Difference between revisions of "Os08g0559900"
(Created page with "{{JaponicaGene|
GeneName = Os08g0559900|
Description = PAP/25A core domain containing protein|
Version = NM_001069040.1 GI:115477818 GeneID:4346320|
Length = 5900 bp|
Def...") |
|||
| Line 1: | Line 1: | ||
| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os08g0559900| | GeneName = Os08g0559900| | ||
Revision as of 20:54, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os08g0559900 |
|---|---|
| Description |
PAP/25A core domain containing protein |
| Version |
NM_001069040.1 GI:115477818 GeneID:4346320 |
| Length |
5900 bp |
| Definition |
Oryza sativa Japonica Group Os08g0559900, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:28102064..28107963 |
| Sequence Coding Region |
28102120..28102190,28102525..28102559,28103189..28103377,28104030..28104209,28104537..28104721 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:28102064..28107963 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:28102064..28107963 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggccgccgccgcctctcctcctgtcccgtccaaagtcgacgcctcgtctcggcccgaccgctcccccaggccgcagagcttggaaatctcatgggattcacaagcagcgttatgcaagcgtgcagagagttgcgagttggaggcagaagtaccctctatcaatcctactttgcttccagttctcgaggatttacttatagaattatatgcaatattgcgtccaaagcctgatgactatgagcaacggcatttgatgatcgatgtcttcaacaaaatagcagaagagatatatggtaaaaagaaggggtttccagttgtggaagcatttggatcgttcacaatggatctatttacttccaaaagtgaccttgacctctctgtcaactttaatgctgattttcatagtcaatttgctcgcaaggacaagatttctgttattcggaacctcgcaaaagttctatatgctcatcagaggaatggccgttgtcatggggttttacctgttgtaactgctaaagttcctgtactgaaggttattgataagggaactggggttgagtgtgatatttcagttgagaacaaagatggcatgtcaagatcaatgatatttaaacttatttcatccattgatgaaagatttcagatactatgttatctgatgaaattctgggcaaaggcacatgatgttaattgccccagagatcgaacaatgagctcaatggcgattatctctttagttgctttccatttacagacccggcgacctccaatcttacctgcattttctgccttgttgaaagatggtccagactttccaagtattcagagaaatgtctcactagttgaggggtttgggagcagaaataaagaatcagttgccgagctttttgtgtcacttatgagtaaactactatcagtggagggtttatgggagcaagggctctgtgctagcaattttgaagggtcatggatctttaagacctgggaaagaggagttggtaacttgagtgttgaggacttcttggaccggtcacagaattttgccagagcagtaggcaaggaggagatgcagaaaatcagcgaatgcataagggtcgctgttttgaatttgaacaatttctttaggggtaaaattgatgcaccaaagctgaagaaccttttgtttgagccgcctcatcaggatgagctgatcagtaatcccagtctaaagcgtcctaagaggaaggaccacccaacgcatggcccagaaagcaacccacagcagcaaaagaaagcgaagcatattattggcccagaaagcaaccagaagcagcaaaagaaagtgaagcatactgtaaaccctggaccggccgctagtagatctgccactaatttacaccgtcctaccgcatttgtgcctcaaatacggcccatccaaccaattaatcaggtttcccacatacctcaacctttggttgaccctatgtttgcttatgggttaccaccacaacagcatctacattcagctcccctttattgtcaggggttactaggtcaacagcagggtaatttcatccacctgaatcctggaatccaaccgcagcagcaagcccaacatatgtttgtccctttactagaacagcaacctgtgatcaatggttttcacccctatgatttccatttggcccagctaattcagcataacgagaatatagcgttacaaaggaatatagcttatggaacctatccatattacaggagatga</cdnaseq> |
| Protein Sequence |
<aaseq>MAAAASPPVPSKVDASSRPDRSPRPQSLEISWDSQAALCKRAES CELEAEVPSINPTLLPVLEDLLIELYAILRPKPDDYEQRHLMIDVFNKIAEEIYGKKK GFPVVEAFGSFTMDLFTSKSDLDLSVNFNADFHSQFARKDKISVIRNLAKVLYAHQRN GRCHGVLPVVTAKVPVLKVIDKGTGVECDISVENKDGMSRSMIFKLISSIDERFQILC YLMKFWAKAHDVNCPRDRTMSSMAIISLVAFHLQTRRPPILPAFSALLKDGPDFPSIQ RNVSLVEGFGSRNKESVAELFVSLMSKLLSVEGLWEQGLCASNFEGSWIFKTWERGVG NLSVEDFLDRSQNFARAVGKEEMQKISECIRVAVLNLNNFFRGKIDAPKLKNLLFEPP HQDELISNPSLKRPKRKDHPTHGPESNPQQQKKAKHIIGPESNQKQQKKVKHTVNPGP AASRSATNLHRPTAFVPQIRPIQPINQVSHIPQPLVDPMFAYGLPPQQHLHSAPLYCQ GLLGQQQGNFIHLNPGIQPQQQAQHMFVPLLEQQPVINGFHPYDFHLAQLIQHNENIA LQRNIAYGTYPYYRR</aaseq> |
