Difference between revisions of "Os08g0517300"

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(Created page with "{{JaponicaGene| GeneName = Os08g0517300| Description = Conserved hypothetical protein| Version = NM_001068777.1 GI:115477291 GeneID:4346039| Length = 5217 bp| Definition ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os08g0517300|
 
GeneName = Os08g0517300|

Revision as of 20:52, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0517300

Description

Conserved hypothetical protein

Version

NM_001068777.1 GI:115477291 GeneID:4346039

Length

5217 bp

Definition

Oryza sativa Japonica Group Os08g0517300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:25765133..25770349

Sequence Coding Region

25765339..25765399,25766371..25766574,25766647..25766858,25766948..25766996,25767080..25767859
,25767943..25768011,25768154..25768201,25768300..25768374,25768485..25768559
,25768861..25768915,25769178..25769263,25770006..25770235

Expression

GEO Profiles:Os08g0517300

Genome Context

<gbrowseImage1> name=NC_008401:25765133..25770349 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:25765133..25770349 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgaggtcgcccgcgcctcggcttccccacctcccgcctccgcctccaccggcggcgaccgcaagcgtggccgctcctccccgtcgctcccgccgccgccgcccgggccccctccgcaggtcccgcatgggagcaagaggcaccgcagggacgaggggggcgggggcgggttcgatcggcgccgcctcgggccgggagtagggtacgacaacccggacgataggaggtatggaaatgatcatggtggtgcaggaggaagaggtggatatggggatgagagaggtcagggtagaaacttcaatcgtgcaccagattggactgattctggacgtggtggatggaatgatggcccggctaactctcgtagggaaggcctcatgtcttacaagcagttcatgcaggagcttgaagatgatgtttcgcctgatgaagctcaacacagatatgaggagtacaagtcagagtacataacaactcagaagaaagcgtactttgaccttcataagaacgacgactggctgaaaaacaagtaccatccgactaaccttgaaattgtcatggaaagaaggaatgaacttgcacgaactgctgcaaatcaattcctccaagatttgcagaatgggagtttagacattggtccaggattaacaagttctgcaacaaacaaatctgggaatagcgtagatgatacggatgctaatggaaaaaaggggaaacttggaaagagccaagatgatttatattatgctgctcctaaggctcatccagttagctctgagccccgtcgaattagaattgacgttgagctagctcaagctctcatttgtaaacttgattcagagaagggtattgagaataatgttctgtcaggtagtgatcatgacagagcagagaaagataagtcacatggttcaatgggaccaatcgtaataatacggggttcatctgctgtaaagggtcttgagggtgctgagttgctggacactcttgttacctatttgtggcgtatccatggtgtggattactatgggatgtctgagacaaatgagcccaaaggtctaaggcatgtgaaagcagattcaaggacgtttaatggggctagctcaaatgcagctgaatgggagaagaaacttgattccttctggcaagataggattcaaggccaggatccaatggaaatattgaaagcaaaggataagattgatgcagctgctagtgaagtgctggatccacatgtgagaaaaataagggatgaaaagtatggatggaaatatggctgtggagctaagggctgcacaaaacttttccatgcccctgagtttgtccagaagcatctcaaactcaaacatgcggatttggttagggaactgacttcgaaagtgagagaaaatatttattttgataactatatgagtgatcccaaggcacctggtgggatgcctatcatgcagcaacctgctccaagggagaaagtcagacagcggccaccaatagagagtcggctgagagatgagcgtggcaatcgtaggtttgatagaaatgattcaccaacccatgatggatccagtgacaaccctgatgatgcatatgattcttatggtgatccggttatgcatggcgcctttcctccggatattcctgctcctccagtgttgatgcctgtgcctggtgctggcccactaggaccatttattcctgcaccacctgaagttgctatgcgtatgatgagagatcagggtggaccaccaccttttgagccaactggtggtccacgtcctaggagaccagggaggggtggtcttccaatgggtggcccatcaccaattcttgctgctcctttaccaccccctcatatgcatgatccacgcaaaatacgaagctatcaagaccttgatgctcctgaagatgaagtgactgttatggactaccgaagcttgtag</cdnaseq>

