Difference between revisions of "Os08g0440000"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os08g0440000| Description = Vesicle transport v-SNARE family protein| Version = NM_001068435.1 GI:115476607 GeneID:4345680| Length = 3357 bp| D...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os08g0440000|
 
GeneName = Os08g0440000|

Revision as of 20:50, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0440000

Description

Vesicle transport v-SNARE family protein

Version

NM_001068435.1 GI:115476607 GeneID:4345680

Length

3357 bp

Definition

Oryza sativa Japonica Group Os08g0440000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:21488085..21491441

Sequence Coding Region

21488289..21488402,21488497..21488610,21489431..21489592,21489816..21490043,21491179..21491214

Expression

GEO Profiles:Os08g0440000

Genome Context

<gbrowseImage1> name=NC_008401:21488085..21491441 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:21488085..21491441 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggcgtcttcctgggacgccctccgcaagcaggcaaggaggctagaagctcagttagatgaccaaatgagtgcttaccgtaaattgatttccatgaaatctgatggttctgagaatgatatcgagtccgatatagaaagatcgctgaagcaacttcagcaagtaaattctcaaatgcagacatgggtatcatcaggaggctcagaagtcctttctcatacattgactcgtcatatggagatattgcaagaccttacacaggaattctatcgcctccgatcaagccttagagcaaagcaacaacatgcttctcttcttgacttgagagattttgacagagcgaagtttgatgttgaagagggtgctgactctgatcaagctctgctcaaagaacaagctgcgatcagcaggagtactgggcagatggataccgtgatatcacaagctcaagctacattaggcacacttatgttgcaacgatcaacatttggtggtattactacgaagataagcaacgttagcagtcggctccctacgattaatcaaattctttcatccatcaaaagaaagaaatcgatggacaccattattctatccctggttgcatctgtttgtgcatttcttatttttatctattggatgtcaaagtaa</cdnaseq>

Protein Sequence

<aaseq>MEASSWDALRKQARRLEAQLDDQMSAYRKLISMKSDGSENDIES DIERSLKQLQQVNSQMQTWVSSGGSEVLSHTLTRHMEILQDLTQEFYRLRSSLRAKQQ HASLLDLRDFDRAKFDVEEGADSDQALLKEQAAISRSTGQMDTVISQAQATLGTLMLQ RSTFGGITTKISNVSSRLPTINQILSSIKRKKSMDTIILSLVASVCAFLIFIYWMSK</aaseq>

