Difference between revisions of "Os08g0487300"
(Created page with "{{JaponicaGene|
GeneName = Os08g0487300|
Description = Zinc finger, SWIM-type domain containing protein|
Version = NM_001068635.1 GI:115477007 GeneID:4345890|
Length = 495...") |
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| Line 1: | Line 1: | ||
| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os08g0487300| | GeneName = Os08g0487300| | ||
Revision as of 20:51, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os08g0487300 |
|---|---|
| Description |
Zinc finger, SWIM-type domain containing protein |
| Version |
NM_001068635.1 GI:115477007 GeneID:4345890 |
| Length |
4953 bp |
| Definition |
Oryza sativa Japonica Group Os08g0487300, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:24190037..24194989 |
| Sequence Coding Region |
24190037..24190189,24190275..24190352,24191285..24191667,24191753..24191815,24191887..24192142 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:24190037..24194989 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:24190037..24194989 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcattcatgaactgtcgacctgttctctgcattgatgggacattcttgactggaaagtatcgggatcaaatactaacagcaataggggtagatgggaacaatcaggtattgcccttggcatttgcttttgttgagagtgagaataccgacagctggtactggttcctgaaattggttaaaacaaaagttgttggtatgaggccaaatgtgtgcctgatacatgacaggcacgctggcattctgcgagcgatagaagagttgcaatttgggagtatggaacgaggataccctggtgagtgggaagatgtacatagtaggtggtgcatgcgtcatatgagagctaatttcttcaaacatttcaagaacaaggagctcatgaacatgttcaagaggctatgcaatgagctttggaagagattagatgagttgacagccaaatgcagtgatcagcgtgcagcggctccatcgaccgccgttgctgaccctcctcaagctcttggacctctcccaacggatagtccaacattggttagaagaactggagtggagattcggaaattttctcagtggattctgcatgaaccaaaagagaaatgggccaaggcgtatgacacatgtggtgctagatatggaataatgacaacaaatttggcagaagtttacaactgggtgatgcgcagtgtccgtggactcccactagttggcatagtggagttcattttacatgggacatgcagcattttattcggaactttcatgcagaaaaagctagaggagttgtgtaaaaaggccatgaaacatcgagctctagtgcaaggtacccaacagcacaggtttgagatactatgtcaagataaggcaagcaggggtatctaccgcaagagagtgaaacaagaatgtgttctcaaagccgacggcacatgtcattgctcttgtgcaaagccgaagctgctccacaggccatgcacccatgtcattgctgccgcaacggagtgtggcataccagatgcagtatatgtgtcacagtacttcagtaagcaagcagtatatcatacatggggtggcgagatttatgggttcggcatagctagggagttcacagagactaacgatgaagtactcaatattcctgacccatcgaagctccgaggcaaggctgcaaggaggaagactcgtcgcatccgcaacgatatggacgagtcggaggctgccagggtgaagcgttgcagcaaatgcgatgaacgtgggcacacctacaagcattgtcctaaagacaaggagaaaccaagtgcggcggaggcaggactatcaggatcagcagcagatggagctcgccctacggcttgtactcttggcgaggtgcctcagtggacgtggggttccgcgttgttggcggctcagtaccgtggcctttgtgaggcttgcacgaagtcggatcccagcgcgacctttggtgggtgccctctctttctttctatctgggcagctgagaggattgcaatcggccgccctgaggtggaccagcacacgtacgaggagtcactatacgcggagcgaccggaggtcgactaccctacgatgggtactctgtggtgccgtcgtcagcgccgatgggctcacgtccaggttaggcggtcgtatcctgagttcgttatggagttcgaccgccttctgccgactgacgtcgtgtgggagccctacagtgccgcggctacccaggctcgtgcgccgttgggtctgtccacactctgcacaagggaccaggcgtattggatgactatgattccgatggtcttcgacatctgcgttgagcctcatgcccctttccgcgtgatgcggcaattcggcttccgtcagccttttccagtactgttttcgacgaccgtcccagctgatgttcaccggtactcgcgcaagggtcagcagtcagctggcaactggcccaccaagttggggacttttgttgaggactggttgctcgcaaccgaggaggtcgtggagcacgagggagagccacacaccgaggaggtcgtcgacatcaacagggtcgtcgttgacagttcaacgacgatccaacgtttaggcgcggggattccagtatccgtagaggagcacctgacgacgtacacgtggatggtggagtcgatgcgctcgattctccgagtgctcacctgtcgtgcagacgacgttgctcgggcagatgcagcaccacagcggccacccgtaccgactggtccccgtccagctgcgcacgttcctaggctgactccccctccgcatggagggtttcgtgcaccgttcagcaccccgcctttctcggctaggccttttgttgtgccccccacaggttttgcccagttcgctacgacgcaggccgcccacttctcccaggctgcagagtcagcgtctcaggcaactgtgtcgacctcgcactcagcgcagttctggcagtataccgggacttcgtcacaagcagccggcacgtcgagtcagggtccaccactggaccatgctgggacctcgtcagaccacttggtggcttccgccttgctcttcgacatcactgacttcgacttcgcttcaggctcgacagaggacgtcatcggcccctcacagctgggaggtgcaccgccggtgcagacgcaggaccaggcgcaggccactccgccaccagacactcgtgctacccgtgctgtgccaccggatcgtttcacctactcccaggaccacgttcttcgttccataaagcctacaatattgggtcgaaggttctttgtttgtccaaatattcttgacgacgatttcatggaaccaccaaggagatgtcaatacagagaatggatagacaccagaagggttctaactccacctagccgtgttgtgcagcttgaactatcagagcaatacagggttactaaagcgcagtttgagagaggagatggatcctcatataggggttag</cdnaseq> |
| Protein Sequence |
<aaseq>MAFMNCRPVLCIDGTFLTGKYRDQILTAIGVDGNNQVLPLAFAF VESENTDSWYWFLKLVKTKVVGMRPNVCLIHDRHAGILRAIEELQFGSMERGYPGEWE DVHSRWCMRHMRANFFKHFKNKELMNMFKRLCNELWKRLDELTAKCSDQRAAAPSTAV ADPPQALGPLPTDSPTLVRRTGVEIRKFSQWILHEPKEKWAKAYDTCGARYGIMTTNL AEVYNWVMRSVRGLPLVGIVEFILHGTCSILFGTFMQKKLEELCKKAMKHRALVQGTQ QHRFEILCQDKASRGIYRKRVKQECVLKADGTCHCSCAKPKLLHRPCTHVIAAATECG IPDAVYVSQYFSKQAVYHTWGGEIYGFGIAREFTETNDEVLNIPDPSKLRGKAARRKT RRIRNDMDESEAARVKRCSKCDERGHTYKHCPKDKEKPSAAEAGLSGSAADGARPTAC TLGEVPQWTWGSALLAAQYRGLCEACTKSDPSATFGGCPLFLSIWAAERIAIGRPEVD QHTYEESLYAERPEVDYPTMGTLWCRRQRRWAHVQVRRSYPEFVMEFDRLLPTDVVWE PYSAAATQARAPLGLSTLCTRDQAYWMTMIPMVFDICVEPHAPFRVMRQFGFRQPFPV LFSTTVPADVHRYSRKGQQSAGNWPTKLGTFVEDWLLATEEVVEHEGEPHTEEVVDIN RVVVDSSTTIQRLGAGIPVSVEEHLTTYTWMVESMRSILRVLTCRADDVARADAAPQR PPVPTGPRPAAHVPRLTPPPHGGFRAPFSTPPFSARPFVVPPTGFAQFATTQAAHFSQ AAESASQATVSTSHSAQFWQYTGTSSQAAGTSSQGPPLDHAGTSSDHLVASALLFDIT DFDFASGSTEDVIGPSQLGGAPPVQTQDQAQATPPPDTRATRAVPPDRFTYSQDHVLR SIKPTILGRRFFVCPNILDDDFMEPPRRCQYREWIDTRRVLTPPSRVVQLELSEQYRV TKAQFERGDGSSYRG</aaseq> |
| Gene Sequence |
