Difference between revisions of "Os08g0433100"

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(Created page with "{{JaponicaGene| GeneName = Os08g0433100| Description = Protein of unknown function UPF0016 family protein| Version = NM_001068406.1 GI:115476549 GeneID:4345649| Length = 3...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os08g0433100|
 
GeneName = Os08g0433100|

Revision as of 20:50, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0433100

Description

Protein of unknown function UPF0016 family protein

Version

NM_001068406.1 GI:115476549 GeneID:4345649

Length

3871 bp

Definition

Oryza sativa Japonica Group Os08g0433100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:21088082..21091952

Sequence Coding Region

21088734..21088859,21088933..21088977,21089095..21089163,21089710..21089757,21089839..21089875
,21089972..21090060,21090604..21090651,21090739..21090798,21091650..21091718
,21091830..21091850

Expression

GEO Profiles:Os08g0433100

Genome Context

<gbrowseImage1> name=NC_008401:21088082..21091952 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:21088082..21091952 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgccgtctctgctcggggggttcaccaagtcgctggccatgacggtgctctcggagatcggcgacaagaccttcttcgccgccgcgattctggccatgcgctatccccggaagcttgttcttgctggttgtctcacctcattaacagtgatgacggctctatcagtttcacttggttgggttgcgccaaatctgatatcacgcaaatggactcatcatgtgaccactctgctattctttgtgtttggcattttgtcattgtgggaaggcttcaaagaagatggagattcagaagaattggctgaagtggaagctgagctggatgctaattttaaaagcaacaaagcagaatcgaaaagtaaatctaaggcaaatgatgataaaaagaagcagcaaagaccatttgttttgcagttcttctcaccaatctttataaaggcattttccattacattctttggagagtggggtgataagagtcaaattgctactattggtttggctgctgatgaaaatccattcggtgttgtcctggggggagttctgtacgagctacatcttctgtttcccttacactttttaaatggtttattatgtggtcctgactaa</cdnaseq>

Protein Sequence

<aaseq>MAPSLLGGFTKSLAMTVLSEIGDKTFFAAAILAMRYPRKLVLAG CLTSLTVMTALSVSLGWVAPNLISRKWTHHVTTLLFFVFGILSLWEGFKEDGDSEELA EVEAELDANFKSNKAESKSKSKANDDKKKQQRPFVLQFFSPIFIKAFSITFFGEWGDK SQIATIGLAADENPFGVVLGGVLYELHLLFPLHFLNGLLCGPD</aaseq>

