Difference between revisions of "Os08g0387500"

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(Created page with "{{JaponicaGene| GeneName = Os08g0387500| Description = Similar to Sulfated surface glycoprotein 185 precursor (SSG 185)| Version = NM_001068249.1 GI:115476235 GeneID:434546...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os08g0387500|
 
GeneName = Os08g0387500|

Revision as of 20:49, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0387500

Description

Similar to Sulfated surface glycoprotein 185 precursor (SSG 185)

Version

NM_001068249.1 GI:115476235 GeneID:4345464

Length

2546 bp

Definition

Oryza sativa Japonica Group Os08g0387500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:18397603..18400148

Sequence Coding Region

18397641..18398073,18398150..18398430,18398727..18398994,18399206..18399243,18399706..18400146

Expression

GEO Profiles:Os08g0387500

Genome Context

<gbrowseImage1> name=NC_008401:18397603..18400148 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:18397603..18400148 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cgacccattcccccatctccgcgggaaacaaaccggagctcgccttggcctcgccgccggcctcctcctcctcctccatcgccgcacgctctccctccgaaccctaaccctagctcgctcgctccggggtcccgggccatgctctccacggcggcgccatcctcaacctccctcgtcgcctcgttcccgtcacgcgcgcgccggcgggggctcccgggccgacgcggcgtggtcgtcgcggccgcgggggcggggccgggggcgggggcggcggagaggttcgcggcaagcagcagctccatcaccgactacctgcggtaccgccgcccggggtccgccgggggaggtgggggaaccggggtgtgcggcggggagctgcagacggcggtggtgcggtacgagaagcggctcccgtggtcgctcatccaccccttcctccatgttgatttggtttctactgtccacattgctgacaaagaatacttcgatagactccagcaagcacttcaagattatgattgtgttctttatgaaatggttacaagtcgggagaacttaaacaatcgcaaggacccaacctttgcgaagaagctgaaatcttcacgtaggggattcagtattcttggcttcatacagaagcaaatggcaaacatcctttcattggattaccagctagattgccttgactatggcagtgaaaaatggcaacatgctgaccttgattttgagacattcaagcagcttcagagtgaaagaggtgaaagtcttttcacgtttgcggtagacatgacactgaaatcaactaaagccttggtacaaccaacattgcctgatggtcttgacttctggaggtctaagctgctttgggcctcacgtgttctaccaatgcctcttgttggactgttccttatcagtgggctttgcttaccaatcgacgatcaaggtggatatcctgagcttgaagcattgtccaggctagattttggagctgcactgaagatttttctggctaagcaattgacctccgatttcacatctatgacctcacccattgaggaaaagtcagttatcattggggaaaggaatagagttgctactgagaagatacaggaagcaataaaccatgggtacaagagaatagctgtcctttatggaggtgggcatatgccggacctgggaagacgtcttcgtgaagagctcaatatggtcccagctgacgtccagtgggtgacagcatggtcaattagaagccgggagctagacagggaatctcttccattcctgaagaccatggctgaagtctcagggtggcctttgaatagatacgagacacttgctctgcttatcttttcttcagttctcgcagtggatctttggttctgggagcttcttgtgggtactgccgtgaactgggcatctttggctggctcatggattgaacaatttaatggtccattttga</cdnaseq>

Protein Sequence

<aaseq>RPIPPSPRETNRSSPWPRRRPPPPPPSPHALPPNPNPSSLAPGS RAMLSTAAPSSTSLVASFPSRARRRGLPGRRGVVVAAAGAGPGAGAAERFAASSSSIT DYLRYRRPGSAGGGGGTGVCGGELQTAVVRYEKRLPWSLIHPFLHVDLVSTVHIADKE YFDRLQQALQDYDCVLYEMVTSRENLNNRKDPTFAKKLKSSRRGFSILGFIQKQMANI LSLDYQLDCLDYGSEKWQHADLDFETFKQLQSERGESLFTFAVDMTLKSTKALVQPTL PDGLDFWRSKLLWASRVLPMPLVGLFLISGLCLPIDDQGGYPELEALSRLDFGAALKI FLAKQLTSDFTSMTSPIEEKSVIIGERNRVATEKIQEAINHGYKRIAVLYGGGHMPDL GRRLREELNMVPADVQWVTAWSIRSRELDRESLPFLKTMAEVSGWPLNRYETLALLIF SSVLAVDLWFWELLVGTAVNWASLAGSWIEQFNGPF</aaseq>