Protein Sequence

<aaseq>MAEVARASASPPPASASTGGDRKRGRSSPSLPPPPPGPPPQVPH GSKRHRRDEGGGGGFDRRRLGPGVGYDNPDDRRYGNDHGGAGGRGGYGDERGQGRNFN RAPDWTDSGRGGWNDGPANSRREGLMSYKQFMQELEDDVSPDEAQHRYEEYKSEYITT QKKAYFDLHKNDDWLKNKYHPTNLEIVMERRNELARTAANQFLQDLQNGSLDIGPGLT SSATNKSGNSVDDTDANGKKGKLGKSQDDLYYAAPKAHPVSSEPRRIRIDVELAQALI CKLDSEKGIENNVLSGSDHDRAEKDKSHGSMGPIVIIRGSSAVKGLEGAELLDTLVTY LWRIHGVDYYGMSETNEPKGLRHVKADSRTFNGASSNAAEWEKKLDSFWQDRIQGQDP MEILKAKDKIDAAASEVLDPHVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVQKHLKLK HADLVRELTSKVRENIYFDNYMSDPKAPGGMPIMQQPAPREKVRQRPPIESRLRDERG NRRFDRNDSPTHDGSSDNPDDAYDSYGDPVMHGAFPPDIPAPPVLMPVPGAGPLGPFI PAPPEVAMRMMRDQGGPPPFEPTGGPRPRRPGRGGLPMGGPSPILAAPLPPPHMHDPR KIRSYQDLDAPEDEVTVMDYRSL</aaseq>

