Difference between revisions of "Os08g0179400"
(Created page with "{{JaponicaGene|
GeneName = Os08g0179400|
Description = Helix-loop-helix DNA-binding domain containing protein|
Version = NM_001188484.1 GI:297726098 GeneID:9271688|
Length...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os08g0179400| | GeneName = Os08g0179400| | ||
Revision as of 20:45, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os08g0179400 |
|---|---|
| Description |
Helix-loop-helix DNA-binding domain containing protein |
| Version |
NM_001188484.1 GI:297726098 GeneID:9271688 |
| Length |
3411 bp |
| Definition |
Oryza sativa Japonica Group Os08g0179400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:4644301..4647711 |
| Sequence Coding Region |
4644301..4644474,4645241..4645291,4645634..4645699,4645839..4645904,4646048..4646239 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:4644301..4647711 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:4644301..4647711 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgtacggcggcggcgcggcagcgggtggtgctacgacgacgacggggagccacggcggcggcggcggcgactggtggagcgccgcggtgtcgtcgtgctcggcgccggcgccggagacgatgcaagggttcggcggctggtcggccgcggtggtggccgtcgacggcggtggcaacacgtcgaggtcagctgctggtaacactgcttcgtcggagtcgcctggatcgctcgccaccggaagctccatcactttccaggagcccgccggcggcgtcgccgacccggccgccatcgccgtgcacgcgcagacggtggccggcggcggcggcggcggctggaatcagcagcctttcttggatgggagtggtttccatggctacatgagctcatcaagaaatgatcaccataccaatcatcatcatcatcagatcaacacgccgagtttgatgagcaactcatcatcaaataacggcgtgatgctgcaagagcaccaacatgaccagaattaccagttcctctccaacctcggcttcgagctgctctcgtcgccgacctcgccgtacggcggcggtggcggcttccgctcctcgctgctcagaagcctcacggagccggcggcggcagcgaagcctaatgactcgccggggtttcagcagtatcatcatcatcagccggcgatgaacctgcagccgccggccgccgccgccgggagagagccactgcagttcaccaacagcacggcggcgccgttttggaacccttcctccaggttcaccgtcgcggcggagggtacagcactaggtggtgccggagcatcgccggcgcagcctacgccggcgagccttgcagctaagagggcattagaaggagtaggagactccagctcaatcatcacgaagaaggcgaaggctgattccacgccactaaagaaatccagaaccgggacgccatcgccattgccgacgaccttcaaggcatgtgtctacatatatataatatttaatttgtcccaaatggtgattgatttccttccaataaagttccatgtgaggaaagagaagctaggggacagggtcacagcactccaacaactagtctccccttttggaaagacggacacggcatcggtgctccacgagacaatcgagtacatcaagttcctgcacgatcaagttggtgcacttagtgctccttacctaaagaacaggcaacaagtgccccacttgaagaactccaccggcgtcgacaacgatggcggcggcggcggcggcgaggcgacggcggctagcaagagagacctcaccggaagagggctgtgcctggtcccgatatcgagcaccttcgccgtcgccagcgagacgccggtcgatttctggacgccgttcggtgcagccttccggtag</cdnaseq> |
| Protein Sequence |
<aaseq>MYGGGAAAGGATTTTGSHGGGGGDWWSAAVSSCSAPAPETMQGF GGWSAAVVAVDGGGNTSRSAAGNTASSESPGSLATGSSITFQEPAGGVADPAAIAVHA QTVAGGGGGGWNQQPFLDGSGFHGYMSSSRNDHHTNHHHHQINTPSLMSNSSSNNGVM LQEHQHDQNYQFLSNLGFELLSSPTSPYGGGGGFRSSLLRSLTEPAAAAKPNDSPGFQ QYHHHQPAMNLQPPAAAAGREPLQFTNSTAAPFWNPSSRFTVAAEGTALGGAGASPAQ PTPASLAAKRALEGVGDSSSIITKKAKADSTPLKKSRTGTPSPLPTTFKACVYIYIIF NLSQMVIDFLPIKFHVRKEKLGDRVTALQQLVSPFGKTDTASVLHETIEYIKFLHDQV GALSAPYLKNRQQVPHLKNSTGVDNDGGGGGGEATAASKRDLTGRGLCLVPISSTFAV ASETPVDFWTPFGAAFR</aaseq> |
| Gene Sequence |
