Difference between revisions of "Os08g0545700"

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(Created page with "{{JaponicaGene| GeneName = Os08g0545700| Description = TraB determinant family protein| Version = NM_001068952.2 GI:297608929 GeneID:4346222| Length = 1765 bp| Definition...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os08g0545700|
 
GeneName = Os08g0545700|

Revision as of 20:54, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0545700

Description

TraB determinant family protein

Version

NM_001068952.2 GI:297608929 GeneID:4346222

Length

1765 bp

Definition

Oryza sativa Japonica Group Os08g0545700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:27417500..27419264

Sequence Coding Region

27417500..27417857,27417926..27417951,27418111..27418242,27418341..27418415,27418523..27418615
,27418762..27418860,27419010..27419264

Expression

GEO Profiles:Os08g0545700

Genome Context

<gbrowseImage1> name=NC_008401:27417500..27419264 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:27417500..27419264 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcagcggggcccaccccatccacggcggcgtcgttccggccgccgctgccgccgccgccgccgtgcttcgactacagggaggccatgctggggcacacgcgggcggccgcggtgaccgccgcggacccggcgctcgccgcgctggtcgagtcaggcgcactggtgcgcgttccccggcggcggttcgggcccgtcccggcgtggcggccgccggagttcgtggagccagaggacgtctggatcctcgggacgtcccacctctccgaggagtccgtcgccgacgtcgagcgggtgctccgcgccgtccgcccggacaacgtcgtcgtcgagctctgccggagcaggcaagatcgtcagccttcactgcagagctggaatcatccagaagatggtaattcttttctgcttgggacgatgcttgcaggtgggcagactgcacttgctctgcgtctgcttcttgccgttttctcctcaaagatctcttctggtgcaaaccggcccttcggagaagagttccgagcggctaggaaggtgtctgaagatcttggcgctcagctcgttcttggggatcgtccaattgaaataactcttgaacgagcttggaaatcccttagctgggatgagaagactaaattggtagtttcattgttccgtggaattacctctacaactgacacaagtcaggatgagaaagctgcaggtagcccctacgagttgtatgagaaactgagcatctcatatccctcactactgcaacctctgatacatgagcgtgacatgttccttgcatggtctctgaagaggagcaaagctgtaaacaagagcaaaactgtcgttgggatcattggaaagggacatatgaatggtgtggtgtatgcactgatttctgatcaaggagacttgagattccgtgatcttgttggtagagcatcatctgatacctgggcaagctcactcatcaaagggctggttagggacacaataatagggattgtactttgggggttgtatgaacagctgcatgctgtcttctaa</cdnaseq>

Protein Sequence

<aaseq>MAAGPTPSTAASFRPPLPPPPPCFDYREAMLGHTRAAAVTAADP ALAALVESGALVRVPRRRFGPVPAWRPPEFVEPEDVWILGTSHLSEESVADVERVLRA VRPDNVVVELCRSRQDRQPSLQSWNHPEDGNSFLLGTMLAGGQTALALRLLLAVFSSK ISSGANRPFGEEFRAARKVSEDLGAQLVLGDRPIEITLERAWKSLSWDEKTKLVVSLF RGITSTTDTSQDEKAAGSPYELYEKLSISYPSLLQPLIHERDMFLAWSLKRSKAVNKS KTVVGIIGKGHMNGVVYALISDQGDLRFRDLVGRASSDTWASSLIKGLVRDTIIGIVL WGLYEQLHAVF</aaseq>

Gene Sequence

<dnaseqindica>1..358#427..452#612..743#842..916#1024..1116#1263..1361#1511..1765#atggcagcggggcccaccccatccacggcggcgtcgttccggccgccgctgccgccgccgccgccgtgcttcgactacagggaggccatgctggggcacacgcgggcggccgcggtgaccgccgcggacccggcgctcgccgcgctggtcgagtcaggcgcactggtgcgcgttccccggcggcggttcgggcccgtcccggcgtggcggccgccggagttcgtggagccagaggacgtctggatcctcgggacgtcccacctctccgaggagtccgtcgccgacgtcgagcgggtgctccgcgccgtccgcccggacaacgtcgtcgtcgagctctgccggagcaggcaagatcgtcgttagctaggcctgctcagtcagacatggccgtgaaatctcttcttgagctaattgctgccattgcagagccttcactgcagagctggaatcatgtacgtgaccaccgattcttctgccggcgagccgctcctcaaatccaacatgttctctctcggtggctccaagttcttcggagccgtcaaccggagcatcaatctgggtaattgaaattctttttcactctacaatgatataatcctactgccaatcagccagaagatggtaattcttttctgcttgggacgatgcttgcaggtgggcagactgcacttgctctgcgtctgcttcttgccgttttctcctcaaagatctcttctggtgcaaaccggcccttcggagaagaggtgtaattaaattattcctgtcattagttttcattttttttctgatgatttaattcaactcttgaaaacaattcctcttttactccatcatttgctagttccgagcggctaggaaggtgtctgaagatcttggcgctcagctcgttcttggggatcgtccaattgaaataactgtatatatacaactactactatatatctgcgaactcttttccgatttgcagttgcgcaaaatataaatgataagttttctgaagctcatgccaagttgttgttgcagcttgaacgagcttggaaatcccttagctgggatgagaagactaaattggtagtttcattgttccgtggaattacctctacaactgacacaagtgtaagttctaaatactcctagaagtatctctctgttctcagcagtgttgcatttttacacgagtgtaatttcctctaaatcatttcattgcaaaacataattttcgcgttatttacgtcgatatccttgtttgagtggtaatgcagcaggatgagaaagctgcaggtagcccctacgagttgtatgagaaactgagcatctcatatccctcactactgcaacctctgatacatgagcgtgacatggtatattcctcggtaacttgtctgaattttacaacctgcagaaagatcactcatacgcagaaagttaattagttacgtatcttgcttccaagtgcatggtctctgaattgaacaatctatctgaagctaatttgtcgtctgttttacagttccttgcatggtctctgaagaggagcaaagctgtaaacaagagcaaaactgtcgttgggatcattggaaagggacatatgaatggtgtggtgtatgcactgatttctgatcaaggagacttgagattccgtgatcttgttggtagagcatcatctgatacctgggcaagctcactcatcaaagggctggttagggacacaataatagggattgtactttgggggttgtatgaacagctgcatgctgtcttctaa</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0545700, RefSeq:Os08g0545700