Difference between revisions of "Os08g0519600"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os08g0519600| Description = Protein of unknown function DUF1666 family protein| Version = NM_001068795.1 GI:115477327 GeneID:4346057| Length = 5...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os08g0519600|
 
GeneName = Os08g0519600|

Revision as of 20:52, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0519600

Description

Protein of unknown function DUF1666 family protein

Version

NM_001068795.1 GI:115477327 GeneID:4346057

Length

5304 bp

Definition

Oryza sativa Japonica Group Os08g0519600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:25905766..25911069

Sequence Coding Region

25906267..25906759,25907381..25907788,25909929..25910125,25910659..25910904

Expression

GEO Profiles:Os08g0519600

Genome Context

<gbrowseImage1> name=NC_008401:25905766..25911069 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:25905766..25911069 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatttcttcaagatcaagaagttggggaaggcccggaagagcggcgggggcgggggagaggttgtagaatcagaggaggaaaccaaggctgggaacaatgcagcttccgatgagcagaagggcaagatcttggaggatgatcctgcggcggcagcagccggtgcgggtatggatgcagatgcaggcaatggggccgtggaagggcaggaggaggatgatgacgatgatgatttcatcaccaatgaggtgaagcgtaggctcaaggagctgaggaagaacagcttcatggtgctcatccctgaggaggagtgtgctgaggtggaggaggatggggaagaggaggaggaggaagggagtagttccagggagtggatggagtccgacgtcggcgacgggttcccgctatgcgggttcgattcgctctatgagaagtattgtgagaggatggcggtgttcgataagatgatcacgcagcttctcaaggatccagggtccttcaacatctcaaaaaagtcgcctagatcagcatccaaattggcatcaaccctgcgcaacctctctttcaaaaggagggatgacctccaggaggactgcgaacatcttcagcaacagcagagcgaggatgatccctaccaaacacttgagacagcatatgttgggcatgtttctttaagttgggaggctcttcattgtatgtatgtgcacctgagtctgatactcgcagctcaacctgataatcccaccacctacagctgtgctgctcaagcattccagcagttccaggttctattgcagagatttgttgagaatgagccatttgagcaaggttcacgggttgagatatatgcacggtctcggagttccttgtcgaagttacttcaggtccccacttttcaagttgcagatgggaaatataatgctgaagatcaagtggaaccttcaatttttgcatctgacctcatcaaattattagaggagtctatcatgactttccgtcttttcctgaaaaaggacaagaaaaagaatagtgccctcatgagtgttcatagtcatactggaagctcgattcaacaagttcaatcctctcttgataagaaggaagtgaaagtgaaggagctattcaagaagaagaaaggatggaagagcaagacctggccagccacaatggaggaagttcagctgctttttgccttaatcgacatcaaggttgtgtcaagggtcctaaggatggcgaagctcagcaaggagcagctcctgtggtgtgaggagaagatgagcaagctggatctctccgacaacaagctgcggcgcgatggatccccaatcctgttcccctgttga</cdnaseq>

Protein Sequence

<aaseq>MDFFKIKKLGKARKSGGGGGEVVESEEETKAGNNAASDEQKGKI LEDDPAAAAAGAGMDADAGNGAVEGQEEDDDDDDFITNEVKRRLKELRKNSFMVLIPE EECAEVEEDGEEEEEEGSSSREWMESDVGDGFPLCGFDSLYEKYCERMAVFDKMITQL LKDPGSFNISKKSPRSASKLASTLRNLSFKRRDDLQEDCEHLQQQQSEDDPYQTLETA YVGHVSLSWEALHCMYVHLSLILAAQPDNPTTYSCAAQAFQQFQVLLQRFVENEPFEQ GSRVEIYARSRSSLSKLLQVPTFQVADGKYNAEDQVEPSIFASDLIKLLEESIMTFRL FLKKDKKKNSALMSVHSHTGSSIQQVQSSLDKKEVKVKELFKKKKGWKSKTWPATMEE VQLLFALIDIKVVSRVLRMAKLSKEQLLWCEEKMSKLDLSDNKLRRDGSPILFPC</aaseq>

