Difference between revisions of "Os08g0520500"
(Created page with "{{JaponicaGene|
GeneName = Os08g0520500|
Description = Similar to Auxin response factor 5 (Transcription factor MONOPTEROS) (Auxin- responsive protein IAA24)|
Version = NM_...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os08g0520500| | GeneName = Os08g0520500| | ||
Revision as of 20:53, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os08g0520500 |
|---|---|
| Description |
Similar to Auxin response factor 5 (Transcription factor MONOPTEROS) (Auxin- responsive protein IAA24) |
| Version |
NM_001068803.1 GI:115477343 GeneID:4346065 |
| Length |
6203 bp |
| Definition |
Oryza sativa Japonica Group Os08g0520500, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:25959296..25965498 |
| Sequence Coding Region |
25959296..25959449,25959937..25960127,25960300..25962143,25962299..25962437,25962506..25962581 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:25959296..25965498 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:25959296..25965498 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ggggcgaccaaggtgaaccaggagctgtggtacgcgtgcgcggggccgctcgtctcgctgccgccgcaggggagcctcatcgtctacttcccccagggtcacagcgagcaggttgcagcatctatgcgaaaggacgcagatgcgcaaattccaagctatccaaatcttccatcaaagctgatatgcatcctccacagtgtcaccatgcttgctgatcctgacacagatgaggtttatgctcgaatgactctccagccagttagcaattgtgacaaggagacattgctagcatcagagcttgcgctgaagcaaaccaggccacaaacagaattcttttgcaaaacactgaccgccagtgatacaagcactcatggaggtttctctgtgccacgccgtgccgctgagaggatttttcctcgtcttgacttctccatgcagcctcctgcccaggaactgcaggcccgggatttgcatgataatgtttggacatttcgtcatatataccggggtcagcctaaaaggcatttactgactacgggctggagcctatttgtcagtggaaagagattacttgctggtgattcagtcttgtttattagggatgcaaaacagcagctcctcttggggatcagacgagcaaataggcaacctacgaacctctcatcatctgtcttatctagtgatagtatgcatattggaattcttgctgcagcagcccatgctgcagcgaataacagccaatttacaatatattataacccaagggccagtacttccgaatttgtgattccttttgccaaataccagaaggcagtgtatggtaaccaattatctcttggcatgcggttcagaatgatgtttgaaactgaagagtcaggaacaagaaggtacatgggtacaataactggtataagtgatctggatccagtaaggtggaaaacatctcattggcgcaatattcaggttgcatgggatgaagcggcaccaactgagagacgcaccagggtttccctctgggagatagagcctatcattgctccattcttcatctacccctcaccattattcaccgcaaaacgtccaaggctacctgggatgacagatgacgagactgaaatggacggtcttctcaagagggccatgccatgggttggtgaggagatttgcaagaaagatctgaatattcagaacagtgtagtgcctggtctaaatctagctcagtggatgaacatgcagcacagctcctcgcttcctggcacggttgtgcaaccagagttactaaactcattaagtggaaaacctgtacaaaatttggctgcagctgatttatcaaggcaaatcagttttcacccgcagttcttgcaacaaaacaacatccagttcaacactgcgttggtacctcaacaaaaccaacagacagaacaattagcgaaagttatccctacaccaaaccaattgggaagtgttataataccgcagaaggtggttcaggattgcaactctgaacaaaggcagcatgtggttactcaaccagtgcaaggcagccagccaaacataaacattccacagcctcagcttgttgttcaggctcagcttcagcaaccgcaagtcattctccaggcgcaactgcagcaacctcaagttgttgtccaggcccaactccagcaaacgcaaccttcggtccaaagtcacactgtcttacaaggaggtcttcaacaaatccagcttctccagcagcaacagccacatgtgcagcaccagcagataccgcaacagttacatcatcagcagcagcaaacacaacagttgcaacctgtccagcaggttcagcagtcagtacaggaacatcagcaaataaagatacaacctgttcatgtttccatggatgcaagtatgaatacgcaggtggcagatcatcaaatgaaactacaactactcaaggctttacagccacagcagcctctgatctcagagcagcagaagatgcttttggatttgcagcagcaagtgataaattcacagtcagctcctcagcagtgtgtacaggtaacaaaccaagctattagtttacataacagtaacactattcaatacccgacacagcaaaaggttcagtctcaccaagttcaagacttaactgggaatgtcattcctaattcaaaatcagacatcgctacttccatgggtgctagttctttgcatgtagctggtggacgccaattattgaagacagatgatgttccgtctacttcaacatcaccatccactaacagcaatcctgttcttctgcaatccatcccaagtagctccaagaaccaaagtttaactacagcaggaaagacatctcaatcatctgttgtgttgggtcctacgatcgaacaggacacaaagccatatcaaaatgtaaagcaaacagttatgattcccaagacgacagaacaaaggccagctactggacaagactgcataaataacaatcctcaaatggattacttggacacatcctcttcagctacttcggtttgcctttcccaggctgatggatcattgcaacaaaactttccaccttcatccttccaccagcatcacttgctaaaagacacagttccagatagcgagtttgaggttacagatccaagaaataaccttctatttggggtgaatattgatggtcaactgggtttaccacttaatgcagacctgcttgcgaatgacattggaaccgataaatacatggatcagttgccaggaaatggcatttctaacttcatttcatcaaaggattctcaacaagagttatcatcttcaatgatttcacattcatttggagttgctgatatggcattcaattctatagattctgcaatcaatgataccccattcttaaatagaaattcccggtctgcagcaggtcctgcacatcaacggatgagaacctacaccaaggtacacaagcgtggtgcggtgggaagatcaattgacatcaatcgatattctggatatgatgagctgaaacatgacgttgctcggatgtttggtattgaggggcagcttggtgatcaaaatagagttggctggaagctagtatatgaagatcacgagaaggatgttctactagttggtgatgatccatgggaggactttgtgaaatgtgtacgatgtatcaggattctttctccacaggaagaaatgcagatgagattagtcggcgactttggagacagctttctacccaaccaagcttgcagcagctctgatgggggtcatccctggaggataaccggcgactag</cdnaseq> |
| Protein Sequence |
<aaseq>GATKVNQELWYACAGPLVSLPPQGSLIVYFPQGHSEQVAASMRK DADAQIPSYPNLPSKLICILHSVTMLADPDTDEVYARMTLQPVSNCDKETLLASELAL KQTRPQTEFFCKTLTASDTSTHGGFSVPRRAAERIFPRLDFSMQPPAQELQARDLHDN VWTFRHIYRGQPKRHLLTTGWSLFVSGKRLLAGDSVLFIRDAKQQLLLGIRRANRQPT NLSSSVLSSDSMHIGILAAAAHAAANNSQFTIYYNPRASTSEFVIPFAKYQKAVYGNQ LSLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKTSHWRNIQVAWDEAAPTERRT RVSLWEIEPIIAPFFIYPSPLFTAKRPRLPGMTDDETEMDGLLKRAMPWVGEEICKKD LNIQNSVVPGLNLAQWMNMQHSSSLPGTVVQPELLNSLSGKPVQNLAAADLSRQISFH PQFLQQNNIQFNTALVPQQNQQTEQLAKVIPTPNQLGSVIIPQKVVQDCNSEQRQHVV TQPVQGSQPNINIPQPQLVVQAQLQQPQVILQAQLQQPQVVVQAQLQQTQPSVQSHTV LQGGLQQIQLLQQQQPHVQHQQIPQQLHHQQQQTQQLQPVQQVQQSVQEHQQIKIQPV HVSMDASMNTQVADHQMKLQLLKALQPQQPLISEQQKMLLDLQQQVINSQSAPQQCVQ VTNQAISLHNSNTIQYPTQQKVQSHQVQDLTGNVIPNSKSDIATSMGASSLHVAGGRQ LLKTDDVPSTSTSPSTNSNPVLLQSIPSSSKNQSLTTAGKTSQSSVVLGPTIEQDTKP YQNVKQTVMIPKTTEQRPATGQDCINNNPQMDYLDTSSSATSVCLSQADGSLQQNFPP SSFHQHHLLKDTVPDSEFEVTDPRNNLLFGVNIDGQLGLPLNADLLANDIGTDKYMDQ LPGNGISNFISSKDSQQELSSSMISHSFGVADMAFNSIDSAINDTPFLNRNSRSAAGP AHQRMRTYTKVHKRGAVGRSIDINRYSGYDELKHDVARMFGIEGQLGDQNRVGWKLVY EDHEKDVLLVGDDPWEDFVKCVRCIRILSPQEEMQMRLVGDFGDSFLPNQACSSSDGG HPWRITGD</aaseq> |
| Gene Sequence |
