Difference between revisions of "Os08g0328300"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os08g0328300| Description = ENT domain containing protein| Version = NM_001068094.1 GI:115475925 GeneID:4345288| Length = 6324 bp| Definition =...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os08g0328300|
 
GeneName = Os08g0328300|

Revision as of 20:48, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0328300

Description

ENT domain containing protein

Version

NM_001068094.1 GI:115475925 GeneID:4345288

Length

6324 bp

Definition

Oryza sativa Japonica Group Os08g0328300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:14563962..14570285

Sequence Coding Region

14564284..14564311,14565251..14565462,14565571..14565680,14565760..14566012,14566125..14566334
,14566409..14566477,14568593..14568838,14568919..14568987,14569055..14569118
,14569715..14569830

Expression

GEO Profiles:Os08g0328300

Genome Context

<gbrowseImage1> name=NC_008401:14563962..14570285 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:14563962..14570285 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggattacaaccccgtggacagcagcggaactgatgatgatcttccaccgacatatcagaacagaggtgtaagaggcagtggacgtgttagtggtaatgggagagatattgttagcgctgttccatataatagaactaagccacagacagatatggaaacacaaattcatcagcttgagcaagatgcatattgttctgttcttcgtgcatttaaagcacaatctgatgctatttcatgggaaaaggaaggtcttatcactgaacttagaaaggaacttagagtgtctgacaaagagcacagggagttgttaaacagagtgaacggtgatgatatcattcaaagaataagggaatggagagagacaaaaggtgggcttcaggcagatatggtgaataatgctcaacgttcacatgatcgcgtgcccagccctaccacctccgctcgcaagaggcagaagacgtcacaatccatcccttctgcttctgtacctgtaccatctcctgctgtgcattcacagacactgactgccccaatgcaaccattgtcatcagcaacaaaaaaagtagctccacctggtacaaaaggcaaaaagactaagccaggccagaagataccaggtggctctgcaatcaagaccatgtcttctgctggccctagtggtaggggaccaattatgaataagaacctatcaggtggtcttcctactgaaccaatatcagtaaatccattaatcggacggaaggtcatgactcggtggcctgatgataatagcttttatgaggctgttataactgactatgatccacagctggatcgttatgcactggtttatgacataaatacagcagatgaaacctgggagtgggttgactttaaagagatggcacctgaagatattagatgggaaggtggcgaccctggaataatccagcaaggccgtggcgctactgttcatggtggtaagaagtcaagcagccgtaatggccccatgtcaggtcctggaagggggagcagagggccgcaaaagaacacatccaggaaagagtttccaccttcacaaaatggtgttgggaagaaaagctctgattgcatagaaatactccatacggagtcattaataaaggaggtggagcgggttttcagcgcaagcaaccctgatcctcttgaaatggagaaagcaaagaaagtgctcaaggagcatgaacaatctttgattgatgcaattgcaaggcttgctgaggcatctgatggcgaaagtgaagaaagggcacaacccttgcaacacaaccgtggatggagaaaccatcatggtggaaactatgcaaatgatatgactatcgatggtcacatggttggagatgctgatgccctgtaa</cdnaseq>

Protein Sequence

<aaseq>MDYNPVDSSGTDDDLPPTYQNRGVRGSGRVSGNGRDIVSAVPYN RTKPQTDMETQIHQLEQDAYCSVLRAFKAQSDAISWEKEGLITELRKELRVSDKEHRE LLNRVNGDDIIQRIREWRETKGGLQADMVNNAQRSHDRVPSPTTSARKRQKTSQSIPS ASVPVPSPAVHSQTLTAPMQPLSSATKKVAPPGTKGKKTKPGQKIPGGSAIKTMSSAG PSGRGPIMNKNLSGGLPTEPISVNPLIGRKVMTRWPDDNSFYEAVITDYDPQLDRYAL VYDINTADETWEWVDFKEMAPEDIRWEGGDPGIIQQGRGATVHGGKKSSSRNGPMSGP GRGSRGPQKNTSRKEFPPSQNGVGKKSSDCIEILHTESLIKEVERVFSASNPDPLEME KAKKVLKEHEQSLIDAIARLAEASDGESEERAQPLQHNRGWRNHHGGNYANDMTIDGH MVGDADAL</aaseq>