Gene Sequence

<dnaseqindica>3040..3153#2832..2945#1850..2011#1399..1626#228..263#tcggcacccgaattgctctctgctcgtccatcgtcgtcgtcttcgtccaacgctccaactaaccacccctcccgtttcgtcctcccctctgcgttgcgtcctacttactctctccgattctctcccctccttccccgataggggagagatccagcagcggcagcagccaagcccaagctctcccaccgagatcccccgcgcgccgcgccccgtcggccgccgccgccatggaggcgtcttcctgggacgccctccgcaagcaggtgagccgtcaactcccctccccccacccccgcctctctctctctctccacagtctcggctctcgtcgacctgacctccccacccgtggctcgctggctccgattgcccgctcgctgaagctcgagatctggctggtcgtcggagttgcgtgttacatttgggcttttgcgcgggggggggggggggggggggtgggtgttggttggcctcggagttgtactttttctagtttatctgcgaattcgaccggtgcgggggcgcgaatttcccgctgaagagagggttgtacttgtataccatgggaatttgttccttcctgtggaggcttgagcaggaggcgtgatctagatggtgtcggagcgaaaacattgctgcaattcatacaaagctccatgttgaggtgcacttgtggcatgtattttcactatctgtctagtgctgcgaagtgcattgcgcaactagttgctgtagcttatgaggctgtggcatccttttgtagtttctaattactgtgtggggggtatcattggtgtgtgatactgtgatgcaatcgaaattcaaaacggctaagtttagactgcacatagagccaatggagttttggatgacttggctgttgggtgttggcacttgttgacatggatgatgcatgcgggatgagcgtcatttcggtgttctgactttacactggatgtttctgcacaaagtaaacgagtgacggcccaatacaagcctgtgttaggaaagaattcataccgcattaccaaacccttcttttttttcgcatatagttgccatgaatcacgctcgaaaatggaaaaagaaaggtaaacccgtgatactgactgtgtaactgaaaacagaatgaaacggatctgtcagatctacgaattggagcagttatcttgggacattggcactgctagctttgtttcttattattaaatctctccatgacattctccgttccatccactttaagaggaaaaaaaatcatctgatgcattcccttgcttagttcaatttcatttgctgaaaatattggattttggtttaatgtgttaaaaagattcgttgacgtttttttgcattacttgtttactttaagtaattgtgccttttgtttcattgaaggcaaggaggctagaagctcagttagatgaccaaatgagtgcttaccgtaaattgatttccatgaaatctgatggttctgagaatgatatcgagtccgatatagaaagatcgctgaagcaacttcagcaagtaaattctcaaatgcagacatgggtatcatcaggaggctcagaagtcctttctcatacattgactcgtcatatggagatattgcaagaccttacacaggttacagttgtttcctccacctcttttcagttcctagcaattgtgattagctccgtttcaataagcttcaggcaagcttcttgcaaattaccttcttcatgaggattattttacttaatcttaaaaagcactgcaggtttttctgatgctcagtggagcaaaactttacgaatacatgataacgatactttcagattcataatgttgctacaattgaatgcaggaattctatcgcctccgatcaagccttagagcaaagcaacaacatgcttctcttcttgacttgagagattttgacagagcgaagtttgatgttgaagagggtgctgactctgatcaagctctgctcaaagaacaagctgcgatcagcaggagtactgggcaggtatggctggtttactctagcactacccgcaccttatggccttgttctattgttttagtgccttttctttacaacactcctgaatcctgatcaagtaatcagtattttttccaaatgagtaccaggtaaacttcaactagacattgcatttatgataatattgacctataacagggtaacctaaccttgaaggcaatgaaataaaaccaaaatgatggattaataaaaatatacgtgaaatgattatttggtctaaaaaaatgtttccactttcaagactgcgatcttaaagctgctaaaaggttggaaaagaatgtaaattgcttaaattagtattttaatccatcgcactactacaccggcacagggataatttgggacttggaagttcagttgaacctcttttttttccctttttgcaccactgcttgatgattgcattcatattatgttttgcacacttcccccagaatagcacccacctggggtctcgaagattatggcatagtatatgggaagtgcatggaacataaatcctttttggggcctgcaaattccttgtcaccacatttccatttgtcatttgacattttttttggtcatatccttcgatctcaacacttaacatggtatttcctagacattctgcactcaactatcttagggttgcatgtcgatacttctatgtaagtttcttttcatgcaggcgtatgtgggaaaagttctattaatggttcaggatttagtttctgttcctgtttatatattctcaactagactattctaaattgaaactgtaaacattgaaatggtgttacagatggataccgtgatatcacaagctcaagctacattaggcacacttatgttgcaacgatcaacatttggtggtattactacgaagataagcaacgttagcagtcggctccctacggtataccttgataccctttttagttgttaacaaacaacccattctaacattttatgtacatctgaatctaacatcttgtatacccttttgacagattaatcaaattctttcatccatcaaaagaaagaaatcgatggacaccattattctatccctggttgcatctgtttgtgcatttcttatttttatctattggatgtcaaagtaatcttgccaaataaaggcgttatagtgttgtatgtttggaaaagtagtagtatacatgcttgccgtgtttgtacaatatcgccccatgttatatcttacctgctgttctagctacattaactatcattctgattgagctacttcaaccccatctgtacatgtgagccgtgacgaagaaaaataagtttctggtattgatttaagt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0440000, RefSeq:Os08g0440000