Gene Sequence

<dnaseqindica>502..994#1616..2023#4164..4360#4894..5139#accaccactgccactgtagcgtcatgctgtaacgctcgcttaaacccaagcacgcagcacacgctctccattccattcccctcccgattgatctccgcctcgatcccccccgacgccgccatatggagctcaccgccgccgcgtgatgagctgccccggtcgcgattgctgggctccgctggtgattcgtcggttggatcttggaggttttttatccccattattcaagctggttactcgggtgggtggtttcttgaggctggtgcgtggttgcatttcacggatttatgagttcttttttttatttttatttttattttgttattagtttggggcttgttctttcgttgtttgcttcacttggtgatttgattcttgtggtgcttgcagggaagacaaaaaggggagtgaggttttggattaaggaaaggggaaggggatcttctttagcatcgatcggatcctctctgttgggatttcgaagcttctgcgcttccacggatggatttcttcaagatcaagaagttggggaaggcccggaagagcggcgggggcgggggagaggttgtagaatcagaggaggaaaccaaggctgggaacaatgcagcttccgatgagcagaagggcaagatcttggaggatgatcctgcggcggcagcagccggtgcgggtatggatgcagatgcaggcaatggggccgtggaagggcaggaggaggatgatgacgatgatgatttcatcaccaatgaggtgaagcgtaggctcaaggagctgaggaagaacagcttcatggtgctcatccctgaggaggagtgtgctgaggtggaggaggatggggaagaggaggaggaggaagggagtagttccagggagtggatggagtccgacgtcggcgacgggttcccgctatgcgggttcgattcgctctatgagaagtattgtgagaggatggcggtgttcgataagatgatcacgcagcttctcaaggatccaggtgaaatatttagcccgcggagtcgttctcgtatggttgattgtacattttgcatgtcttagttgaatgcgaaacctaatgtatattcatgttaaccacttggtcttagataacccctctgttattgccgttcatttgtttgtgggacattaattggccatatgattgcacgtgcgtgcatggtatcaattttagtacatatatgatacgatagattatataaatctaaatgactgttgaatatcatatactttgccattccttatgtgatgagtacataactaccatatgagtgtcatatgcttcatatggagattcttatgctaattgatggtatcattttgtatgataataaattgtcgtcttccgtaggtagttctattctgttaaccaatttcagcattttactggccaacagttcctgagtaatgtttcctttatgcatacatcagtgcctattaactttttgtcggacttgagggttccgtcttttccttgtgtagcaaggctacacttatgcatacacatttgcttacctaatcagacagtttcttttgccgttctattctataaagtctcaacaatttatcctttttaatgattggtaaacaaacttcctagggtccttcaacatctcaaaaaagtcgcctagatcagcatccaaattggcatcaaccctgcgcaacctctctttcaaaaggagggatgacctccaggaggactgcgaacatcttcagcaacagcagagcgaggatgatccctaccaaacacttgagacagcatatgttgggcatgtttctttaagttgggaggctcttcattgtatgtatgtgcacctgagtctgatactcgcagctcaacctgataatcccaccacctacagctgtgctgctcaagcattccagcagttccaggttctattgcagagatttgttgagaatgagccatttgagcaaggttcacgggttgagatatatgcacggtctcggagttccttgtcgaagttacttcaggtccccacttttcaaggtatgatttttaggtttgcaatctttaaacggacataacccatcatttgacaatcgaatatctttccgtgagcggtacaattcacccttaatcctcctggcagcttattgacttttttattttctagaaaataattatatcattgggttgagtttctgtgtagcatagtaattcatcgattttattacctgatgtttcttttaatcaaataatttctgtgcacattagtttcttttacaaaagccattacatttgtttggttgaaattttgtgtcttattgaacttaacttctgatagattgcccagtgacaaagccagcaagatgtacgtaccgttttggcatatgaagtaaaaagctctagcaattataggtaggtacattggcatactctcagaaaaaaaaaaggatacatcagctgtgcacactaatgcctcatctggcaaggcccaaatcttagtttaaattcctggtccatctctagggatgggctgggatttggacattgccaaacaaggcctaagacaccatggtttaccattggtaacatgtccagaatgacctactatgcagttctgtaagtaccagttactacagctaggacctaagcacattgaagatatcgtgctgtaggatggagatttctgacaatttttgcatcttcttcctcctacctgtaggttactcctgtgcaacacaaagtaatgcataccctttttttttgtgattgggttgtcacgtgcttgatatattgatctttattgttgctcgtacatctttcatcaggtcaacttaatctatttgcttatccaactaatgacattgtttagtacatgttttcacaatctgttaatctggtgctgctcttgggtaggtccttggtgataagctatggtactaagatgcatttaaaaatcaaatgtgttgacactaatgttggagagttataagtgtatgactggggtagattcagttgagagctttcatccttagatgtttaactcaagatgagtttaggatctagaacatactatgcatttgtccgtacagtctatatctcagttactagctgttgtgccagatgatagtttcttttttaaatcacacttatgtttaggatctaaaactttcagctactgattaacaacttgcgatttatggcaatgtctcccagaagtacaatcaaattggtaatgacttaatataattatgatggaaatgtttaagggccattagcccattataggagatatatagatcttacatcatgtttatccacatcagcatgtttgtcgtattaaacgacatgcagatactgccctggacgtagattattttaactttttaagtgtgactatctttggctttggcattgaatagcctagacattgcacatgctataagccattttgatctgctgtacattatggcactattaatggccagtattgcaccaccattggatcttttttcctttcaattctgtttcacatttcgtctgcgaccaagaaagatattaacagcagtcagatttataacatcattgagtaattatgtgaatatggcaacacctgaacactatatgtatccaagaattaagagccacatgtttcgtactgttgatttctgcaacatgtgctcaacctgtgactgaaatggtgtacacaagctttaagagcattctttgcaaatttaagatgtgtcagaatgccatgcccataaacttcctcatttattccataggattttgaaagatttctatcagtctagactcacagcaggacttggtacaggtataaattgtattacctagatgcaagctaatcggttggttgaaccaaatcttgtttaatgtgatgcttagtacaaaaaaatccctgaactccccaaaagatttccttgcatcagattttactttggtctaccagcaaggcagtaagttctgaatgcaataaacactgttgtctcttctgtggggccatggcttcacttttgcttttgttacaggattttttttttatgtttttgcattcatttgagaactgggttctttaaacacaatttttacacgactctgttaattaatgccattcttgtttttaattaatatatttcttttcatttttgtattctctatacagttgcagatgggaaatataatgctgaagatcaagtggaaccttcaatttttgcatctgacctcatcaaattattagaggagtctatcatgactttccgtcttttcctgaaaaaggacaagaaaaagaatagtgccctcatgagtgttcatagtcatactggaagctcgattcaacaagttcaatcctctcttgataaggtaatatcttattcttatatgtggctgattgactaacaaaacctcgagctccttggtaggtttctttagttcatatctgctgggtgctggttattcagtgtctcacggggtagttttatatttgatgaaacggggtagttttatattcattgttgctaacttttattggcttggttttcatatgatctctttctgaaatgtgctagtagtataatcactttttcctcaaatagatctgatgttcgtctcatatgaaacaaaagctctgaaagttatttgcatggatatggtatttgtacttgcacatggtggttgagtctgcatgccttcaagatttctttacagcatatgttaccaaacgtggcacgtcgagaaataaatgccatattactaatgcagcatctattcttagcaacgtgagcccaattagctgattcgattgttcacacgctctttcagtctcagatccgtgtatatctacagtttgtctttatacgactctttgtttctaatggatccctccaaacctgcagaaggaagtgaaagtgaaggagctattcaagaagaagaaaggatggaagagcaagacctggccagccacaatggaggaagttcagctgctttttgccttaatcgacatcaaggttgtgtcaagggtcctaaggatggcgaagctcagcaaggagcagctcctgtggtgtgaggagaagatgagcaagctggatctctccgacaacaagctgcggcgcgatggatccccaatcctgttcccctgttgacccatcgagtgcctgaggcaccgcaaaatgtggcatctgctacactttgaatactttatagcttagctgctgtatgagctgataccaccctattatatgtaaatgcctttaggtttaaatgctcatactaaaacgatacctaagaagagttgctgctagatcccc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0519600, RefSeq:Os08g0519600