Gene Sequence

<dnaseqindica>323..350#1290..1501#1610..1719#1799..2051#2164..2373#2448..2516#4632..4877#4958..5026#5094..5157#5754..5869#agctcagctcggccccctcccctccccgctcccaccgcctcccgaatccggcctccaaatctcgccgggatccgccgcgcggccgcacggattcgcctcccggagccgcggctctgtcggcgcgggggcgggagaaggggggcctgctccggcccgggggacgccggatctgggtcggggggtttctcttcgggctcggaggaggaagggcaagtcacggtggcgttagtggtggtggtggttgttgcagcggcggcggttgatttgtgggtgtgattcgtgggcttcttggtgtcggtgtgcctggtgctggtgacgcgccatggattacaaccccgtggacagcagcggtgagcgcattagatttgggtggctagggtttttttttttttttgctactttcttagcttggaataggctacgcttctgggaagaattagtgtcaggattggcattattagggcattttctcctgttatcttgttttactgtattgttttttcttccatttcttgcagattgttagtgcttgttcactagcttgctggaatttgtttatcctagtaggttattatgggcaaatctcgatgataggttattgttttcagctgcttgtttgctgcagaggtcgtaactttggggttgttagtgaatgctgagttgaatgcttcgttaggattagttttggagcttcttttacaggtttctgccaagagaaggttaccattgttgttctaagaaaatgttcgacgcgacactgcaggctttatctaatagtagtaatatgagtgtaatggttgctccctgatttgatctgcggtgtttctagcagctgatgtgttgatggttccattgctacttgttattgaatttaacatgagcatagctcgtgatcagcacaaatgttctatagcttgcacaaacaagtcaacatgatattcttaacataatttacagttcagtaacacgtgtgtgtatattagagctctttttctttcagtataattttagtaccatatgccattgtgtctgggtttcagttcagctaaatggttgtacaatcattaataaatagctaaacccttaacttgtgagcatattatctttcatttccaatttgatttgtgttgctcaattgactagcatgtgaaatggttgtacaatcattaagaaatagctaaacccttaacttgtgagcatataatcttatcagtaactggcttaaatcagtctaaatgtataataaaaaaatcgagattgtgtgctaagcaatttattatttgttgcaggaactgatgatgatcttccaccgacatatcagaacagaggtgtaagaggcagtggacgtgttagtggtaatgggagagatattgttagcgctgttccatataatagaactaagccacagacagatatggaaacacaaattcatcagcttgagcaagatgcatattgttctgttcttcgtgcatttaaagcacaatctgatgctatttcatgggtaaaacaccacttaactctgtcattcttcatcttcatttggtgtaatcgttagcagttcttttttccgcaaaactgaccaaaagacaattttgaattcaacttctaggaaaaggaaggtcttatcactgaacttagaaaggaacttagagtgtctgacaaagagcacagggagttgttaaacagagtgaacggtgatgatatcattcaaagaataaggtataatattgggcagatacccatttttaatggcacaatgcatcttttgttttcttaacttcagacatttttattcaagggaatggagagagacaaaaggtgggcttcaggcagatatggtgaataatgctcaacgttcacatgatcgcgtgcccagccctaccacctccgctcgcaagaggcagaagacgtcacaatccatcccttctgcttctgtacctgtaccatctcctgctgtgcattcacagacactgactgccccaatgcaaccattgtcatcagcaacaaaaaaagtagctccacctggtacaaaaggcaaaaagactaagccagtaagtgatggttgaaatctgctgagacaaaccctaagacttctctaattgtgatgttgtaatatgaccttatttatttgttttttttttttttttgcaattttgcttgaagggccagaagataccaggtggctctgcaatcaagaccatgtcttctgctggccctagtggtaggggaccaattatgaataagaacctatcaggtggtcttcctactgaaccaatatcagtaaatccattaatcggacggaaggtcatgactcggtggcctgatgataatagcttttatgaggctgttataactgactatgatccacagctggtatgttttattcatacgtgattaaatttatctttgtttgaagtacttctgatgtctgttctcattaatcataggatcgttatgcactggtttatgacataaatacagcagatgaaacctgggagtgggttgactttaaagaggtaaattcccttttattgtgattgacttctgatacttcacgacttagtttgctgttggtatggtactaggctgtgttcgtttggtgaggttgggaactcagctcctctgcacgcaaaacggagcgactcattagcgcatgattaattaagtatttgctattttcttgaaaaatgaattaatatgattttttaaagcaactttcatatagaaactttttgcaaaaagtgcaccatttagcagtttgaaaagcgtgcgcgcggaaaatgagggtggtgagttgggaactctctgaaaggaacacagcctaatgcaccaacgaaatacgaactttgcaaaagctagaaaaatgacatgtcatgacatttaaaatttaagtgggaaactattgtatagcttggtatctatgtagttatataattaatatggaaaactatgtttgttatatggatgcttttttaccttcaagtggatagaacaagaagatgactgttatatgttttcatcttgttataacctattccctctgttcctctttaattttcaccatgcacaagacacaaatactgatacttagcattttccctatatatgactaaaatgccctttgctttattttattggtaaaagtacagaaggtgcactgctcaacgttttacatgctcctaccgctgtactaatggtgcctggctaggtacaacaaattaaaaatcagatactagaagcacccaccctgcatctgatgttagggtgtgtagcacgggggcaaaatttgaaattagtgtgttggaaaacgtggagtgacatgtaacatggaacaaaaataaactagaaagggggagcgattacttgcagataatatgactttattctattgttaactgtaaaagaaaaggcaattatgctacttggatttttcattgatgtggaactatgaccctcagatatcctgtttgttttccttataagaagttttttttcgctgaatatcaacaatgaacaaatattttcattgctgaacttttgaagggccaatatattgtgttttcagattccattgtatttgtgttctggtagtttgcttttggagttaattgcctcagggtgcacagacttgtttggtggatgcgaataggtgcaacaacatgtgaagcgccagttctggtgcaataacttgcttactttgtggaaatcagggtcaaaatgcaagcatattagcgcttttcaatgctgactagcatgccatatcagcttgtatgtaagtaggacgcatgtagtattgtcgttttgcataaaaccacccgtgcttgtctgttatattccccattgctctggtcctctgccaaaccgttttgttgacagccctttgatggctgcgaaggaggactgggctgaagagacaaggcatatgattgatcaggaattctcaataggtgacctgcagatcgaatcactgcaaggatgctagcatagcgatcagcatggtgccatgtcaacttgggtggcaaaccttgttagcagagcaggaagacgctggcactccaatggcaaagcgccccatcctctagcatacaatgttgatttcttgccatcacgattcgaatacagttagtgatgaactgcaagtgtgtcctcactcactggctcactggctcactgctgcatccatatcacgctacttcagctcaataatcctgcgtggctctttttggccctagttccaacagtctaatcaaattgttgcactggatcaagcattttgcttgttggtgtacctatttgtgccctccaaacaagttcatgcaccatgggcttagcttaccctttcttttctttccaacatctagtatttaaaaatcttagtatttcaacaccaaatcaaaactttgtattatcttataggtttatgcaaatttccttcttttggagggcacaatatttaattattttgagttcaattctagcgagctagatgatattagtttttttgtttctgcattagcataggcagcacaatatatgtatttctttatatgtgtttgacaaaagttaccattgtatttaagcaagaaacaaggccttttaatatgttcgttatttcttgtccttgagtgcagatggcacctgaagatattagatgggaaggtggcgaccctggaataatccagcaaggccgtggcgctactgttcatggtggtaagaagtcaagcagccgtaatggccccatgtcaggtcctggaagggggagcagagggccgcaaaagaacacatccaggaaagagtttccaccttcacaaaatggtgttgggaagaaaagctctgattgcatagaaatactccatacggagtcattaataaaggaggttagtttggaagaaactttgcctgtttgtttagaccatgcaagtgttatctgctctatgatgataatctacttatctaggtggagcgggttttcagcgcaagcaaccctgatcctcttgaaatggagaaagcaaagaaagtgctcaaggtaaacatggaaatgtaaaatattatggttaggtgcccttaaacttaactaatagacattattgcaggagcatgaacaatctttgattgatgcaattgcaaggcttgctgaggcatctgatggcgaaagtggtaaatactagtctttgttgcctgtctgttccaatagaaatgacttgactttctttctaagctggagaaaccatccaccgttacctaggatgattgcctaaaaaatcaaggatcaagccagtgtctagtgcatagcggttcctagatgtcacctaggaccaactcgactagtgaatttcaagcaattagcaagcatattacataaaaattagacatgagaacactaaaatagcagcacaagagcccctagggcatgttagcctcctttcactatctaatgcctaattgcgtggttatatgtggtgcctatgcaatgcctagggctgacttttatagcactgctcaaaatataggcatttcaagtttaaccatgcttgaacaggaagcactcgttttagctatcttctgtaaatcatcacactaggcactttcaatatcatactgtagatgatcttaccagaacttctatttgtggtgtaagtgctctccgtgagcactaacagaaagtagctttggcattcagtaaaaaagaaattaacagaggtgcatcaatttatttattgacacgctcctctcttgtcatatggttgaagcagaagaaagggcacaacccttgcaacacaaccgtggatggagaaaccatcatggtggaaactatgcaaatgatatgactatcgatggtcacatggttggagatgctgatgccctgtaaacaattactgaactgtatacagaaccctttttttatctattgtataacttcaatgctgatttattctagattagcactaggttcaaaagtatcctctaattgtttcaaatgagtttatctgttatgatgggcctctcgaattgtggactttcggaaaatcaatattggtgagaggagagcgttttgtagaattgtagtctagcagatcatgatgacactgtaaatttagatgtggagatatttttggtgtcgtactactttcagatgtgactactcactggagatgtatgttgttttgtactcgctagcaagcagaacacgcatttttttttgtttttttttgcaatgtttctttgagccatggttgatactttttagaaagggtaatttggaaccatgccattataatttttcaaagtttgagatatgccatcggtatctcaatgtttgttatg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0328300, RefSeq:Os08g0328300