<dnaseqindica>6050..6203#5372..5562#3356..5199#3062..3200#2918..2993#2464..2586#2219..2383#2017..2107#1720..1804#1477..1632#1324..1380#1106..1204#1..111#ggggcgaccaaggtgaaccaggagctgtggtacgcgtgcgcggggccgctcgtctcgctgccgccgcaggggagcctcatcgtctacttcccccagggtcacagcgagcaggtacggccgccgccgccgccgccgccgagctctctgcttccgacgacgacgacttgtgaagttgttgaagtcgtctttgatcaaagctgctgctgctgattgctttgctttgttcttcttttttcccccatttcggatgaagggagatttctccctttctttggttcttgttgttttttcattgtggttttcgtgaatttttcgttttcatctttcttctcttagttgtcgcgtcatgtccgcgtgcggcggagaatttttttctctctctctttgcggttgtgtggtttggttgattggttccgtgtccggtgtcaattggttcttgagcgtttgatcttggccatatatccaaatggtttctttccctttgttctcgagaaatagggaaaaaaagattccggttttctcggtgttcttgttctcataagaggaagatttgggaatcgatttttttggtcataaaggaagaggtttcagagaggaattaattcactgtctaattgctcgtgttgtttacttccctttgcttttgttctttgtgagattaagtcgtcgcgtcatggaggtttggtgccatttgatgcaatgctggaggagcatggagttgggcatcctcccaatctgtcttccttttctgatgctcctttacatgttgtttaatcttatctgcagataactttaatctttttgcaactttcaactacgaacatacaacttttgttaatcttctttcagttcttagcaaattcagttatacggcactgtaatttgaatcaacccaaacgaaaagtgctcatgttacttggttgcttctgttttaccatggagtttgatatagaaaacatgtgtgtttctgtacacaagttctatgatgagagttaacaaaagctttgagagttactagcacaccgtttgtaaatgtgcaagttttgtgcaagtggttttggggtttcatggagaacaattctcattcctggatacccgatttcaggttgcagcatctatgcgaaaggacgcagatgcgcaaattccaagctatccaaatcttccatcaaagctgatatgcatcctccacagtgtcaccatgcttgtaatctctgccactttgagcatcagtaaacagaaaaagagctccacgctttattagtgctctattatgccaataatttgaacttctgtactgacacatttcttgacaaaacatgacaggctgatcctgacacagatgaggtttatgctcgaatgactctccagccagttagcaatgtaggttgcaatttcccaaattcagttagatcttctggattatgtgatgtagcagtaccgacatgattttggaattgggattattaggtgacccagtgtgacaaggagacattgctagcatcagagcttgcgctgaagcaaaccaggccacaaacagaattcttttgcaaaacactgaccgccagtgatacaagcactcatggaggtttctctgtgccacgccgtgccgctgagaggatttttcctcgtcttgtgagcatactttaaccttatggaaaacaaagtgttgattctttcttggtttcttctactaacttatgcgcactgtattatgtttaggacttctccatgcagcctcctgcccaggaactgcaggcccgggatttgcatgataatgtttggacatttcgtcatatataccggggtacagtagaaaaatactaatattccgttgttccctttgatgcatgataaaagctaatgcaacttagtaaaggccttactcttgtaaacgaaacccgtattcaactgccgtatgtcagctttggcctttggttactaaaaggttcaggaaactctggtgttacttcatgctttaatgtctcaaagtttatgagttctctttctcttcaccaggtcagcctaaaaggcatttactgactacgggctggagcctatttgtcagtggaaagagattacttgctggtgattcagtcttgtttattaggtacactgattatgccaataaactgttttttctgcctcgctatcgcttgaaaatgttgctgtaacaaatcaatcttgagggagtactaaactttcttcattccgaccatagggatgcaaaacagcagctcctcttggggatcagacgagcaaataggcaacctacgaacctctcatcatctgtcttatctagtgatagtatgcatattggaattcttgctgcagcagcccatgctgcagcgaataacagccaatttacaatatattataacccaaggtaaacatctttggctaggtttaacgtatgaagagatgatatgttattagttttgtttgaacttttttttgtttattcagggccagtacttccgaatttgtgattccttttgccaaataccagaaggcagtgtatggtaaccaattatctcttggcatgcggttcagaatgatgtttgaaactgaagagtcaggaacaagaaggtatagtttctgaactttatcttatttgtgtaacatatacttgttctcattacttcaaattccttttagttgaaaattttttatcctaaacccccctctaaggggtggatatcgagctaccttgactcccacagggaccctgctacagactggacctaaaaagatccttggtgtgtgttgtgcacacttaggatattttgggagcatcatttttctgcattgagtcacattcagctctctgtgttgactgtgttcatgttcatgcacttgtgaatgtgtgatgttttataagattcttttctgaatcgtatttgtgacatcttccttgcaggtacatgggtacaataactggtataagtgatctggatccagtaaggtggaaaacatctcattggcgcaatattcaggtttggtctgattccttacaaagctatatctcctttgtttttgctggaataagtagaactatatgcaggttgcatgggatgaagcggcaccaactgagagacgcaccagggtttccctctgggagatagagcctatcattgctccattcttcatctacccctcaccattattcaccgcaaaacgtccaaggctacctgggatgacaggtaaacagttactgatctgataaaaggtcactctatggatgattagtactcatatcagactatgattattgtgtaaccaaagttttcgactgaatatcagttctaacagaaaattatgatttcattatcttataataatttaatcacatctgtagatgacgagactgaaatggacggtcttctcaagagggccatgccatgggttggtgaggagatttgcaagaaagatctgaatattcagaacagtgtagtgcctggtctaaatctagctcagtggatgaacatgcagcacagctcctcgcttcctggcacggttgtgcaaccagagttactaaactcattaagtggaaaacctgtacaaaatttggctgcagctgatttatcaaggcaaatcagttttcacccgcagttcttgcaacaaaacaacatccagttcaacactgcgttggtacctcaacaaaaccaacagacagaacaattagcgaaagttatccctacaccaaaccaattgggaagtgttataataccgcagaaggtggttcaggattgcaactctgaacaaaggcagcatgtggttactcaaccagtgcaaggcagccagccaaacataaacattccacagcctcagcttgttgttcaggctcagcttcagcaaccgcaagtcattctccaggcgcaactgcagcaacctcaagttgttgtccaggcccaactccagcaaacgcaaccttcggtccaaagtcacactgtcttacaaggaggtcttcaacaaatccagcttctccagcagcaacagccacatgtgcagcaccagcagataccgcaacagttacatcatcagcagcagcaaacacaacagttgcaacctgtccagcaggttcagcagtcagtacaggaacatcagcaaataaagatacaacctgttcatgtttccatggatgcaagtatgaatacgcaggtggcagatcatcaaatgaaactacaactactcaaggctttacagccacagcagcctctgatctcagagcagcagaagatgcttttggatttgcagcagcaagtgataaattcacagtcagctcctcagcagtgtgtacaggtaacaaaccaagctattagtttacataacagtaacactattcaatacccgacacagcaaaaggttcagtctcaccaagttcaagacttaactgggaatgtcattcctaattcaaaatcagacatcgctacttccatgggtgctagttctttgcatgtagctggtggacgccaattattgaagacagatgatgttccgtctacttcaacatcaccatccactaacagcaatcctgttcttctgcaatccatcccaagtagctccaagaaccaaagtttaactacagcaggaaagacatctcaatcatctgttgtgttgggtcctacgatcgaacaggacacaaagccatatcaaaatgtaaagcaaacagttatgattcccaagacgacagaacaaaggccagctactggacaagactgcataaataacaatcctcaaatggattacttggacacatcctcttcagctacttcggtttgcctttcccaggctgatggatcattgcaacaaaactttccaccttcatccttccaccagcatcacttgctaaaagacacagttccagatagcgagtttgaggttacagatccaagaaataaccttctatttggggtgaatattgatggtcaactgggtttaccacttaatgcagacctgcttgcgaatgacattggaaccgataaatacatggatcagttgccaggaaatggcatttctaacttcatttcatcaaaggattctcaacaagagttatcatcttcaatgatttcacattcatttggagttgctgatatggcattcaattctatagattctgcaatcaatgataccccattcttaaatagaaattcccggtctgcagcaggtcctgcacatcaacggatgagaacctacaccaaggtttgttatctagcttagcctcaacttgttactttacaccatcttttttagaaaaaaatttcgagttaagttacaatcttaggatgactcttaactaagattcatgaaataattgcacatgttgatgattattgcagtggacacctgtgctgaccaaaataattatctacaggtacacaagcgtggtgcggtgggaagatcaattgacatcaatcgatattctggatatgatgagctgaaacatgacgttgctcggatgtttggtattgaggggcagcttggtgatcaaaatagagttggctggaagctagtatatgaagatcacgagaaggatgttctactagttggtgatgatccatgggagtaagtcaaatcccataaacttatttttcatctgcacatacaaaactaacaataatatctttctggaggcgtggatctttttttttaccgaagataaacccatggatggggttagctgatttgagtgaacatgatcttggagcaacttcatatagattctggatttattgtttgtgagcttagtttcactaacacgcaaagatctgtacatccctgcttgttagtttcacatgccatagaatgttttctaactccagctgaatatttactttacctgttaaaacatgtagagagactctaaaagcaactctgtgttacgtaaaaccaatcaagcatattttctgcagtgatctcaccacttacctgattgggaaatataacgaggctccatttttttcaactgatcatacttattcacctatcaaagtatagctatttctaattgtatcacggtgataactaagaaccgatggctttgcatgtgcagggactttgtgaaatgtgtacgatgtatcaggattctttctccacaggaagaaatgcagatgagattagtcggcgactttggagacagctttctacccaaccaagcttgcagcagctctgatgggggtcatccctggaggataaccggcgactag</dnaseqindica> |
| External Link(s) |
