Difference between revisions of "Os08g0529100"

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(Created page with "{{JaponicaGene| GeneName = Os08g0529100| Description = Similar to Proteasome subunit beta type 1 (EC 3.4.25.1) (20S proteasome alpha subunit F) (20S proteasome subunit beta-...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os08g0529100|
 
GeneName = Os08g0529100|

Revision as of 20:53, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0529100

Description

Similar to Proteasome subunit beta type 1 (EC 3.4.25.1) (20S proteasome alpha subunit F) (20S proteasome subunit beta-6)

Version

NM_001068853.1 GI:115477444 GeneID:4346117

Length

2186 bp

Definition

Oryza sativa Japonica Group Os08g0529100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:26430358..26432543

Sequence Coding Region

26430553..26430695,26431272..26431353,26431569..26431698,26431796..26431938,26432074..26432160
,26432261..26432335

Expression

GEO Profiles:Os08g0529100

Genome Context

<gbrowseImage1> name=NC_008401:26430358..26432543 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:26430358..26432543 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaggttcgaggtgtacgagaacaacggcggcacgtgcgtggccgtcgccggcgccgactactgcgtggtcgccgccgacacgcgcctctccgtcggatacagcatcctcagccgcgacagctccaagatcgcccacctagcggataaatgtgttttggcctcatctggatttcaaggtgatgttaaagctttgcagaggaaccttactgccaaggaattgctttatgaacacaaccataacaagaaaatgagctgccctgcgatggcgcaattactgtccaacacgctctactacaaaaggttcttcccatactatgccttcaatgtgttgggtggacttgacagcgaaggtaaaggatgtgtcttcacatatgatgctgttgggtcttatgaaaggacaggttatagtgctcaggggacaggtgcagctttgatgatgcctgttctggacaatcagctaaaatctcctagcccattactacttccagctcgggatgcagtgacaccattatctcaatcagatgctgtcgatctggttaaggacgtttttgcatcagccacagaacgagacatatacactggagataaactggagattgttgtcatcaacagcgccggctctcaccgtgagttcattgagctaaggaaggattag</cdnaseq>

Protein Sequence

<aaseq>MARFEVYENNGGTCVAVAGADYCVVAADTRLSVGYSILSRDSSK IAHLADKCVLASSGFQGDVKALQRNLTAKELLYEHNHNKKMSCPAMAQLLSNTLYYKR FFPYYAFNVLGGLDSEGKGCVFTYDAVGSYERTGYSAQGTGAALMMPVLDNQLKSPSP LLLPARDAVTPLSQSDAVDLVKDVFASATERDIYTGDKLEIVVINSAGSHREFIELRK D</aaseq>

Gene Sequence

<dnaseqindica>196..338#915..996#1212..1341#1439..1581#1717..1803#1904..1978#gcctccccgcgacgccgcgccgccccgccccgcccgatcgccgccgcactcgccgcccgtccgcctcgccgcaacgcaccgcgccaccgcgccgcgccagcctgagggagagagagagacgccgaggtttgaggttggtgagggagctgaggcggcgggagaaggaggaggagcgagagcgagggagagagatcgatggcgaggttcgaggtgtacgagaacaacggcggcacgtgcgtggccgtcgccggcgccgactactgcgtggtcgccgccgacacgcgcctctccgtcggatacagcatcctcagccgcgacagctccaagatcgcccacctgtatgttttccaaaccctccttcctacctacctactcacgtttgatgatgtgtggtccgatttgcgaattggactcggttggattcggcgattctgattaatcccccgcttatagttagtttgttagttagtcagttagtcaatcatggatgcgttgctagggatgaatttgtggtttttaattaccagagagacagagatttcacatgttttctttttagaagggaagggaagagactgcatatgttgtgaatttgaaaaaaataaaataggcctagctgaaattttgtggagtgcgcatgaatttattgggtagtattactgatgttgattttctgcacccgaaattatacgtgaggagtaaattgaatctgaatgtatcgttggatgaaggttcagcccaaatcctctgtttcagtgcacaaactttcctatagtaacttctgcaaactatcccttaaaatattgctaccaaataatcacgacgcagctgcgcataacatatttgttggaaagctctctctctttttttttctgaataaagtgctaatgccgtttccctaaaccttcaattagagcggataaatgtgttttggcctcatctggatttcaaggtgatgttaaagctttgcagaggaaccttactgccaaggaattggtaagtctgaacaattctctaaaaccatctgtaactgcaagaaattttcatgattaaccacattttcgacaactttatcgcaataatctgatctactatctgccctgaccctgaagattatctgatcttttacatggttctttgtttattcaaagttttgatcatgaacagtgtttctattcagtacaagcttatgatcatttctgcttttatagctttatgaacacaaccataacaagaaaatgagctgccctgcgatggcgcaattactgtccaacacgctctactacaaaaggttcttcccatactatgccttcaatgtgttgggtggacttgacagcgaaggtatgatttggggttacttctttacctcttacagtggccgctcatcagtatgaacgtatgatcacgacctgtgagaatatcttttcttcttttgcaggtaaaggatgtgtcttcacatatgatgctgttgggtcttatgaaaggacaggttatagtgctcaggggacaggtgcagctttgatgatgcctgttctggacaatcagctaaaatctcctagcccattactacttccagctcgggtgagttatataatttcagctagtgcttgactctctagaagaattgtgaaaacaaaacaatataattcgtttatgagatacaagtatgtttcttctgacgaatgagagctctaataattcactgttattatgcaggatgcagtgacaccattatctcaatcagatgctgtcgatctggttaaggacgtttttgcatcagccacagaacgagacatatacactgtatgatgatttaaatctctttggttgctcgaagttaatcactagtggccaactaaacagtattgattcaaattctaattttgttccatgaattttgcagggagataaactggagattgttgtcatcaacagcgccggctctcaccgtgagttcattgagctaaggaaggattagcgtgggatactatcaaaccacctcgtacctgtgcaacaacaataccattcagttactagcagaatgtgccttttccttgccagatgtatttaaattaccgttgtattattcagtgttcaccattattacggaagtggttacgtaagacattttgtagtctttctatctgaactatgcgtatctgaattgctcactgaatttttcttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0529100, RefSeq:Os08g0529100