Difference between revisions of "Os08g0561500"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os08g0561500| Description = Similar to Nodulin-like protein 5NG4| Version = NM_001069047.1 GI:115477832 GeneID:4346327| Length = 2837 bp| Defin...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os08g0561500|
 
GeneName = Os08g0561500|

Revision as of 20:54, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0561500

Description

Similar to Nodulin-like protein 5NG4

Version

NM_001069047.1 GI:115477832 GeneID:4346327

Length

2837 bp

Definition

Oryza sativa Japonica Group Os08g0561500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:28206737..28209573

Sequence Coding Region

28206862..28207080,28207226..28207814,28208907..28209364

Expression

GEO Profiles:Os08g0561500

Genome Context

<gbrowseImage1> name=NC_008401:28206737..28209573 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:28206737..28209573 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>aatcagaatggcggcggaggcggatgcacggaaggtgtgcgggttgccggagcgggtgcagctccatggggcgatgctggcgctgcagttcggctacgcggggttccatgtggtgtctcggtttgccctcaacatgggcatcagcaagctcgtcttccccgtctaccgcaacatcatcgccctcatcctcctcgtccccttcgcctatttcctcgagaagaaggatcggccgcagctgacgctgagcttcgtggtgcagttcttcctgctggcgctgtgcggcatcaccgccaaccagggcttctacctcctcggactcgacaacacctccccgaccttcgcctccgccatccagaactccgtcccggccatcaccttcgccatggccgccgcgctccgcatcgagcgcgtccgcctcgaccgccgcgacggcgtcgccaaggtgctcggcacgctggcctgcgtcgccggcgcctccgtcatcacgctctacaagggccctaccatcttcggtcccaagctgcagctgcaggcggtggcggaggtgccgttgagggcggcgatcgccggagaggggaagaactggacgctgggctgcgtgtacttgatcgggcactgcctgtcgtggtcgggatggctggtgctgcaggcgccggtgctgaagaagtacccggcgaggctgtcggtgacgtcatacacctgcttcttcggcgtcatccagttcctcatcatcgccgccttcatggagagggacgccgacgcctgggccttccactccggctccgagctcttcaccatcctttacgccggattcatcgcgtcgggggtggcgttcgcggtgcagatatggtgcatcgacagggggggcccggtgttcgtggcggtgtatcagcccgtccagaccctggtggtggccatcatggcctccctcaccctcggcgagagcttctacctcggcggcatcatcggcgccgtcttcatcatcgccggcctctacctcgtcctctggggcaagagccacgagcgtgctcgcctcgccaaggacgccgccgccattgccaccgaccgcgacgccgccccttgccggatcatcgccgccggcaagcagtcctcctccgtcacccagcccctcctgctgcctacctcctcctcctccgacaacgccgtctgaccgatcgatcggtctctttattaattacatgcgtgcatgcttcgagccatttgatcgatcgattagctgctagtactacagacttagcttgttga</cdnaseq>

Protein Sequence

<aaseq>NQNGGGGGCTEGVRVAGAGAAPWGDAGAAVRLRGVPCGVSVCPQ HGHQQARLPRLPQHHRPHPPRPLRLFPREEGSAAADAELRGAVLPAGAVRHHRQPGLL PPRTRQHLPDLRLRHPELRPGHHLRHGRRAPHRARPPRPPRRRRQGARHAGLRRRRLR HHALQGPYHLRSQAAAAGGGGGAVEGGDRRRGEELDAGLRVLDRALPVVVGMAGAAGA GAEEVPGEAVGDVIHLLLRRHPVPHHRRLHGEGRRRLGLPLRLRALHHPLRRIHRVGG GVRGADMVHRQGGPGVRGGVSARPDPGGGHHGLPHPRRELLPRRHHRRRLHHRRPLPR PLGQEPRACSPRQGRRRHCHRPRRRPLPDHRRRQAVLLRHPAPPAAYLLLLRQRRLTD RSVSLLITCVHASSHLIDRLAASTTDLAC</aaseq>

Gene Sequence

<dnaseqindica>126..344#490..1078#2171..2628#caagctgcatgctagctagctaattaagctccccagctcgattcctagctatctaattagctagcgagggatcgatcgagagcttctccttccgggcttccggccagccggcggggaatagctagaatcagaatggcggcggaggcggatgcacggaaggtgtgcgggttgccggagcgggtgcagctccatggggcgatgctggcgctgcagttcggctacgcggggttccatgtggtgtctcggtttgccctcaacatgggcatcagcaagctcgtcttccccgtctaccgcaacatcatcgccctcatcctcctcgtccccttcgcctatttcctcgagaagtatatactgtctgctgtttaatttctgaattgaacctccgtcctcctagagtttcagtcagttgtaatctcgatcgatcgatcgatctgtagtgtaggtagctaacaattaattaatgtagacgaacgtggatgatggatgcaggaaggatcggccgcagctgacgctgagcttcgtggtgcagttcttcctgctggcgctgtgcggcatcaccgccaaccagggcttctacctcctcggactcgacaacacctccccgaccttcgcctccgccatccagaactccgtcccggccatcaccttcgccatggccgccgcgctccgcatcgagcgcgtccgcctcgaccgccgcgacggcgtcgccaaggtgctcggcacgctggcctgcgtcgccggcgcctccgtcatcacgctctacaagggccctaccatcttcggtcccaagctgcagctgcaggcggtggcggaggtgccgttgagggcggcgatcgccggagaggggaagaactggacgctgggctgcgtgtacttgatcgggcactgcctgtcgtggtcgggatggctggtgctgcaggcgccggtgctgaagaagtacccggcgaggctgtcggtgacgtcatacacctgcttcttcggcgtcatccagttcctcatcatcgccgccttcatggagagggacgccgacgcctgggccttccactccggctccgagctcttcaccatcctttacgccgtacgtatctatctccattctccctacgtatacgatctccatctattcacctacgtatacgatccatatgcatgcattactgctggtctttcgattattcctacctccaaatatcaacatgcaaattaattaattaattatttactgatcagctcatcttatgccaacctaattaagctagctagtagtggacaggactatacatacgtgcaacgattaatttattaagctaatctacagcctactttgtgttaattatatctgcaccagctcatggtcactttaatttattgacaatcattctgtatactgtactggattgaaaaagggccggaaatccatatgtacacttttcaatagtagtaactattttgtgacattaggaatataaatacatgcttgcaaatgtccatattgtatttaatttgtcctgctttagttaattagcacttagtactggtatatatctgtcagtaaagtaatgcaagttgatcgatttctgcggcagcagcagagtattatagcaagcatggtgcaacacagaagctagctgtacaaatgatcactttttttccgtaggataacatgctgggttgtactatatagttatcaatcatgcccttaaagttacctttggacgtttgtttgtcgacacacatcgccggcccataatgcatccgaccatgtactcctagcatgcatatatacagtacacttggctggaatatatacagtacttacttttccaatgaggacatgtttagtagggcttaatataaaatcataaatttaactcaaaagttaagcttggagtaaagttttagagcagcctaaacattactttaccactctagttaattttgtggtagtattttagtcaactccgctttcttttttaacggagctgaatctatttggtcgagcttcagcttcaaaagaggagttggagttgaagctagccaatgcatgaatcttcttaagccaaactaaattgttaactgcttaattaatcaatgaagtgcatggtttgcataatgaaactgaagatgagatgtgagagctgatgggggtaggtggtgatgatggatgcagggattcatcgcgtcgggggtggcgttcgcggtgcagatatggtgcatcgacagggggggcccggtgttcgtggcggtgtatcagcccgtccagaccctggtggtggccatcatggcctccctcaccctcggcgagagcttctacctcggcggcatcatcggcgccgtcttcatcatcgccggcctctacctcgtcctctggggcaagagccacgagcgtgctcgcctcgccaaggacgccgccgccattgccaccgaccgcgacgccgccccttgccggatcatcgccgccggcaagcagtcctcctccgtcacccagcccctcctgctgcctacctcctcctcctccgacaacgccgtctgaccgatcgatcggtctctttattaattacatgcgtgcatgcttcgagccatttgatcgatcgattagctgctagtactacagacttagcttgttgagaaccaaatgatgttgatgatttgcctttgcctatgatatcgatcgacattaaactagctagtagcttgcttgttttgctaggatttgttttgtttggatcatgcttgtgctttcttaatttgtaacgtcgcgagagattaattgctcaatgatgcttgtgctacattttgtataattaatgtacctacatgtgtgcttcattgtacct</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0561500, RefSeq:Os08g0561500