Difference between revisions of "Os09g0103800"

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(Created page with "{{JaponicaGene| GeneName = Os09g0103800| Description = Peptidylprolyl isomerase, FKBP-type domain containing protein| Version = NM_001188779.1 GI:297726688 GeneID:9267062| ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os09g0103800|
 
GeneName = Os09g0103800|

Revision as of 20:54, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0103800

Description

Peptidylprolyl isomerase, FKBP-type domain containing protein

Version

NM_001188779.1 GI:297726688 GeneID:9267062

Length

5607 bp

Definition

Oryza sativa Japonica Group Os09g0103800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:413723..419329

Sequence Coding Region

413723..413738,413867..413934,414849..415144,415275..415400,415484..415566
,416514..416628,416755..416847,416963..417021,417609..417684
,417812..417901,418050..418202,418294..418480,418752..418839
,419077..419125,419233..419329

Expression

GEO Profiles:Os09g0103800

Genome Context

<gbrowseImage1> name=NC_008402:413723..419329 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:413723..419329 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaccttctggggattggagttgaagcccggtgaggcctacacccatcactccgcgcccgcccgcctccggattacccaggctgtgctgggcagttgtgatcaaggttggactacactacaatgtgataccaatgacagggagactgtgcgcctctgtgttttaaatcctgggcttgctgtggcatgtcacctagagctggaattacagaaggatgagaatgttctcttatcagttgacggacagaactcgatacacctgtccggatactacacctgttcccatagtggcaatcatgggcgcaatagtcagaagcccactagtaaagctgtaggaagtactggcttcaataaaaagcatcaagatatttctgacaaggcaccagtgatagaggagatactagatgaccagacagtacagcagcaacagcagcaaggtgttaacatcagctcgaaggatgtagaaccttctcataaaaatggtcatggacaaaatagtgaatgggccacttgtggtaatggtactgatgatgacaatgataataatggtgctatgttttatccttcatctcgcaacaaaatggaagtagacgagcccacaggaagtaaagacaatgattatgattattggcttcctttccttgatgcttctgtaaagagaaaggcttctgaaactgatggagaaaatgtgtacacagagaagggggagttgaagacgccaaagatagagaatgtgctaagtgatcaaagtgtggatatggatcaagttaatgaacaaacgtgctcaaaaaatgtggaacctaatgaaattgatgatgtaaagccaactcgaggtcacaagaataccatggaagtagtacttcctctccttgattcttctgtaaagagaaaggctgctgagattgatggagaaaaggtgcaaatagagaaggccaaattgaagatgccaaagacagaggatgtaccaagtgatcaaaataatgctaatcaagtgaatgaacaaatatgctttaaaactgtggggtccaatgcaattgatgacgcaaagttaagtctaggtcaccagaataccctggaagatcttgacaagagtcaggagctaaatgtttcacaaacaaaagggcagaatgatgttgcagatcaaattacaaatcaagacacgcctacaatcacgagctctgatgaacgctacatttttactggtgctcttgaaactgatattgaacaaaaaaatcgaggggctgaaaatgaacaagttgaggtccatcgttgcccctttgaggtgcttgataatggtatcaaagtggagcatctggttgaggggaatgctaaagccaaagttgcatctaagggcaaacaggtttgtgtgaggtattgtggtcggttgatcaatggtgaagttatcgaccctactaaccttgacgacgacacccatacattcaggcttggcatgcgtgttggtggcaaaaggagactcacaatccctcctgctcaaggctatggtgatgttgcgacaccaaagataccagcaaactcttggctcgtgtatgaagtcgagttgctggaagtgaagcgagccaaaagggcacgttga</cdnaseq>

Protein Sequence

<aaseq>MATFWGLELKPGEAYTHHSAPARLRITQAVLGSCDQGWTTLQCD TNDRETVRLCVLNPGLAVACHLELELQKDENVLLSVDGQNSIHLSGYYTCSHSGNHGR NSQKPTSKAVGSTGFNKKHQDISDKAPVIEEILDDQTVQQQQQQGVNISSKDVEPSHK NGHGQNSEWATCGNGTDDDNDNNGAMFYPSSRNKMEVDEPTGSKDNDYDYWLPFLDAS VKRKASETDGENVYTEKGELKTPKIENVLSDQSVDMDQVNEQTCSKNVEPNEIDDVKP TRGHKNTMEVVLPLLDSSVKRKAAEIDGEKVQIEKAKLKMPKTEDVPSDQNNANQVNE QICFKTVGSNAIDDAKLSLGHQNTLEDLDKSQELNVSQTKGQNDVADQITNQDTPTIT SSDERYIFTGALETDIEQKNRGAENEQVEVHRCPFEVLDNGIKVEHLVEGNAKAKVAS KGKQVCVRYCGRLINGEVIDPTNLDDDTHTFRLGMRVGGKRRLTIPPAQGYGDVATPK IPANSWLVYEVELLEVKRAKRAR</aaseq>

