Difference between revisions of "Os08g0243100"

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(Created page with "{{JaponicaGene| GeneName = Os08g0243100| Description = 4'-phosphopantetheinyl transferase domain containing protein| Version = NM_001067880.1 GI:115475496 GeneID:4345046| ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os08g0243100|
 
GeneName = Os08g0243100|

Revision as of 20:46, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0243100

Description

4'-phosphopantetheinyl transferase domain containing protein

Version

NM_001067880.1 GI:115475496 GeneID:4345046

Length

5090 bp

Definition

Oryza sativa Japonica Group Os08g0243100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:8702803..8707892

Sequence Coding Region

8702805..8702935,8703343..8703518,8705092..8705156,8705245..8705346,8705452..8705607
,8706586..8706684,8707007..8707127,8707229..8707335

Expression

GEO Profiles:Os08g0243100

Genome Context

<gbrowseImage1> name=NC_008401:8702803..8707892 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:8702803..8707892 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcaccaccgcctcctcctccgccgcggcgcgatgcccgtccccccgccgctgcccccgcggacgccgccgccgggggtcgcgcgccccttcgcctccctccctcccccaccgcctctccagtcacgcagggaggtgcatgtttggtatgtttgccctgatgagctgaatgatcactcccacctggatatgtacatggaactcctttctccctccgaaaggaagaacgcgctgtctatgaacgggccgaggctgcagaaagatgctatgttgtcgcgtgcattgctgcgcactaccctctcaagatatacaaattctaaaattgatccaagatcatttgagtttaagaagaataaatttggtaagcctgagatattgtggcggtctgatgatagcaatatggagtggccttggcattttaatatttcacacacatcttctctgattgcctgcggcattgcgatggatgctcctattggcattgatgttgaagaaaagaagagaaagacaaccaagagtattttatctcttgctcgccgttactttaccccttcagaagttgattctctagctaaaattgctgattctgatgctcagcaaaaggaattcataaaactatggaccctaaaagaggcatatgttaaggctcttggaagggggttttcaggtgctccttttaataggttttcaatccaattgaaaacaaatagccgaattcagattactaaggcaccaaaagtgtgtaatgattctgattctggtgattatctttctgagaactggcggtttgcacttacagagctaaacagttcttattatatggcggtttgtatagaggacaactcaagaggttctgaaaatggttcagtaccactaggattgaaagtatggaagaccgttccattcatagaagatacacttgtttctggaacagatgccgtaaaacttattacgtga</cdnaseq>

Protein Sequence

<aaseq>MHHRLLLRRGAMPVPPPLPPRTPPPGVARPFASLPPPPPLQSRR EVHVWYVCPDELNDHSHLDMYMELLSPSERKNALSMNGPRLQKDAMLSRALLRTTLSR YTNSKIDPRSFEFKKNKFGKPEILWRSDDSNMEWPWHFNISHTSSLIACGIAMDAPIG IDVEEKKRKTTKSILSLARRYFTPSEVDSLAKIADSDAQQKEFIKLWTLKEAYVKALG RGFSGAPFNRFSIQLKTNSRIQITKAPKVCNDSDSGDYLSENWRFALTELNSSYYMAV CIEDNSRGSENGSVPLGLKVWKTVPFIEDTLVSGTDAVKLIT</aaseq>