Gene Sequence

<dnaseqindica>4951..5011#3776..3979#3492..3703#3354..3402#2491..3270#2339..2407#2149..2196#1976..2050#1791..1865#1435..1489#1087..1172#115..344#ctcttcgcatcgtcttcctccgccttccccgaatcccccgctccccgacaccacaccgcgagatcctcctcttccagatcaagcacccaccctacctagggtttccaccccgccatggccgaggtcgcccgcgcctcggcttccccacctcccgcctccgcctccaccggcggcgaccgcaagcgtggccgctcctccccgtcgctcccgccgccgccgcccgggccccctccgcaggtcccgcatgggagcaagaggcaccgcagggacgaggggggcgggggcgggttcgatcggcgccgcctcgggccgggagtagggtacgacaacccggacgataggaggtgagagggtttgtgatgctttggtggtgtggagttgggagggtttgagttgagtttgatagctggagagaaatagaagcttccgactcattttttttttgtttggactgttagtttatatggtcgattgatgtgcgaaaaccgtggtcgttagattggtttagccatgaaaaaaaatgttgagtgcgcaatgagcagttcgaatgcgtcccatttttttcattcggaaacagtaggttttggactaggaaattaatgactgaagagatttatgtttgttgcagttttccacaatttaggattttggccagaagacgtttttcatctgccacatgggtagtctgtgaatgtcttgtagtagctcgatgtttagctcctggttgaatcccagtaagaccataagagcctgagctattgaaggcactggctgtgcttattagtcaactgaaagtgttagtaatttgggtaggataccaaaaaggatcctgaatttgactcttatatatgaagtaaacatatatggtgaagtgctacatctcattttcttgtggatttatggtacctcttcgccttttcgtatggtatttatgtgctattttgagttgggagctgctctatgtgttataacatttagcaggaattaaggaaattaatggttctggttccttgtgatatttctttctgtgattatacactattttgagcatcactgcagcttttaatttgtttggttatctcctaggtatggaaatgatcatggtggtgcaggaggaagaggtggatatggggatgagagaggtcagggtagaaacttcaatcgtgcaccaggtacacattagtttatgcaagatgtcttgtatccactagttgtctggtttaagtcctacatgagttggaatattttagatttagttcattttccttgcttatataatactatcgttcctgtctttattcggagtataaattatgtcctgtccacttgaaatatgtagataaaatcataacatactgtgtacaaaaaatatttcatgtctacttgagttacttgtagattgaagtgtctgtcaatgacatatattttgtgtagattggactgattctggacgtggtggatggaatgatggcccggctaactctcgtaggtatgtatgcaattctggattgccttaatcctgtattttgattttttttctaattttttcaatcacgaattgtacctactgagatgagacatttatgagactggcacatgctgcgatgcctatactataaaaattacaaaacttctagttggtgcactgtcaaatttatgagtaactgaactagtcatacattcaagtggtgttctttgagtatacgcatacattggattcttgtgtaagcatcacaatgcaaaatttttgcatgtggaaagcaagcaaaatgactactggtactctacagggaaggcctcatgtcttacaagcagttcatgcaggagcttgaagatgatgtttcgcctgatgaagctcaacacaggtatgctatgtttgagatgatgaattttattccgtcctacagtgtaccttcaaatatggtggctcacacaatatgtaattgccattgctgctgtttgtgctaatcattagatatgaggagtacaagtcagagtacataacaactcagaagaaagcgtactttgaccttcataagaacgacgactggtaatacctttttcttttacatcctttccatgaataatctaatgactgatttttttttcaccaagttttactctttgcacttcttgcttttgttgcaggctgaaaaacaagtaccatccgactaaccttgaaattgtcatggaaaggttagctgtttatttagtatttagtgaattttcaagattatggtggactatcttctcatattcattgtgtctccaatgtccatatcatctccactttcttgtacgtttatatgataactacattatcttttgtttgaagcagaaggaatgaacttgcacgaactgctgcaaatcaattcctccaagatttgcagaatgggagtttagacatgtgagatgctcctcccccccctctccttctctctctctatctccctctctattttacttaattttattggccactctgtgcagtggtccaggattaacaagttctgcaacaaacaaatctgggaatagcgtagatgatacggatgctaatggaaaaaaggggaaacttggaaagagccaagatgatttatattatgctgctcctaaggctcatccagttagctctgagccccgtcgaattagaattgacgttgagctagctcaagctctcatttgtaaacttgattcagagaagggtattgagaataatgttctgtcaggtagtgatcatgacagagcagagaaagataagtcacatggttcaatgggaccaatcgtaataatacggggttcatctgctgtaaagggtcttgagggtgctgagttgctggacactcttgttacctatttgtggcgtatccatggtgtggattactatgggatgtctgagacaaatgagcccaaaggtctaaggcatgtgaaagcagattcaaggacgtttaatggggctagctcaaatgcagctgaatgggagaagaaacttgattccttctggcaagataggattcaaggccaggatccaatggaaatattgaaagcaaaggataagattgatgcagctgctagtgaagtgctggatccacatgtgagaaaaataagggatgaaaagtatggatggaaatatggctgtggagctaagggctgcacaaaacttttccatgcccctgagtttgtccagaagcatctcaaactcaaacatgcggatttggttagggaactgacttcgaaagtgagagaaaatatttattttgataactatatgaggtatgttttcttcattgtcattcttttggctgaactaatttttaacattccaaagaagattatgctgtacatattgcatgcagtgatcccaaggcacctggtgggatgcctatcatgcagcaacctgctccagtaagcctcactacctagtttttagtcagttgcaaattggtgactgtttaagttccttactgtcttgtttgtattggccaatttttcagagggagaaagtcagacagcggccaccaatagagagtcggctgagagatgagcgtggcaatcgtaggtttgatagaaatgattcaccaacccatgatggatccagtgacaaccctgatgatgcatatgattcttatggtgatccggttatgcatggcgcctttcctccggatattcctgctcctccagtgttgatgcctgtgcctggtgctgggtaagtctgcaacttgtgcttagttttcacaataatacacttattgttgattcgttgtcattttcatctcagcccactaggaccatttattcctgcaccacctgaagttgctatgcgtatgatgagagatcagggtggaccaccaccttttgagccaactggtggtccacgtcctaggagaccagggaggggtggtcttccaatgggtggcccatcaccaattcttgctgctcctttaccaccccctcatatgcatgatccacgcaaaatacgaaggttagtacttacatgtttgtctcctttcccttgtgttccctattctgtcctcaccatgcgacataagcaatttatttcaatatcctgaaacatcgttaacaaaataagtatgctgatagtgaaaaaactgaacactgattatttctctggagttctgctggacatcctttgtcgtaatttaccgtgatatgcaaatatttctttagagaaaaggctgcaatgacctggcttgtattgaaagccaaaaggttgtctgctggggattccagctttacatgtgtatcacaggaaacctaaactgattacaccctgatcaagtaggtatcgcccagagccaagcaaaaactgaggtcttaaacaaccagactacagtactagggatataacaactcccaaaaacagaatcccagactactgtagcgaagctggcacggcatttgaccatgatatgcaaatatctcaagttcactacgaaatttggatgatccgcttgcaaatttgagctcattagcagaacacgcgattgatttggatttcatatacctggaacaaacatggccatgtcacaattcacaaaggaccttacatacagtttgaagcatggtaaaacatgctcctggtattgtttgtagagtctcttggctaggaaatttttaaaaaacttattaggataggatgtcaagttggtgtttccaatatagtctgatttgtgcttgctaaagcatttgcaagatgtacaatacgttatcatggagattgtttgtcagatttaaggtattgctgttccctgctgcatgtaggtttgcgaactttatgttctaaccaaaatttgtcccctatacatgtctaccaagttgtatttgaagttagcactggcacatcatatctgaacttcagaatactcatttgctgtttattttagatacttattttttgctacaatttttcacatgtgttaaccttgcttccagctatcaagaccttgatgctcctgaagatgaagtgactgttatggactaccgaagcttgtagaggaattggagacacgatccttttttgtatctgggaaactgtaggtaatattacagaccgcaacaagacggcattcatttctagatttttttgtgaacgcaaacaggtaggactttgaggttcggagctctgttactgtctgtaaaatggatcacaggaaaacctgggacaaggagcatattctcattcaccaatcaccactcacc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0517300, RefSeq:Os08g0517300