggtcctgtttaacctgtatgtcaaatgcattcccttggattttgaattcaaatgaaatgcttgttcttgttgagctgtaaaaatgctaagtgatagttctaactgaggctccaagttttgaagaaaaagactacagtttggttagttaaccatgtttactgttaaccaggtctgctatgactggagccgtggggctgaaaaccacaaccctgccactgcaaagacatccatctatcttcacagtccacaggtaatagttgtttacagttatcatcctgagattctttcctgagtttgtctcacaatgcatttacactgacgttccctcattttgaataggaatctgaggttaaagggaagccgagaatcgcaacaagtagaaagtgattacatccagctacgcaaaaccaaagagtgcacaagaaatcatgtacattggaagacaaaaacgtttctccaggacctctgtccatcgtgtaggatgcttttctcttggttggtcatcaattttgttgtgtccagtctggtgttagcatctggtagatgtaaatgtcagtctactcgtagtcactgaagatagggggtttagtcgcaggttttagcatgcatcagtttgcagtgtctagttctatttaagttatgtttaccaagtttatgcgagtcttatgttgtcgatataatcagatcagcccgaaccgtttctaagggaggtgttgcaagtgatgtaaattattgcaaatgtagattcatatttcgttagaattatcgccacgttctgagatgtactaaatttacccgtgagaaaccagtggatgctgactttctggttttggcccgtgaatctgaatggcctacttgaatttgaaatggtagctgtctgaaaaatacgattaacatgt</dnaseqindica> 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