Gene Sequence

<dnaseqindica>3094..3219#2976..3020#2790..2858#2196..2243#2078..2114#1893..1981#1302..1349#1155..1214#235..303#103..123#cccccccccacccccaacccacgcctccctcgcatcgcccctccccgaccccgccgagatcggagcaggcgccgcctccctcctcccgcctcctcctccgccatggcgccgtctctgctcggggtcagctccctttcctcctcctctctctcgttgcgagtgtttgctgcgcaaacgaaggatgtgacggggttggtttgttggtttgtttgtttgtttttgccgctggtgcaggggttcaccaagtcgctggccatgacggtgctctcggagatcggcgacaagaccttcttcgccgccgcggtacgccttctttttccaccttgctcgctcgaccctgttcgttctgcttgtctcagaagggtgtggatgcgcgcgcggggtgttcgacgatatgcctccctcgggtgccgatgcgcagtcatctctcctttttctctttttttctcttgttggaatgcggcgatgtgtgggtcttggctcgtttcttggtggtgattggattggggtcaaggggaagctgggactgtagctgtgaatctcggtgaagtagtaaagcaggtgagcggtgtgtatccaattacaggggaccaattcatactgtttgtttgctaagaacgggatcttctacttagccaagattgtgagctacgttttgttcccgttcctctgtccgctggtgaatttggctaggaattgcttgtgttctcaaatggtcccatttatctgtggctgggaactctcctgttcacctctccacttctccagctggggttctatgcagcgcccatgttggcacagagatagagagagcatttggtttcttggacggttgtgaatttcctcacctgccacatgagttggccactcctttttctgcaaggctgctgctagttttaatgagatgcttgtcctcttccacacaaaattttttcaccgggatagtaaccttagagagagtgaggcaccggtggttagaatgttgcctcttcaggttcagggggctgtgggtttcagagcgtctgacatagcaagacgaacatattcctttctagtgatacactccactctgaaaagcttttgttctccttttgcttggacggctattatttgagcactgctttacttaccctttttacatctacctttgtaagattctggccatgcgctatccccggaagcttgttcttgctggttgtctcacctcattaacagtgagtattttcaacaaaaaaaaatcattcatcagtatagggtcatactttttgtgtgcttatttgtgttgaattttaaaaatacaggtgatgacggctctatcagtttcacttggttgggttgcgccaaatctggtaagtcactgtaagaaattattggacctactataaaattagcacatcaagttttttttttactatgtctaaaggcttccacgtattcttggcacattatgtatacatatatttgtcgaaatatgtgttttccccacctggactgcatccacattggatcagaccctgtcaagtggcccttgtgctaaacagctgaactcagcgagtgctgcttacattataatatggttaatgggttgataatttttgaacagcaaacccagtaaaagtgggatctaaagaaatcataccaatgtcttgctaaataggtgttcatattctatttgacaatgatagtgtaataaactttttttctgatggaacttccatttttatattgatagtcctcacaagtacagtagttaagcatggatgggtgatacactcactggtaccttagggtggatagtactgaccctgttcctgtcagctgtattgttgcaatgaatttgccaaattctttacattgcaagatattgcaaatgatagtattgtattgaacagatatcacgcaaatggactcatcatgtgaccactctgctattctttgtgtttggcattttgtcattgtgggaaggcttcaaagaagatgggtacttaactgcttctttgccattcagttaaccttcagctactaatatttggtcttttagtgagtgactttagtaattgaataacttaccatgcagagattcagaagaattggctgaagtggaagctgagctggtcagcaaactttatccatgccttatgttatagtggactgtagttcaagtaacctattgctaagttttgcctaattttcaggatgctaattttaaaagcaacaaagcagaatcgaaaagtaaatctaaggtcagtttacaagaggcgtgcccattattaatcactttttgtgctcctttcattgctgtagatttttctacttgtgtaccgtgaaaatagaagtcttgagctcctttcttttcccatccttactcattatctctagatatattcagctatcaaaatttttgtgtacttaagagaattcttaagaacaatatatatgtagagtatgttgaagtagttcaatgcaaaagtcaatgtgaagatttgatcatgtgtactacacatgttttgtgcacattgtacatactttaacatgacctagatttgtatatatttttacaaccttttgaattatataaataggaaatttggaaagaggtgaaaactagccgaaattctctatttgtttcgatgtttgtgaacagaagtaaaaaaagcagctgttattttggtgataggcaatataaaaaaataattattgatggtaatcctggcttgtttacccttttcaattggtcaactttgtttttcactattaatttgatgcaactcatccttgttcaattttaggcaaatgatgataaaaagaagcagcaaagaccatttgttttgcagttcttctcaccaatctttataaaggtacgaactagtactgattaagtgattatatgcacggtatatttgacaaaagatacggtgctcgtgttttttctggaattttaacaagctcgtttgtactttgtaattgtgctgtaggcattttccattacattctttggagagtggggtgataagagtcaagtaagttcaacttctgccttgcaatgcagtcaagcacttgttaattagctaataattctgaatctcttctcagattgctactattggtttggctgctgatgaaaatccattcggtgttgtcctggggggagttctgtacgagctacatcttctgtttcccttacactttttaaatggtttattatgtggtcctgactaaacctactactgtgcatagggcccaagcactctgcactaccgctgctgttatgggtgggaaaagcttggcctctcaaatatctgagaaaatggtaggaacaattgcttcaccctgcttttgtactgccaatggagtgccaatgctctgcatctgatgcaatttttacttatcttatgtaggtcggattgtcgagtggagtgctattcctgctgtttggtatcatgtcatacttgtcaggaccagaaggagaattataatgcccccagaaagtcatgcataaggagaattatcatgttcatcatggccggttaacaagcttgttttcactacgacttgatctcatcttagtaggtggacgatggcgacgaaagcgctgatcctttgcaaggaggatggcgattacttagcttagtcaacacattgtaaacatttcactcatcattcataaataacaagatggtaccaaagactctactggttgcttcgtgttagtcccagcaccagacaacattcagccaaaactgtcggagtagttgctgcatactaccatactatttttttggtcgcaactatgcataagaactgctagtcttcggactaaattgcctggactgaagaggggttacaaatcataaaaagtgatttcagaatt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0433100, RefSeq:Os08g0433100