<dnaseqindica>3238..3411#2421..2471#2013..2078#1808..1873#1473..1664#585..1083#1..356#atgtacggcggcggcgcggcagcgggtggtgctacgacgacgacggggagccacggcggcggcggcggcgactggtggagcgccgcggtgtcgtcgtgctcggcgccggcgccggagacgatgcaagggttcggcggctggtcggccgcggtggtggccgtcgacggcggtggcaacacgtcgaggtcagctgctggtaacactgcttcgtcggagtcgcctggatcgctcgccaccggaagctccatcactttccaggagcccgccggcggcgtcgccgacccggccgccatcgccgtgcacgcgcagacggtggccggcggcggcggcggcggctggaatcagcagcctttcttgtgagctctagctatatgactcatgatcatatgtgtatgcatgatgaattgataatacacatataatcaaccaaagcatatatatagatttcatatatactctacatgcttaattagttgctcatgatcttagtgagattgatttatttattcatgcatgttaagttggtgaataattatcagtggaatgatttaattatatgcatatatgtgtgatttctgatcaagggatgggagtggtttccatggctacatgagctcatcaagaaatgatcaccataccaatcatcatcatcatcagatcaacacgccgagtttgatgagcaactcatcatcaaataacggcgtgatgctgcaagagcaccaacatgaccagaattaccagttcctctccaacctcggcttcgagctgctctcgtcgccgacctcgccgtacggcggcggtggcggcttccgctcctcgctgctcagaagcctcacggagccggcggcggcagcgaagcctaatgactcgccggggtttcagcagtatcatcatcatcagccggcgatgaacctgcagccgccggccgccgccgccgggagagagccactgcagttcaccaacagcacggcggcgccgttttggaacccttcctccaggttcaccgtcgcggcggagggtacagcactaggtggtgccggagcatcgccggcgcagcctacgccggcgagccttgcagctaaggttaattggcacacacttgtacgtatatggacatagttgatagttaattgtgcgcctatactaactaaaagtaattaacacaatatcacaattagccacacctcttatatagtatgagttgttattggacataagtgaattgtgcatatttactcatcagcttaatattttgggttaaactaattagtagtataatcttatgcttagctgcgggatatgtgaatatgaatatatgttatatattatagaaattatagatgtatatatttaaataatgtaaaaataatgtggagataatgatttgacattgtttaaatattaagtttggtgcatgcatgcaactgatcaatagttcacatttgtttatttttttgtgttaatatgtgtagagggcattagaaggagtaggagactccagctcaatcatcacgaagaaggcgaaggctgattccacgccactaaagaaatccagaaccgggacgccatcgccattgccgacgaccttcaaggcatgtgtctacatatatataatatttaatttgtcccaaatggtgattgatttccttccaataaagttccatgtatgtatgagtgagctgttacaaatcatgagagaagtaaaccgttagagatcataaagttccaccttaattagttcagtcaaactgttaattagatgtattaatgtacatattgaatttcacataaattatatatgtttcaggtgaggaaagagaagctaggggacagggtcacagcactccaacaactagtctccccttttggaaaggtgagtgcaccatatatatagttcttgaaattaagaatcttattaagatcgatcaaacatgcaactctgatcgatccctttacaacaacaacaacaacaaaaaaaaatgatggatcaacctcggcgtgcgtgcgtgcagacggacacggcatcggtgctccacgagacaatcgagtacatcaagttcctgcacgatcaagttggtgtaagtgcgccatctagcggcaatattttgttctacccttccccttttaatcatatacatgtagaaattaacaacattggtccatgttctgatccaagtatccagtgcaacacctagctagctactgccttaattattgcactaattaatatttctttaaaacatttcttcttgcataaatgctctctgcttatatatatatatgtatatataatttcctcaaacatattcttcaaacatgtagtgcacgcatacattctgctttgcactataatatattcaaacattgttcatatatatatagtgtactcatgtatgtgttatgtgtattcatatatgcaggcacttagtgctccttacctaaagaacaggcaacaagtgccccacttgaaggtactatatatatacaagctaaaccatgcagtgctagctcacatatactacacacaatataatgcttttctcttcttcttttcacacacatattgctatatatcgtcattgtttgatcatcaagtacgtattgcatatattatcgatgcatgagggtatatacccgcataaaaacatgcaagcttgttagtgtagttcattccaacttttgctagtacaaattttggaagaaaaaaataactagatttgaataagcaggcaaagaaaccctgcttgcttgcccggtcaacttacatcgatccctagcatatatatacattattcatgttaatttaattactttacatgcttcctttaatcaatctcattttttcaattatgcttatgcttatcagttaaaacttgaattttcaaacttaaatttggagttaattaattttgccatttttctcgttatagtctattttccagtgtttgcttttaaatcgttaagaacacatatataaaatttttatttataaattatttttcatttgtaaatatgccgttttcatttcttcctccaatatgccaaactatggagctgaatatttcagaactccggtgacaatatttactgtacatgcttttaatttttttcttcagttcacgcatatatattgctatatatcgtacgtcgtcgtttgatcatcaagcttgaacgtatatagtgcacatatgctcactatatacatgctaattaattcgttgattaatattatctcagaactccaccggcgtcgacaacgatggcggcggcggcggcggcgaggcgacggcggctagcaagagagacctcaccggaagagggctgtgcctggtcccgatatcgagcaccttcgccgtcgccagcgagacgccggtcgatttctggacgccgttcggtgcagccttccggtag</dnaseqindica> |
| External Link(s) |