Gene Sequence

<dnaseqindica>2076..2508#1719..1999#1155..1422#906..943#3..443#gacgacccattcccccatctccgcgggaaacaaaccggagctcgccttggcctcgccgccggcctcctcctcctcctccatcgccgcacgctctccctccgaaccctaaccctagctcgctcgctccggggtcccgggccatgctctccacggcggcgccatcctcaacctccctcgtcgcctcgttcccgtcacgcgcgcgccggcgggggctcccgggccgacgcggcgtggtcgtcgcggccgcgggggcggggccgggggcgggggcggcggagaggttcgcggcaagcagcagctccatcaccgactacctgcggtaccgccgcccggggtccgccgggggaggtgggggaaccggggtgtgcggcggggagctgcagacggcggtggtgcggtacgagaagcggctcccgtggtcgctcatccaccccttcctccatgtaagcctttttgatcgatcgaagctacttgactccgaattctggagaatttctgtacgaatctgaactcgtcttccgtggggatgggaattggtgttgtgcggggtgcttgccagaggcagagaggctcacctgattcgtgtttttattagttcccaactagaacaattctacgcgctcacatccactctgacagtttcaatcaacttgttgaaaatactgccctgccgggctgcccctgggttctgatttactactcggcctcctcacattttggatttttgtttttaatatagtcgtagtgagctatcgacatagatgaaatggagtgatttcctttttgtgagttagctttgcatttgattgattacaaattccaagtaataaagcacttcgtaaacttctgtgacttcccgattagcttattgcttgtggttgattgtgaaattctgtttgctgcaggttgatttggtttctactgtccacattgctgacaaagagtatgtgctctaggcccttttatgtttaaccattagtgtctactggcattcagatttgttcgcatggaaaaaaccttgtctatggcataatggcaatcatcatttgcttatctgagcataccctgtgctcatttccatttgcacaattttgtagtatatgcacaattcactactaagtgcattagctgaaatctacagttttgtttgacagatacttcgatagactccagcaagcacttcaagattatgattgtgttctttatgaaatggttacaagtcgggagaacttaaacaatcgcaaggacccaacctttgcgaagaagctgaaatcttcacgtaggggattcagtattcttggcttcatacagaagcaaatggcaaacatcctttcattggattaccagctagattgccttgactatggcagtgaaaaatggcaacatgctgaccttgattttgagacattcaagcagcttcaggtaataatgtggttacagtatcccttttgctgcctgcaacttttcccttgtcataatagctagagaataagaagtgtgctctttagattgctttgtgttattactgttggagggagatgttactgccttgggtttccatttgtcatagggtgtaggtttcaccttgatttgcaaactgaatatagcctaaaaccatttaaagccatatacacactattctgtagtccgtgctttctgccatggcactttcaaatttcaaatatactaaatgctaatttaccttccatttctgtcagagtgaaagaggtgaaagtcttttcacgtttgcggtagacatgacactgaaatcaactaaagccttggtacaaccaacattgcctgatggtcttgacttctggaggtctaagctgctttgggcctcacgtgttctaccaatgcctcttgttggactgttccttatcagtgggctttgcttaccaatcgacgatcaaggtggatatcctgagcttgaagcattgtccaggctagattttggagctgcactgaagatttttctggctaagcaattgacctccgagtgagtaccctctgtatccagtaaggaaaactatgcattaacaaactaattcttatttgcactctgtattttgtagtttcacatctatgacctcacccattgaggaaaagtcagttatcattggggaaaggaatagagttgctactgagaagatacaggaagcaataaaccatgggtacaagagaatagctgtcctttatggaggtgggcatatgccggacctgggaagacgtcttcgtgaagagctcaatatggtcccagctgacgtccagtgggtgacagcatggtcaattagaagccgggagctagacagggaatctcttccattcctgaagaccatggctgaagtctcagggtggcctttgaatagatacgagacacttgctctgcttatcttttcttcagttctcgcagtggatctttggttctgggagcttcttgtgggtactgccgtgaactgggcatctttggctggctcatggattgaacaatttaatggtccattttgacatctaatgggcagaagcaaaagaaaaaggaaacaaac</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0387500, RefSeq:Os08g0387500