Difference between revisions of "Os08g0388900"

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(Created page with "{{JaponicaGene| GeneName = Os08g0388900| Description = Similar to PGT-1| Version = NM_001068252.1 GI:115476241 GeneID:4345469| Length = 2561 bp| Definition = Oryza sativa...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os08g0388900|
 
GeneName = Os08g0388900|

Revision as of 20:49, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0388900

Description

Similar to PGT-1

Version

NM_001068252.1 GI:115476241 GeneID:4345469

Length

2561 bp

Definition

Oryza sativa Japonica Group Os08g0388900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:18464949..18467509

Sequence Coding Region

18464949..18465047,18466181..18466302,18466617..18466686,18466777..18466926,18467023..18467158
,18467247..18467343,18467440..18467509

Expression

GEO Profiles:Os08g0388900

Genome Context

<gbrowseImage1> name=NC_008401:18464949..18467509 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:18464949..18467509 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggggcctggtggcagcgtcgctggttcaaatcgagcccaactctgcacaagacgacgcccacccataggcccaagacgagcccaactctgcttctggttgagcgtaccaaaagcaggcctcttgcatcaggtattctaacacctacgcaaggagtgggtttcctcggattccagcttttactgggattaccaattcttctccaactaaataacttaagccaaatacttggggtattttcacttcttttggtcttctcttatcccctgatgaagaggttcacatattggcctcaggcatatcttggcttggtattcaactggggagctttgataggatgggctgccatgaaaggaaccatagatccagccatcatccttccgctgtatacagctggtatatgctggacactggtgtatgataccatatatgcacatcaggataaagaagatgacgtcaaagtaggagtcaagtccacagcattaaggtttggagattcaaccaagccctggatcagtggatttggtgctgcatgcattgccaatttagcactcagtggctataatgctgaccttgcatggccttactacccttttctggcagctgcatctgcgcacttagcatggcaagtttcaactgttgatttatctgaccgcctagattgcaacaggaaatttgtgtccaataagtggtttggagctttgatatttggtggaattctatgtggacgacttgtatcatga</cdnaseq>

Protein Sequence

<aaseq>MGAWWQRRWFKSSPTLHKTTPTHRPKTSPTLLLVERTKSRPLAS GILTPTQGVGFLGFQLLLGLPILLQLNNLSQILGVFSLLLVFSYPLMKRFTYWPQAYL GLVFNWGALIGWAAMKGTIDPAIILPLYTAGICWTLVYDTIYAHQDKEDDVKVGVKST ALRFGDSTKPWISGFGAACIANLALSGYNADLAWPYYPFLAAASAHLAWQVSTVDLSD RLDCNRKFVSNKWFGALIFGGILCGRLVS</aaseq>

Gene Sequence

<dnaseqindica>1..99#1233..1354#1669..1738#1829..1978#2075..2210#2299..2395#2492..2561#atgggggcctggtggcagcgtcgctggttcaaatcgagcccaactctgcacaagacgacgcccacccataggcccaagacgagcccaactctgcttctggtagtttcctactacaacactgctggtagggatgaaaacgtcgggaagacgtctcaaccattttcataacggagttgctagaaatatggcgccatatgctatagtcgattttttttcagccacttacacagtagttatacctcatttacaccccacttacatatgtaattagtatgtaattttcgaatttacatatgtaattttagtacttacatatgtaattttgagacttatattgtaaatacactaaaattacatatgtaatttatggacttacaatgtaaatacatgccgactattttttgatgaaaaatatggctccataaatatagctacactcttttcataatcatatttttcttataaataaagccaaaaatagtaaatttagaaataaaaccaatattgaaaatatcgaaaaactggaaatagaactatacggacagaaaaatattagcgatcggaaacttgtaataaatgtcagaaacatttaactataaaatatcacatttaactttacttaactatataatatgatgaaataagtagttatagattatcttcattttaaccttgtgttcaagttagtgatttggttgaggagttgatggatctctaaactatggatgaaatacagaaatggaccataaatattggcgtatttagaaataccatgattaccataagaatacagtaatattcggaaatggtcggtataatcgtttctgtttctgttctcatatttttcaccattttcatttttgtttcttgttaaccattttcatattgcttgacctagccgtaaaaatcgaaaacgaagcatcgactggttgggaatttccatggccacttttactccttcagtcacaatgcccgagcaaaactgcattactagtagtattactgtagtagtggcactactgcaagtctgcaaatctgctcctctgatttggagttcagagaggctgaaacctgctcggatcgatcaaatgccatcatgatatcgccagttgcttgaagaacagtgtagggaagtagtaaaccagcaacataaaataaatttacccattgatgagatttaacgcttggatctttgatatgagggtcatttttgtattgttcttttcttgtaggttgagcgtaccaaaagcaggcctcttgcatcaggtattctaacacctacgcaaggagtgggtttcctcggattccagcttttactgggattaccaattcttctccaactaaataacttaaggtacatttggccttgtttgactgaaattgatgcagttaatttgaatgttttaaatgtatatagtatagcattgcactgttttgtgcagaaaagaacaatgagatattcggttattttggtagaattctttgccttttaagtttggaatgcaaaaattgaatatgtttaagtcaattttacttttgtgctgtgttttctccttcttaataaaatgacactcggctcgacggctctcatgcgttgtttggggaaaagaacacttcacaaaactcaaagggtctttactctatcttttatgatatttgtttgtgcagccaaatacttggggtattttcacttcttttggtcttctcttatcccctgatgaagaggttcacatattgggtatgcactaattaattaagcatgtggattcttaataatgtgaaattatttaccgaggatgatccaacaatttcaatgcatttgttacagcctcaggcatatcttggcttggtattcaactggggagctttgataggatgggctgccatgaaaggaaccatagatccagccatcatccttccgctgtatacagctggtatatgctggacactggtgtatgataccatatatgcacatcaggtgacttactaatggcattattttttttttcatatttgatcttagtgatgccatctttgtggatgtttgctaatttcttatccaactatttgataggataaagaagatgacgtcaaagtaggagtcaagtccacagcattaaggtttggagattcaaccaagccctggatcagtggatttggtgctgcatgcattgccaatttagcactcagtggctataatgctgaccttggttagtgaacattatcagaatgtcttgtttagtgaaatatttgttggtatgcaagatattgactgcggactttcctcacattggacagcatggccttactacccttttctggcagctgcatctgcgcacttagcatggcaagtttcaactgttgatttatctgaccgcctagattgcaacaggaagtaagttgttccttaatttacatgaaacagaagaaatcagttaatcttgttatctatgagattattaactttcttagctgaaatggttctctgcagatttgtgtccaataagtggtttggagctttgatatttggtggaattctatgtggacgacttgtatcatga</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0388900, RefSeq:Os08g0388900