Difference between revisions of "Os08g0536800"

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(Created page with "{{JaponicaGene| GeneName = Os08g0536800| Description = Similar to TA1 protein (Fragment)| Version = NM_001068900.1 GI:115477538 GeneID:4346166| Length = 2235 bp| Definiti...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os08g0536800|
 
GeneName = Os08g0536800|

Revision as of 20:53, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0536800

Description

Similar to TA1 protein (Fragment)

Version

NM_001068900.1 GI:115477538 GeneID:4346166

Length

2235 bp

Definition

Oryza sativa Japonica Group Os08g0536800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:26929071..26931305

Sequence Coding Region

26929551..26929646,26929790..26929939,26930034..26930111,26930206..26930274,26930439..26930477

Expression

GEO Profiles:Os08g0536800

Genome Context

<gbrowseImage1> name=NC_008401:26929071..26931305 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:26929071..26931305 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggatgctgcaagcactggtccctggttgtgacaaggttactggaaaggctctcattttggatgagatcatcaactatgtacagtcgttgcagaaccaagttgagttcctatccatgaggattgcttcaatgagcccagtgttgtatggctttggaatggacagcgatggcctccatgaccaaaagattggaggcatgttccaagaagcccttgcaatgcctaatccagtactgaaccaatcaagcccagctccatctcaagctatcatggacacaacctcaaccacatcctactcactgcaaagccagcatggagccatctctttctctcaggacaatggcagttacctgatgcaagcagtgggggagccaaggcagcaggagatgctcaatcaattggtgttcaacaacatgtgctctttccagtag</cdnaseq>

Protein Sequence

<aaseq>MRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIAS MSPVLYGFGMDSDGLHDQKIGGMFQEALAMPNPVLNQSSPAPSQAIMDTTSTTSYSLQ SQHGAISFSQDNGSYLMQAVGEPRQQEMLNQLVFNNMCSFQ</aaseq>

Gene Sequence

<dnaseqindica>1660..1755#1367..1516#1195..1272#1032..1100#829..867#agccaaacttgctctactctttagcctctgccaagaagaagtagtactcctcttttctctgaagaaaccaaacttccaatcaacaacaccaaaaagtttcagacacagagagttcagcagcagcaaagcaatggcagacttctcaccacaccactctctcctcctcaaggctactgctgctggagcagccatcgccaccaccaatgaccccaacatctcaagcttcttcctctacaaccacagccatggctcccaagctccacaacctgccaatgcagcagcagcagccattgtggaggatgcctcattggagagctcagtgtctgcagttcttgacacctctccatctgtggacaggaagaggaaggcagcagaagacagtgcacactccaaggtagctaacaactgacacaaccaaagcattgacattattgacattggcattcttgtttgcatctctgaaagagaacattgttagttgcattctggtttctgaattctgggtttttgcaagcaggatagctgcaaggatggcaagagcaggagagggaagaaggccagcaaagaagtggaggagaagagcaccactgaagatgagcctccaaaagggtacatccatgtgagggcaaggagaggacaggcaactgatagccacagccttgcagagagggtactactactgcacttcactttggttttggttttgatttttctgctgcttttgcatgagtggtttttggcttgcagcttctgcatcttttctcctggtctctgattcttggtgacattttctctctacaggtgaggagggagaggatcagtgagaggatgaggatgctgcaagcactggtccctggttgtgacaaggtaaaaaataagttggttactatttaactattacatgctctagttcaattctttcctctcatttttatttttgagagtaattattgttgagttgtacagttgtagtgacatcttgctaatgcatggctctaactttgataagaaacaactgtgcttttcttcaggttactggaaaggctctcattttggatgagatcatcaactatgtacagtcgttgcagaaccaagttgaggtacactaaaaaaaaataaaaaaaagaagtaatacttcatttttgaaaactttggacaggatgacattttctttgttttgtctatatggtgcagttcctatccatgaggattgcttcaatgagcccagtgttgtatggctttggaatggacagcgatggcctccatgaccaagtaaatatctaaataaatatttgtaccttgaactaaatatgcctaaaattaatttcttgtgtaaagttagattaatgttcttaatctttttcagaagattggaggcatgttccaagaagcccttgcaatgcctaatccagtactgaaccaatcaagcccagctccatctcaagctatcatggacacaacctcaaccacatcctactcactgcaaagccagcatggagccatctctttctctcaggttggcacatgtccacctttctttggctaaatcatacatgaaaatgtcccaatttagctacatatatcatggcatcaaagtaaaaaaaatccaacaattttacccacctgaggtcatcactgaatgtgtgcatcccctttcaggacaatggcagttacctgatgcaagcagtgggggagccaaggcagcaggagatgctcaatcaattggtgttcaacaacatgtgctctttccagtaggggaagagtgacagagaaagcaagaaaaaaggaccccacattgacaataggtactgcaaccaaagttcattaattgtgactttgtgagaccctgaatattggatttactactgtaaattttctcttaactgcttcttctaatatataaaagtcttctgaaattttgaacaggaggaaataataatgctgcaagattggtaggagcatgcaatgcaccagataagtttgagatgttggatctagtccatccccttgtctggaggcagtctacaacattgtaagaggattttggagggaagaacagcaagcgagtagagttttctacacatttttcagagactttgtaatattttgtagctccttatttggttaggttctgcccatgaagatttcctcaacggctgcactgccaccaccattgtactctacttcatgaaattattttgttaatataaaaagagagctattgctactgttcct</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0536800, RefSeq:Os08g0536800