Gene Sequence

<dnaseqindica>3..133#541..716#2290..2354#2443..2544#2650..2805#3784..3882#4205..4325#4427..4533#gaatgcaccaccgcctcctcctccgccgcggcgcgatgcccgtccccccgccgctgcccccgcggacgccgccgccgggggtcgcgcgccccttcgcctccctccctcccccaccgcctctccagtcacgcaggtgcgccccgccctccctgcttctcctttgtgaggggaagcactgcccttctctctggtggtggtggtagatctggtgggatgcaggtcgggagtgggagaatcttggggaggcttagagcttaatctccttcatttgctgcgctccccagatgctgtcttcaggcgcaatgatgattagcttgctactagtactacctaactattttgattgtgggttattgaattgctgctattttgattttttttttgagggcatgaacagtcatcaacaactcaagaaacaagctgaagatgtagtaccacttagtgtattttttttctcttctgttgggggaaggatgtgattttggtgagagaatgacctgtgccttttcttttttacatgtgggaatggggatgttgcagggaggtgcatgtttggtatgtttgccctgatgagctgaatgatcactcccacctggatatgtacatggaactcctttctccctccgaaaggaagaacgcgctgtctatgaacgggccgaggctgcagaaagatgctatgttgtcgcgtgcattgctgcgcactaccctctcaagatgtatgtaaccatcaactgtctctcgagtctcgatgagtgcatatctttcatttttgttttcatgcatgttgttatcatttaataaagcattttggtgtttagaattcttcaattcagaaattattgactgattatgccagattttacataagacttgttcctgtagtaaccctgtgtctgattatgggacaacactttcttaatccttactaatgatggcaagaattaggcctatttggagcaaaaattgtgcttctaacacgaaaattgagctgttttatacactacagtttagatgcaatcaattgtttcatgcaaactttgcttgaaaactggactattagcctgcacctttcattgtgtattcatgtctgttatattcccaaattcatattcaggatcaatcgtgtagatttcgccctgttgtgtcaacttatatagcttcattgcttaagtaacaacctagggcctgctggctatagccaaatactcatgatccagtggcctcaacttgcaaaggccctaagtactgatgcatatggaacatgatatgatataaacacgataaagtgtcaatgttgctcaatatcattggaagatcacaaattgggatataccgtctgtcatgagcattgggctgtaaggccaaggcccataggcagcccataccagttaagttagagataagattattagttagttagtgataagattaattccttacttaggggttaagttataccatctatataaggatgtgattgtggctattatcaattaagtaatgaatatcaattagtctaatatctccctcctaataatgttcttctccctagcctaaatctacatcccttctccaggagccgaggccgcccggttatcctcctggtggtggttatcccgtcatggcctcgggtcgtgacattgccccatgtgttattgacaattttcccttgggccccaaatttgatttgcgcattgtatgtttgatttacaactgtttgcgatgggactgagctaatcccatttattataaatgaaagttatgaaatgatactagcactcccctgatcccaattaggtgttttatacaataaccaataactaggagcacctagcaaatagcgtgctgccctcattcaaatcctttatttaccttttttttagcataaagcctttatttaccagttgttgctcttggaattgtgtatattgctcttgtttagagtagtaaatgaccatgtaaataaaacttgtcactaaaaagcaaggggtatataacagctaaattgtgagaagtcatcttgaagtttgaaattgtagagtaacacatatgcaggaacaaatttgaaagctagattgacatgtattcgggaacagatgggatattgaaataggacaatgagaatcatcatttattcaacctgccatatgaaaatttctgtttgaatttatgcactatcttgtctacaaaaagcatactttcttgttattagttagcttcaaacatatcatgggatagcactacaagattactgatatgattactgcttgtttgtttggactagactagatacaaattctaaaattgatccaagatcatttgagtttaagaagaataaatttggtaagcctgaggtaagaagttgctctttacaatgttttgattttagagatcaaaacttcgaaaatttttgtcttagattatttttccttgtttaatcagatattgtggcggtctgatgatagcaatatggagtggccttggcattttaatatttcacacacatcttctctgattgcctgcggcattgcgatggatgctcctgtatgctccttttccatatgaccactaaaaaagggagaaaaggaaatctttgtacttttgttcacgtgaaaatagttttttaattgttgctcttatcaatttcagattggcattgatgttgaagaaaagaagagaaagacaaccaagagtattttatctcttgctcgccgttactttaccccttcagaagttgattctctagctaaaattgctgattctgatgctcagcaaaaggaattcataaaactatggaccctaaaagtatgcgagtctctctttgtcctcatttattattatttcttttgcagtcattgatagtgctgatcaatctctttctagaacattgagtggtaatggtatttattgtcctctactttggaaccagtccattggatctcactcaactattgctgtagtttagttttcaagtttcaacccctgagctccaaaagtgggtatcctatccaacactcctgaactatcaaaactgccactaggttggtttattagttgttttcatcactttgacatgatatcagccagcacatgactggactgcggtgcaacttcatctttcagcggccatgagctgcttgaagtgttttgtttgggaagttagatctgttatgtgtgagatgagatgctggcaccatctggatggcaaacatctaataaacaagccttggggtgaatgagttgttgacagatgagatgagggtgtcaactacctggtttaaacagactgatttgttcttctttctagttgtatgctagagatcaactgacaagatcgcttaatcttatacagccgcaaagtacactgtaacttactgtgctggttttatgcaatagacaagttggtaaatatatcatacctagggcaaacagtttagatgctaacaccgttggatgtgttttaaatgatgattgacaggggaggtagtggttttatgaacaattcctctgtggaacactaaattgttgaggatgcgttctcaccatttgaatttagttaattggaatatcgtagaacagttaacgtggagaggtagcaacaagaaatatgaatttggtgaaaatattttgaagtgcacaaatcaaaatgggttcacataaatttctggatataaaatcgatccatgtagaacatagagaggttattaacactgatttggcgatatgatgttgcagaagatatgattacatggattacttatttcttatgccttgaacttttaggaggcatatgttaaggctcttggaagggggttttcaggtgctccttttaataggttttcaatccaattgaaaacaaatagccgaattcagattactaaggtatgtaactgtactttcttctttcttgttatctcatgtacaccaatgtgaagttgagaaccaggattgtgcaaatggataaaatataacatgaattatcttagcacactgttgtatgacactcctggatctctagcatatgttatggcctaactgtcagctggaaaatttcatcctggatctctagcaaatttcatctggaaaattgtcttaggtttttattgctctgtttcttcaacttataatagatcattttataccaacgaagcaagcacttgaacatagcgattaatctgacttgatatccattgaattcctccaggcaccaaaagtgtgtaatgattctgattctggtgattatctttctgagaactggcggtttgcacttacagagctaaacagttcttattatatggcggtttgtatagaggacaactcaagaggtttgtaccttttgttttccgtaagtaggagagatttgtactgaactttttttctctcttgttcttacaatcactgcattatttattgttttatgttgcaggttctgaaaatggttcagtaccactaggattgaaagtatggaagaccgttccattcatagaagatacacttgtttctggaacagatgccgtaaaacttattacgtgactacatataagaatctaccatttatcatgtgaattcgtcatatgacaacatggatattggacctagagaggaaactctagtattcttcgatcgttattagtaatgcctgacattgcgtgctcgggaggacctaggaaatgcaacaccgttttctccagattcatacttcggttattagttcccacttcccagcctgccgcataaacatgttttccgaaggaacaaccatcatttttactgattggaaggatgtcaacactagtacaagctggcatgttgaaagctagaaatttcaccatctactcgcaagattgaagccccactttgcaaacacgattgcattccaggttaaagagttgtttgtatttgtcactattagagcttagagaataggaataggagtgctctgtgttttgtgttattacattggattggaataagatgtgctcctgccaagttaattatgttggcttggtttgaggtagcagttagaattcatgtgctgtttgaactgatgcactgataagtttaattttcttgagtgatcgattatttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0243100, RefSeq:Os08g0243100