<dnaseqindica>4801..4953#4638..4715#3323..3705#3175..3237#2848..3103#2495..2618#2092..2390#1749..2011#792..1396#1..740#atggcattcatgaactgtcgacctgttctctgcattgatgggacattcttgactggaaagtatcgggatcaaatactaacagcaataggggtagatgggaacaatcaggtattgcccttggcatttgcttttgttgagagtgagaataccgacagctggtactggttcctgaaattggttaaaacaaaagttgttggtatgaggccaaatgtgtgcctgatacatgacaggcacgctggcattctgcgagcgatagaagagttgcaatttgggagtatggaacgaggataccctggtgagtgggaagatgtacatagtaggtggtgcatgcgtcatatgagagctaatttcttcaaacatttcaagaacaaggagctcatgaacatgttcaagaggctatgcaatgagctttggaagagattagatgagttgacagccaaatgcagtgatcagcgtgcagcggctccatcgaccgccgttgctgaccctcctcaagctcttggacctctcccaacggatagtccaacattggttagaagaactggagtggagattcggaaattttctcagtggattctgcatgaaccaaaagagaaatgggccaaggcgtatgacacatgtggtgctagatatggaataatgacaacaaatttggcagaagtttacaactgggtgatgcgcagtgtccgtggactcccactagttggcatagtggagttcattttacatgggacatgcaggtattttagggatcggttctaggcagttcttccctctataccgaacaacagcattttattcggaactttcatgcagaaaaagctagaggagttgtgtaaaaaggccatgaaacatcgagctctagtgcaaggtacccaacagcacaggtttgagatactatgtcaagataaggcaagcaggggtatctaccgcaagagagtgaaacaagaatgtgttctcaaagccgacggcacatgtcattgctcttgtgcaaagccgaagctgctccacaggccatgcacccatgtcattgctgccgcaacggagtgtggcataccagatgcagtatatgtgtcacagtacttcagtaagcaagcagtatatcatacatggggtggcgagatttatgggttcggcatagctagggagttcacagagactaacgatgaagtactcaatattcctgacccatcgaagctccgaggcaaggctgcaaggaggaagactcgtcgcatccgcaacgatatggacgagtcggaggctgccagggtgaagcgttgcagcaaatgcgatgaacgtgggcacacctacaagcattgtcctaaagacaaggagaaaccaagtgcggcggaggcaggactatcaggatcagcagcagatggagctcgccctacgggtgaaggcactacctcaactcgaccacgtcctaggcggcgtcgtgccacgtctggctacgtggtgtagttcttgtgttctatgttggcatgtggctttgcttgtaatttgtttcgaacttatcgatgtgtttatgtttcgtcgtgtaatgtcagacttcggcatgtcatgtctttagatctcgtgatgtaacgtcagacttaggcacgtaatgtctttaggtatgctgacgtaatgtcggacttcggcatgtaatgttatgttatgttatgtaatattatcgaactctacatatatgttaaattgcacgtcatcgttatgtacccttagtaacatttgttgtatttaaatagcttgtactcttggcgaggtgcctcagtggacgtggggttccgcgttgttggcggctcagtaccgtggcctttgtgaggcttgcacgaagtcggatcccagcgcgacctttggtgggtgccctctctttctttctatctgggcagctgagaggattgcaatcggccgccctgaggtggaccagcacacgtacgaggagtcactatacgcggagcgaccggaggtcgactaccctacgatgggtactctgtggtgccgtcgtcaggtacgttgcatcgatcttctcttattgttaagttcattgctaagttcattgtacatcacatcgatcgtctcatattgcagcgccgatgggctcacgtccaggttaggcggtcgtatcctgagttcgttatggagttcgaccgccttctgccgactgacgtcgtgtgggagccctacagtgccgcggctacccaggctcgtgcgccgttgggtctgtccacactctgcacaagggaccaggcgtattggatgactatgattccgatggtcttcgacatctgcgttgagcctcatgcccctttccgcgtgatgcggcaattcggcttccgtcagccttttccagtactgttttcgacgaccgtcccagctgatgttcaccggtaagatctttcactacgctttgatttgttgcattaaaatctacctctccacaataatttgcaacatctgtcgattcacactaatatgatacattaatttgcaggtactcgcgcaagggtcagcagtcagctggcaactggcccaccaagttggggacttttgttgaggactggttgctcgcaaccgaggaggtcgtggagcacgagggagagccacacaccgaggaggtgtaccaggcctacctacgctagtaccagccacgcacccatactagggtcaccttcgctcccttggagcagcaggcccacgttgcgagcactaaagacctctacgccaggcaccgcgaccaggacttcgctcgtgctgtgagtaccctgcatcgcaccattcctttatgttttattcctttctcttcatcaaattttacgaatatttacgaacaaattaaccatgcaggtcgtcgacatcaacagggtcgtcgttgacagttcaacgacgatccaacgtttaggcgcggggattccagtatccgtagaggagcacctgacgacgtacacgtggatggtggagtcgatgcgctcgattctccgagtgctcacctgtcgtgcagacgacgttgctcgggcagatgcagcaccacagcggccacccgtaccgactggtccccgtccagctgcgcacgttcctaggctgactccccctccgcatggaggtaagtatttttaaggattttttgtacatgcctcgcacatctatgtgagccgattcatctgattgcttcagggtttcgtgcaccgttcagcaccccgcctttctcggctaggccttttgttgtgccccccacaggtacttacaaaacaacagtacttcgacaatcaatttagatgcattttatgtcttagcttacaagggtcccgttgttgatgtgtaggttttgcccagttcgctacgacgcaggccgcccacttctcccaggctgcagagtcagcgtctcaggcaactgtgtcgacctcgcactcagcgcagttctggcagtataccgggacttcgtcacaagcagccggcacgtcgagtcagggtccaccactggaccatgctgggacctcgtcagaccacttggtggcttccgccttgctcttcgacatcactgacttcgacttcgcttcaggctcgacagaggacgtcatcggcccctcacagctgggaggtgcaccgccggtgcagacgcaggaccaggcgcaggccactccgccaccagacactcgtgctacccgtgctgtgccaccggatcgtttcacctactcccaggaccacgtgcgagcataggcccggaggaccaagcgtggtcgcggcacggggcagggccagtagagcagacttctctttgtttatttgcttcacatgctagtattgtatgcttgtgtaatgaatacattgttgttatatgtgcacgatacctttcggcgtatgcacgactactttctgccgcaccgatgcaacctcctttattcgcgtgcgatacgagtatttgcccgccatttgccgcatacgaccaatgtaactttcggcgccaatcaggcgtacccaccatgccccgccacgttcacatgtcagggatatcactcgattttttgtgcctatataagtcgccttaacgagcgaggcctcacaatctttcagaactcagtcgcattcagtactctcttccctactttcttcattacaaatcctaccggctttcgtcaatggctagacgcctgggcgttgaggatccgaactggcgtagcgatccttgtgtatacctactaccaccttggtgccagcgtcctctctgcctatgcggtgatcgatgccaactaatggcttcgaggaatcctgatattcgaggaaggcgcttttttaggtgacctaactatgactgtgaggtattttattatctgcatatgcttattcattccgtatgggcaatcgttttattcttcgtaacactactctattcggtagacctgcactacggcttccgcatacatcgagtgggtcgatacagaaaatcccgttctcgaccctaaccacttgtttacaagaaggtcgctggtatttcgcatccgagtactgagcaatacttgcagagaaaagcggctttcgaacgacaatgtcgtgaacaacagtgcgactggcgggtgctaactacggcactccctccatgggaagcccgtccaagatgcaggtgtggtgatcgttgtcaggttcttcgttccataaagcctacaatattgggtcgaaggttctttgtttgtccaaatattcttgacgacgatttcatggtaagaatattttgattacatgaatccttattttctcacaacatttactaactttgctcgcttcacatctattctttccttccaggaaccaccaaggagatgtcaatacagagaatggatagacaccagaagggttctaactccacctagccgtgttgtgcagcttgaactatcagagcaatacagggttactaaagcgcagtttgagagaggagatggatcctcatataggggttag</dnaseqindica> 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| External Link(s) |
