Difference between revisions of "Os08g0245400"
(Created page with "{{JaponicaGene|
GeneName = Os08g0245400|
Description = Aminotransferase class-III family protein|
Version = NM_001067889.1 GI:115475514 GeneID:4345056|
Length = 8189 bp|
...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os08g0245400| | GeneName = Os08g0245400| | ||
Revision as of 20:46, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os08g0245400 |
|---|---|
| Description |
Aminotransferase class-III family protein |
| Version |
NM_001067889.1 GI:115475514 GeneID:4345056 |
| Length |
8189 bp |
| Definition |
Oryza sativa Japonica Group Os08g0245400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:8878957..8887145 |
| Sequence Coding Region |
8879252..8879423,8880021..8880133,8880735..8880869,8881008..8881139,8881483..8881616 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:8878957..8887145 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:8878957..8887145 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgctccgcctcctccgccacgctcgccgccactccacctcctcctcctcctccgccgccgccgccgccgtgcccctcacctcgccggccttcgccgtcttcggcgccaacacgggcgtcggcaagacgctcgtctccgcgggcctcgtcgcctcccttctcgcctccccctccccttccccttccaccgtcgcctacctcaagccgctccagaccggcttccccgatgactccgacgcgcgcttcgtcttcgaccgggcccccgcgctcctccgccgcctccgcctcgccggcggcggcgcctccacccgcctcgtcgcgtccaaccacaccctcttcccttcccccgccgtggatcccctccccgagcgccaggacacggtggtgaactacggcggtgaggagggggtggaggagaaggcgctcgtgtgcaggacggtgtacgcgtggcgggagcccgtgtcgccgcacctggcggcggagagggaggggatgccggtggaggacgaggaggtcaggtggctcgtggaccggtggctggcggaggaggacgggggtggggaggtgtggaaggtgctcgagacggccggcggcgtcgccagccctggcccttctggcacgctccaatgtgatctctatcggtcctctaggttacctgcagttcttgttggagatggtcgtctaggtggtatttcatctactttatctgcctacgaaactctgttgctcagaggatatgatgtgggctcagttattttggaagatcgtggcttgtcgaatgacagattcctgctctcatacttgagaaagagggtacctgtgcatgtcctgccaccaattcctgaggatcccaaagacgacctaactgattggttttctgagtcatcctcagcttttagttcacttaaagatagtctgcaatcttttcattcacgaagagttcaaaggctaaacagtatgcagagaaaatcaaagtatttgttgtggtggcctttcactcagcatgatcttgtacctgtagattctgttacagttattgattcgcgttttggtgagaatttctcagcatacaaggttaaagacaaaacgattgttccccagtttgatgcatgtgctagttggtggacacaaggacctgattctaacttacagattgaacttgcaagagatatgggttatgctgctgcaaggtatggtcatgtgatgtttccagagaatgttcatgaacctgctcttcgttgtgcagaacttttgcttggtggtgttggtaaagattgggcttctcgagtttatttttcagacaatggatctactgcaattgaaattgctttgaagatggcatttcgtaaatatgcatgtgaccatgggattatagtggacagcgaaaaagatatcagaagtgaaggaagtgttcattttaaggtccttgctttaaatggttcctaccacggggatactttgggtgctatggaagcacaagctccatcagcttacacatcttttcttcagcagccatggtactcggggcgaggactttttctagatcctcctacagtgtacattaaaaacaaaagcgccaacctttctcttcccccatcgataatgcatgatcaactgagttcttgtgatacatgtttttcctcattaactgaagttttttgcaagaccagggacacatcgtctgctgctaatgtatatgtttcatacatatcacaacaactatcacagtatgctatgtcaaataattcagagcatattgcagcattaattatagagccagtaatacaaggtgcagggggaatgcatttgatagatccccttttccagagattacttgtcaaagagtgtaaaaatcgaaaaattcctgtcatatttgatgaggtatttacaggattttggcgtctcggtgtggagtctgcttcagagttgcttggctgttttcctgatatctcttgttatgctaaattgatgactggtggcattgtaccattggctgcaactttagctacagagcctatttttgaagccttcagaagtgactctaagctaacagcactcttgcatggccattcctataccgcgcatcccatgggctgtaccgcagcagtaaaagctatccaatggtataaagatccctccaccaattcaaatattgatcttgatcgtatgaagctgaaggagctatgggatagtgcactagtgaaccatttatcgtccctgccaaatgtgaaaagagtggtgtccttaggaactctgtgtgcaatcgagctaaaggctgagggatcagatgctgggtacgcatcactttatgcgagttccttaatccgacaacttcgtgaggaggataacatctacgctcggcccctgggtaatgtgatataccttatgtgtggtccatgcacaactcaagatagctgcactcgccagctcgccaaagtgcatcgtagacttcaaaagttgaattga</cdnaseq> |
| Protein Sequence |
<aaseq>MLRLLRHARRHSTSSSSSAAAAAVPLTSPAFAVFGANTGVGKTL VSAGLVASLLASPSPSPSTVAYLKPLQTGFPDDSDARFVFDRAPALLRRLRLAGGGAS TRLVASNHTLFPSPAVDPLPERQDTVVNYGGEEGVEEKALVCRTVYAWREPVSPHLAA EREGMPVEDEEVRWLVDRWLAEEDGGGEVWKVLETAGGVASPGPSGTLQCDLYRSSRL PAVLVGDGRLGGISSTLSAYETLLLRGYDVGSVILEDRGLSNDRFLLSYLRKRVPVHV LPPIPEDPKDDLTDWFSESSSAFSSLKDSLQSFHSRRVQRLNSMQRKSKYLLWWPFTQ HDLVPVDSVTVIDSRFGENFSAYKVKDKTIVPQFDACASWWTQGPDSNLQIELARDMG YAAARYGHVMFPENVHEPALRCAELLLGGVGKDWASRVYFSDNGSTAIEIALKMAFRK YACDHGIIVDSEKDIRSEGSVHFKVLALNGSYHGDTLGAMEAQAPSAYTSFLQQPWYS GRGLFLDPPTVYIKNKSANLSLPPSIMHDQLSSCDTCFSSLTEVFCKTRDTSSAANVY VSYISQQLSQYAMSNNSEHIAALIIEPVIQGAGGMHLIDPLFQRLLVKECKNRKIPVI FDEVFTGFWRLGVESASELLGCFPDISCYAKLMTGGIVPLAATLATEPIFEAFRSDSK LTALLHGHSYTAHPMGCTAAVKAIQWYKDPSTNSNIDLDRMKLKELWDSALVNHLSSL PNVKRVVSLGTLCAIELKAEGSDAGYASLYASSLIRQLREEDNIYARPLGNVIYLMCG PCTTQDSCTRQLAKVHRRLQKLN</aaseq> |
| Gene Sequence |
<dnaseqindica>7723..7894#7013..7125#6277..6411#6007..6138#5530..5663#5055..5201#4863..4978#4551..4645#2668..2816#2396..2516#2166..2243#1808..2069#1433..1603#89..729#ccaacaccagtcggactgtgccaaaaccccgtccaaaaaccgattaccccggcaattaaccccgtccaaaaacccaacccccgccgccatgctccgcctcctccgccacgctcgccgccactccacctcctcctcctcctccgccgccgccgccgccgtgcccctcacctcgccggccttcgccgtcttcggcgccaacacgggcgtcggcaagacgctcgtctccgcgggcctcgtcgcctcccttctcgcctccccctccccttccccttccaccgtcgcctacctcaagccgctccagaccggcttccccgatgactccgacgcgcgcttcgtcttcgaccgggcccccgcgctcctccgccgcctccgcctcgccggcggcggcgcctccacccgcctcgtcgcgtccaaccacaccctcttcccttcccccgccgtggatcccctccccgagcgccaggacacggtggtgaactacggcggtgaggagggggtggaggagaaggcgctcgtgtgcaggacggtgtacgcgtggcgggagcccgtgtcgccgcacctggcggcggagagggaggggatgccggtggaggacgaggaggtcaggtggctcgtggaccggtggctggcggaggaggacgggggtggggaggtgtggaaggtgctcgagacggccggcggcgtcgccagccctggcccttctggcacgctccaatgtgatctctatcggtgcgcgcggttcagcttctgatttatgtcattcttcatttttggctagtcgtagtgaattcaagtacttgaatgtgtatgcgttcgttcaagtagaaattaaattgggtacatttgattactttagcatgttttgtttcgtgcatattattcattcaatgacatttgcttggtcgagctaattgatgtgatgcttgcgctgtatagttcctctacttaggagagctcaacgctagcaaatttcatctgcctcttacagatgtaagagagtaatgtgcacgttgtgaatgaacatattagctatgctaaattgtggcgagcaatcttgttgttttaatattttgtgaggttttatgttctgtacatgttaggatttttcatttgagtagttgatattcatgagctgagtaaatattcatgtcctacatcaatttctatgttcaatttacactactgtacacagtggcatatccatttgtcacttcttttaatatatgttttattcgttcagaagttatcacctgtggtgaactggcaatgccacctaatatttcttatcatgcattaaagtaccgtagataccttgaatttcttagaatgatttatggagaaccttgtaatatgtcaaagttaaactttggtatctctacatgctggtttgctttactttctggtgtaattgatcacatacaactcttaacaggtcctctaggttacctgcagttcttgttggagatggtcgtctaggtggtatttcatctactttatctgcctacgaaactctgttgctcagaggatatgatgtgggctcagttattttggaagatcgtggcttgtcgaatgacagattcctgctctcatacttgagaaagaggtgattaatgcctttctgttctttgtcaaatcactctgaaagtgtgcaggagcatagaagcatctcttttattttaattatattatcctgttaataataattatttcagtctttcatttggatatatgataaacctactgcaacttgcttgtattgtttctgtatttcaatgtatgactgatttgtgctatttctgttatttagggtacctgtgcatgtcctgccaccaattcctgaggatcccaaagacgacctaactgattggttttctgagtcatcctcagcttttagttcacttaaagatagtctgcaatcttttcattcacgaagagttcaaaggctaaacagtatgcagagaaaatcaaagtatttgttgtggtggcctttcactcagcatgatcttgtacctgtagattctgttacagttattgattcgcgttttggtgagaatttctcagcatacaaggtttgccaagcatctaggactattttgtaaaaaggaaaattatgatgaaaatctaatagaattttagttacattgttgctcattcttttggtgcaggttaaagacaaaacgattgttccccagtttgatgcatgtgctagttggtggacacaaggacctgattctaacttacaggttattgtctacacatcttccatcatccgtgaaatttcttgtcttctcgtttgctaagggaactattgttagtagtgttttatttctaaagctctgtatgttgaacttttgacaggcaatttttgtagcctaaatttctctttgctcattagattgaacttgcaagagatatgggttatgctgctgcaaggtatggtcatgtgatgtttccagagaatgttcatgaacctgctcttcgttgtgcagaacttttgcttggtggtgttggtaaaggtatgtgctgtaacttcactatgattttgcataattattatcactgacaaattctaagtacagctgttgtttaatgttacttttatgttactatacaagtcacgttgttgagaaacacttcattcattagacaccttctcttgtatgttagattgggcttctcgagtttatttttcagacaatggatctactgcaattgaaattgctttgaagatggcatttcgtaaatatgcatgtgaccatgggattatagtggacagcgaaaaagatatcagaagtgaaggaagtgttcattttaaggtctgttctggttatatcgaatatccttgtcaatctactttgttttttcaactatattaaagttcactgcaagaaattttttttttccctatagtccatagatgttgaatcgacatgatctctatatgcattgatggcttgatgcactgttgtttcttatgcttttagttgaatgctgggcaatatctgcatagtaacttcaataatcatccagctactcgaatttggcaatacattttctaaaccactagttattttgcatattttcttagtgacaaatgaacaaagtagattttttgcacatgtttgtgtggatttgatgtttaattcattatattttctatgcaatgatcaatggtgtggaattgtttttatttttatttttatttgacatgatgaatgtgtgcattgactggagcgcagcatcagtcttaagtgtgtaatgcatgctaaatttaccttttgattgattcaggaaatgcatttaaaatcgagtaaattgtttaggaatgaaccctttttgtaacagtgcccaaatttccacgtggcagatcgccactgtagaatagtacaggcatcaattttccttatttacctatacctgttggacccctacatgcattctattttcttcctccctggctcagtgcgctccctcttccccattcccctccaattcttatgccatccttgctgatctcgacaatctgtaatgctgatgtcctttcatccctctgtgtgatctgatacaagtctatttaagtgtccatggaagatcatggatggacatggttaatgcatactgcagtagttgatggtttcaccattatagctatcagggccaacgtctaggcccaccagagagcggagttttccagcgacatagctatgttcctggacagctgtagggccagcagttttcacccctctagatgctttaactctgatttagtggcctcttcttcctgcttatcctcctggcgagttcttgcaaggcattagaaactgttgtatctgagctgctcctttacatttcctgatttcacaatacctcatcacttgccacgtctagcagatttttcatctgtgctgtggtcattggcatggcttagatatagctctcataaaacgtggtgaatgttgtggtcatctacccatccacactggcagatattttgtatcaggaaaatcaagttagtagaaccagaactccaaaagactgaaatatggagtaaaactcaaagtatcatgaagtagttacacctccagctcaacaagtaagctgatttctgtgcactattctgttcttttcttttcttatccaccaccatgctcatttgatcacagtgaactgcctatattaaactgactcttggggagaggtgccccacaaggctttgagctcagatcgagaaagccccgaacactgactaccaaggtgcttttcgtgtatgactctgaaagcagctatctcagcgaggatcttttttggtgggacccaggaatcgaaccctggttagcagccccataactaggtggcttaccgccatgctattcacgtgttctcagtgaactacatatgctgaccttgcatttttaaaggaaaacctgtatttacagttcatctcaccattttgtagttaatactaatatgatgaagaaataatgcaatgtggaattcttgctccatgtttcttcttttgatatatgcatttttaattgaatcctctctaggtccttgctttaaatggttcctaccacggggatactttgggtgctatggaagcacaagctccatcagcttacacatcttttcttcagcagccatggtaaccatgaatttcatgtgcattgatgtatctgtagccttcttaagtgatttgctatagcaactttgtttatctgtttatatggcctagtagagatttcttatcttgtcgttaaagcatggtgcatatttttttcctgtactggaagcattatcattgaattttcacttctgaaatcaataaagctgagatcattcacttgagttttgttctgtaggtactcggggcgaggactttttctagatcctcctacagtgtacattaaaaacaaaagcgccaacctttctcttcccccatcgataatgcatgatcaactgagttcttgtgatacatgtcagtaacacaaattttacatgaagttatattttatataggttcttatctgattattcttttgttgggactgcaggtttttcctcattaactgaagttttttgcaagaccagggacacatcgtctgctgctaatgtatatgtttcatacatatcacaacaactatcacagtatgctatgtcaaataattcagagcatattgcagcattaattatagagccaggttactataaatattccctgttttgagtacctcttttccaatatatgatgtcactcatgctgaatttaatctctctatattgtctattctggtactttagtacttgttatgtttggactatacaaaatctgatgctgatattttctggcaaatgtgtgcccacagataactttgcttgtgcaattgcattcacattcactattttaaatcggactaagtatttgtgtgttagggtgggatgtacttcaatagtctaatttggttgcctcttttaatttgtgtaaactctaatataggattttaacatcattaactcttattcatgcagtaatacaaggtgcagggggaatgcatttgatagatccccttttccagagattacttgtcaaagagtgtaaaaatcgaaaaattcctgtcatatttgatgaggtatttacaggattttggcgtctcggtgtggaggtaatgtataaaatatgttcttttggatgattataccttaaaagttactccatccatccaagtttatatggctcacaagtattctgtgattcaaacttagtaagctttgacgaattaggccagctttgtacaggtttagatgtttagtgacataaaagtgtcaccatcacattatcatttcaatgcacttccatgttttggttttcttagtagtaactgcaagataaatttgtggtgaaactacacttcaatggacttgtgccaagtcaaacgacatcttatagaaatggatggtgggggtaactagtgtattcaaactcttgactactttcctctcttccagtctgcttcagagttgcttggctgttttcctgatatctcttgttatgctaaattgatgactggtggcattgtaccattggctgcaactttagctacagagcctatttttgaagccttcagaagtgactctaaggtattcatctaattatcatgaatgtatttttggcatgcacaaacagttcattaacgatttttatgatgttatatcagagagtatcacaaggagtctactcttttaggttaacattgacttatcttttatctgacccagctaacagcactcttgcatggccattcctataccgcgcatcccatgggctgtaccgcagcagtaaaagctatccaatggtataaagatccctccaccaattcaaatattgatcttgatcgtatgaagctgaaggaggtaatgaaaatttgttcactcaattactttttgtatattagagtcaccagagtcagttgttctgatttatccatttgaccaagaaatggttggctgttggcactttgctaagaatgtcctcattttggtcttaatataagtgtgttatcatatattaatatattactatataatatgttcagtttataatttgctcattaaaaagcatctgtgtgttatgtcctttatgatgtttgtatttcaatctatctttcatatagaaatatacagtactccctctgtcccactgaataaggcacatgcctttttgaaattcaactcttcaaatatttgaccaacgattagtctaatataaattaaagtttagttgataaaaataatatcattagttgacatttaaatttactttcacatggttatgatgttgttacaaacattgtagatatgagaaatttaaattcaaagattatttttgaagactctgccaggtttgacagagggagtaatacaatttccaggaacacctcttttttgctaatgctatatacagtcaatttatttaagtatattgacacttaaaagttcactctggtatttgcagctatgggatagtgcactagtgaaccatttatcgtccctgccaaatgtgaaaagagtggtgtccttaggaactctgtgtgcaatcgagctaaaggctgagggatcagatgctgggtatgacaatcttgagtcatttatagctggtgtccttcgctgatattattctatattttttttatataactgctcggttaagagcacccaatgggcagtttagcattctgtgttgtgcttagcttctagataatttagtttcctgttgatattctatgcttgtccaaaaaactagtaatatcatagttttaagatctagttgccaaatagttaggagttgatgcgacctttatatggggcatatgactgttcatttaaacaaaaaaaaaggtaattgacgtatttggaagcagtgaaaatatctagcatccaatgcaaaactggaagttttttttataagaaggaagtacctctatatttgcagatttgcttagcaaataaaatattcaaatacctttgcccctctcataactgtctagattcttaatttagctggttaaccctcagcgtgggtacacaaatctctcctttgccctgcacatattatcttttcaatataatctacgctgttatgtaatacctttaccctttctcgctccagttcttggtactattgttgtattccacttaacatgtttggttctgttattcctgcaggtacgcatcactttatgcgagttccttaatccgacaacttcgtgaggaggataacatctacgctcggcccctgggtaatgtgatataccttatgtgtggtccatgcacaactcaagatagctgcactcgccagctcgccaaagtgcatcgtagacttcaaaagttgaattgagttcgccactaacaatagtgagcagaataatgaggtatcagacagtcccataaaataaaagggtttgtgtccatgccattataattttcgcgttgaattgagtttgccaataatatttaatgagcagaataatgaggtgtcagacagtacccgtaaaataaaagggttaattgtatccatgatattataactttcacggttttgaaatatgtcattactattgacataattggaaccatataaaaggtggggtgtgagacatgctatctggttatgttcacacgagtttgtggcc</dnaseqindica> |
| External Link(s) |