Gene Sequence

<dnaseqindica>1..16#145..212#1127..1422#1553..1678#1762..1844#2792..2906#3033..3125#3241..3299#3887..3962#4090..4179#4328..4480#4572..4758#5030..5117#5355..5403#5511..5607#atggcgaccttctggggtaaaaaccctcctcctcttttttcgctttgcttttagtatttattttctccatcaccattctttacacatcactcactagctactatggtttctttcattatctactatatatatggcggtgggcaggattggagttgaagcccggtgaggcctacacccatcactccgcgcccgcccgcctccggattacccaggtaccaaaatcaccttacttcttaatctctaaagaaaagctgaaatcgaatatgaactgtgtcttgtgattgtattcaatggacgcacttcggcgctttgctactacttccttcctaattttaatgcatccaacaccatcttcagctggctctcgacaataaaataaatacagatttgtgtaacatatcaggatgttttcttacagctttttctgacacatattcttatgcatctgcttcattaaaatttaatgcctatatttttcatggtctacaagtgttgtctacaggtgaaaaaaccaataaaaagagagaacgactacatctttctcgaaaacgttactagtattttaagataacagcgtatacatttttgtgaatattacaatgagttttaagggcacctcaactctgtagaaccctctaaaagtatacttcttttgatgccattacctctataggtacttaaggagtatcgtgaccctcaaattggtcccataaactctatgttttattccttagaacaaactctaaaattggagccatttccattttctccccctaacacccactttcccaattgttctaaatcagcttcaaaatcccccctttctctctcgccttatgacacactttggaacaacattggagttgcttgagcaaagtggaacacactacaagatcgctagtgttccttcgaaaaatttacaaaaactattttgtaattatgtttccccattgattgacacaagcctgatcatgcattgcattgtagaggttcctccctttctgttttatggatatataatagtggtattctgtttctatttgaattttgaaaactagtaaaatcccaacaaaacaactattcacaattatcttacgatatgatttcgatatttcatattttacaggctgtgctgggcagttgtgatcaaggttggactacactacaatgtgataccaatgacagggagactgtgcgcctctgtgttttaaatcctgggcttgctgtggcatgtcacctagagctggaattacagaaggatgagaatgttctcttatcagttgacggacagaactcgatacacctgtccggatactacacctgttcccatagtggcaatcatgggcgcaatagtcagaagcccactagtaaagctgtaggaagtactggcttcaataaaaagcatcaagatatttctgacaagtatgtatatctttaattctatccttcagtttcttttttgtttcattcaaagtagcattcgcttctttcttgaaatccaatagctcctttgctttgtaaacattctaacgcctagtggtgggaaatgcagggcaccagtgatagaggagatactagatgaccagacagtacagcagcaacagcagcaaggtgttaacatcagctcgaaggatgtagaaccttctcataaaaatggtcatggacaaaatagtgaatggtaactttcttggatgatgcaattttccatttttcttcaatgcagcatcatgtgttcttcccttctatttaatgtgtctacagggccacttgtggtaatggtactgatgatgacaatgataataatggtgctatgttttatccttcatctcgcaacaaaatggaaggtacatatttcacctatgtaaccatgtaatctaagttatttcttttatcgttttcttttcatggctttaaagccatgatcacctgagaattcttccttccgtagcttttctgatttttacttgtatgctaagttgatgctacagggtgtcatttaccattggtcattgcgctgatttttgctataactaacaaaactttcgcatgtatcgtgtttaatgattattccttaatattactgttttggatgttgattcatggatagattaaggggctgacattgggttaaaggcgaaatttttttcattggcgccatcatgtcctgatcgctagcagactctgatcaagttgactttatgtttctttattgcttcatgtaatggggctacgtctacgtgtatcccttttgtagagagggttcccctactatccacatgaatagtaatcgtaaaaagtaacttgccccttcagattgtaatctagtttctaaaaaatctatgtctctatctaacttatttaactactaataactttttggactaatatgtaggatattcaattaacaaatccctttccctaggaaaataattaatcatttgggaaataggggtactgtcaatgcacagtacttctaccataagcattagtataattatgttctcatgatgtatcctatgcatgatatattgtcattgagtgttggattatcaatgactctcataccaaacataataaagaattgagctgtcaacaaaaatataataaagaggtgatatttgattgctttgtcttgacttgtgtctaattcatgcaagtcttgagaaaaactgacagcaaagcatgattgattgttgatgctattttccattttttttcttcttgctggtgatgccaatgtatattgcccacataaatgctcatcaattgggaatttatattctttatgcagtagacgagcccacaggaagtaaagacaatgattatgattattggcttcctttccttgatgcttctgtaaagagaaaggcttctgaaactgatggagaaaatgtgtacacagagaagtatgcaccttttgaattaagtccttcaattctgttgttgtttcatagaacatgaagcaacatttgcttcattggaatttagtttatctcctttggatgtattgaggtattgtcattatgtaataggggggagttgaagacgccaaagatagagaatgtgctaagtgatcaaagtgtggatatggatcaagttaatgaacaaacgtgctcaaaaaatgtgtaagtatatattataaaaatcttgaatattcgaatgatttgcataatgctcaattatttcccaaatacagtgttttttttttataatgcagtgcatatttttcttgttcaatagggaacctaatgaaattgatgatgtaaagccaactcgaggtcacaagaataccatggaaggtgatgttcttgacagtactactgctaccataacattagtattatattatgcatacatgatgcatcctgtgcatgttacaatgtcatgggtgctgatttatattctctgttgatggaacttccaggagatggaattaagcctatgaataaaccacataccaaatataataaggattagtgattttgtttggagggtttccatttaagagtacaaggtccacttatagaagtaatataatgaaacctggactaaaacttgtttgcccaaactggaattaaactgaaactctaattgactataagaggtaacctcagaggaacaatggttatattggttaagtgggggagacaaactttaagcttgactttactagctcagtccttacttatgtctaatgcatggtcgtttcaccccccccaccccccacaaaaaaaaaaaaatctgccagcaattactgattgtcgatgctattttgcattatctattcttctctggttccatctctctccaatgaatttataggtgatgtcaatgcataacacccatataaatgctcatcagttgggaatttttattctttgtgcagtagtacttcctctccttgattcttctgtaaagagaaaggctgctgagattgatggagaaaaggtgcaaatagagaagtatgtaccttttgataagtcttgtatttctcttcttgtttcatagaatcatagatatgaagcgacatttgttgctggaaattaagtatctcctttgctatgtttaagtcttgtctttgtctcatagggccaaattgaagatgccaaagacagaggatgtaccaagtgatcaaaataatgctaatcaagtgaatgaacaaatatgctttaaaactgtgtaagtgtacattctagaatcctgaaaattcgaatgacttgtgtttatactttgttggtaatcctctttagtggaacacgtgcttatttcttaaatacaattggtactttggatgtataatgccgtgtatatttttcttgttcaatagggggtccaatgcaattgatgacgcaaagttaagtctaggtcaccagaataccctggaagatcttgacaagagtcaggagctaaatgtttcacaaacaaaagggcagaatgatgttgcagatcaaattacaaatcaagacacgcctacaatcacgtaatgaatgaagctatatatcacttcatttaccaaaatttctgtgcttcttaattttatgtaaggtagaggacttttctatattttgcaggagctctgatgaacgctacatttttactggtgctcttgaaactgatattgaacaaaaaaatcgaggggctgaaaatgaacaagttgaggtccatcgttgcccctttgaggtgcttgataatggtatcaaagtggagcatctggttgaggggaatgctaaagccaaagttgcatctaagggcaaacaggtcagcttgaacattcttacttatattattcaacctttgttttattgtaagtctattttgtctacaaatacatcacttatgcacatgttcaacttgtccttagtagggtggtaccaccttattaaggtcataagcatccttttttctccttattgttgccttctcttcaatcttaggcaacacctaggcttgccccataattttcatatgccagatccactgcccaagttaaaagaacaaacaatctaagtatctaagattgcttatgcaggtttgtgtgaggtattgtggtcggttgatcaatggtgaagttatcgaccctactaaccttgacgacgacacccatacattcaggcttggtaaaaggattgacaaatctctctctctttttccatcctttgattctttggacactgtacattttcttttggttggctgcaggtgcgggtgaagtcattcctggatgggatattggcattcttggttgttgtctttactcacgattgccactttaatcctattgtaatactttgctgttgaaatcaagtacttattctattactcttaacacaagttttatcatgttttctctataggcatgcgtgttggtggcaaaaggagactcacaatccctcctgctcaagggtaagtgtttggttcccttcgaatccctcaatattgtatttctctacgtgtttgttgcaggacatgaaaggcaatacctgattttcttggttgcatttgcttttcagctatggtgatgttgcgacaccaaagataccagcaaactcttggctcgtgtatgaagtcgagttgctggaagtgaagcgagccaaaagggcacgttga</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0103800, RefSeq:Os09g0103800