| Gene Sequence |
<dnaseqindica>57..127#462..496#1126..1314#1967..2146#2474..2658#2777..2872#3072..3117#3238..3344#4077..4178#4264..4998#acttcacgtcttcaccgccagaaaccgacggccgccgccgccgccgccgcatctgcatggccgccgccgcctctcctcctgtcccgtccaaagtcgacgcctcgtctcggcccgaccgctcccccaggtccgttattcttcgctcctctgccccccttcgtgttccgctgatccccttgtgcttttggggggaattggagtcgccgcgtgcgtgcgtacgaccaaattctactcggattcttcttcttgctcatggtactagtagttctataagacgagagagcgaggggattatgctttgtagatactagtatatgcttaagcttaatcctctccttcagaatttgctgccatgtctagctttctggattggtacgactacggaccaacccgatttattttcccccggtttatgatgacctctcagttaaaatttctttccttttggtgtcatcctgcaggccgcagagcttggaaatctcatgggattcacaaggtagtactatttaactatctgtttattgctgctcccaatttttttttattattggtgtatattacttcctgcctcatgctgctcttcgattcaagcacatcaagaaccaaacctttctgttagattcctctgctacggtatcatttctgtacaccagggcatcacagataacaactgtatcatgtgaccatgtcagatgcatgcaagcagcatgctatatcttctgcactcaatacaactggtggacctagactaatactcctatatttcttatgagtaatgacagtttcattttgcggcaaagatagctgcttgtctgtttttccgtccacaaagttatcctgtagcctcttgtcatgtttcgcttctctagatttcctgactacttagaaataagtcaatagcttctctctgcgcaagcaaatgctggcagctctaaatatatacgtggtggctgtgattgtttgcaaacatgacttctttatatgaaggagtactctgggcatgtaaatgctgaaacagttgtgaattaccatgcttgataccaattacacggacttctgcgccattaatgaatactttcatgtacgctgcaactgataccttttatttaaattttgaattactagcagcgttatgcaagcgtgcagagagttgcgagttggaggcagaagtaccctctatcaatcctactttgcttccagttctcgaggatttacttatagaattatatgcaatattgcgtccaaagcctgatgactatgagcaacggcatttgatgatcgatgtcttcaacaaaatagcagaagagatatatggtaagagttatatttcatctgttatcatgggtcgatgaattatgctttcaaaatatgcgcttttgatcattgtaattgctgactatgcttgaaaatataatatgagagttgcaaaagatgcattttcttgtaattcatacacatatgcaatcagggaaattcatttgcagttcaacaatagtgtgaatagggttttaaacacctgcagttatgattcatatgcgtcagcattcagcaaaatatgctttttctgtgcacctcagttatggattgctgacacctaatggtcaagcaaagacttttgcttctgatgctagaaagatgcatagtgcaaaattttgtgttgaaacttgtacataacagagcattggtgaaaaggataatgcatttggaaacacaagcatgaaaattatatgaatttggcttgatttgtactacaaatatgcctagttaacctccttttttgactgttagttgatcagttaacttcaacatgcattgttcagatttctgtgtgtgtctacacttttgcaatacacttttctttacatgcaagattccttcttttaccatgaatacttagtctctgcctgaatattgcaaatttgtgtgatattatgacctgtttcctgattatgatgcctccttccaggtaaaaagaaggggtttccagttgtggaagcatttggatcgttcacaatggatctatttacttccaaaagtgaccttgacctctctgtcaactttaatgctgattttcatagtcaatttgctcgcaaggacaagatttctgttattcggaacctcgcaaaagttctatatgctcatcagagtaattatctacactctctaggtttatgtaacagatccaaaagggtcaactttatatccatatatttatggtgtcccttcatatatgttgcaatatgtgtcacacaccaaatatctaaaatttaaatgaagaatttaaattagttttgttattaacagtatatcaaattatcggtgtatgtttgataagaagtgtattctccttgacatagtgttgacaattggacataaataacttcattttgatatatgtcacctatttaatagaaccttttgatgccaattttaatgtgatttcgtttccttgtccttatattgtcaatatcagggaatggccgttgtcatggggttttacctgttgtaactgctaaagttcctgtactgaaggttattgataagggaactggggttgagtgtgatatttcagttgagaacaaagatggcatgtcaagatcaatgatatttaaacttatttcatccattgatgaaagatttcagatactatgttatctggtattgcaattctctgtcacatttttttcgttccaatgggcaataaaattgttgcaagaatccccataaagtggccttctaaaatatgtgacaccaaccgtttctgttaattctgcagatgaaattctgggcaaaggcacatgatgttaattgccccagagatcgaacaatgagctcaatggcgattatctctttagttgctttccatttacaggtttgttactttgacttgagtttttattggactttttagtcatgagtatcaagtagttagggtagcttcaatggcctcatggaatttccattaaagttctacagcctgtatgtataagcttgcagttaatcctaagtccttttttctgttggcaaaaagagaaataaacacactttttattaaacaatgtggattacagacccggcgacctccaatcttacctgcattttctgccttgttgaaaggtactctctctatttttaggtgtatgtcattctcactgctacgctttcctgggattggtttctctgttgttgatataaaacttatatgaagaaactaagataatttccatcgtcttgtagatggtccagactttccaagtattcagagaaatgtctcactagttgaggggtttgggagcagaaataaagaatcagttgccgagctttttgtgtcacttatgagtaaagtaagtgaattaaaaatgcaccttccatttatgtttgttacaggccaatattctattttgaatccatagggatattgttgagttatggttgttttgccctcatttcctagagtttttacattgattgacaaagggatatctccccttgcacatgacttgatctaaacccctgcaaatgtctgaacaaatgcccagtttgaaaaagattattgactggattattgtagtggattatctgcacggcggtaaatacaaattaaatattttgataaaaaatattaataaataagaagcttagaataagggatctaagcaatgcagtagaagaaaggtttttgagaaaacatatttttagaggctaataatccgtgacaaaaatctgtgacagtaaactcccagtttgacccagctgggacgggacggtcctgttcacctggtccatgtcactgttctcttgtgcccttctaaacattgttctcttgtatagcatcatcgacttcattatctaattaagggatcttgttacacagttagagagggttataccacctgagtccatctaatttgttgctaggcaaagttgtttgcttattttggtgtcgtatatacgtatgaacggtttgtaagctgttcattgattacttagttaacattacttccacaaaagagcccttccttcttaatgtcagaactcattatgctgacagacactattgaccttctctcatgcagctactatcagtggagggtttatgggagcaagggctctgtgctagcaattttgaagggtcatggatctttaagacctgggaaagaggagttggtaacttgagtgtaagcttttccatgaattcattgtgcttttttagtaacttttgcaaaagtttgtttatttatacacaacaagcaattcatgcaggttgaggacttcttggaccggtcacagaattttgccagagcagtaggcaaggaggagatgcagaaaatcagcgaatgcataagggtcgctgttttgaatttgaacaatttctttaggggtaaaattgatgcaccaaagctgaagaaccttttgtttgagccgcctcatcaggatgagctgatcagtaatcccagtctaaagcgtcctaagaggaaggaccacccaacgcatggcccagaaagcaacccacagcagcaaaagaaagcgaagcatattattggcccagaaagcaaccagaagcagcaaaagaaagtgaagcatactgtaaaccctggaccggccgctagtagatctgccactaatttacaccgtcctaccgcatttgtgcctcaaatacggcccatccaaccaattaatcaggtttcccacatacctcaacctttggttgaccctatgtttgcttatgggttaccaccacaacagcatctacattcagctcccctttattgtcaggggttactaggtcaacagcagggtaatttcatccacctgaatcctggaatccaaccgcagcagcaagcccaacatatgtttgtccctttactagaacagcaacctgtgatcaatggttttcacccctatgatttccatttggcccagctaattcagcataacgagaatatagcgttacaaaggaatatagcttatggaacctatccatattacaggagatgacagttgcagtatgagaatgtagctaggtaatgtttctgagataggaagttcacaccgtcgccatgtaccctggtgcaaatcaattcgttgatttgttgtaaaatttagttgtgtgttgtcatatatgtgctggggaagaaattaagtagagaggcagattttgcatagctatcaaaagttctggcaaaaccatgctgctgactctgccacctagttttgtcaccgcagattgtgagctctcatttttccttgtgcaagtgggggtaagaagaattcacgattgtcatggatcaagattgagaggtgtgctgcaaagcttgctgttgaaaattctgtcagtcatgcaagattgatggatgctgatgatgaatcacttggtgtactagcttatatataatagtaaaaatatccagcaagaccaacaagaagcaactgcattgcatcagcatgttattcctctgctaagcatccaccactgcagagcaacctcatggacaagaaatggcaacatctgcactgctgctggtgataggtatggatgagctgttccaggtttgttgggtatcagctgataaactgggactgttccaggtttgttggtatcagcaaaaactggagctgccgcccatggtaatctcaattctggtgttgctgatgaccacataacctgataagatggaaactgcatgcaactcacatagcccggaacaagatgctttccatcatcactcgtgttttgcctgatgcgatggaaatacccagacaaggtgagcttttgcacgaaaatgacatgaaaaataatatgcctcccttttccttgcttgcactgtacatacctgaagcatatgatgtaccagtacgatgggatagtgaacagtatgccgttctgttttttgccatgg</dnaseqindica> |
| External Link(s) |
