Difference between revisions of "Os09g0133600"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os09g0133600| Description = PAP fibrillin family protein| Version = NM_001069166.2 GI:297609077 GeneID:4346460| Length = 3628 bp| Definition = ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os09g0133600|
 
GeneName = Os09g0133600|

Revision as of 20:55, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0133600

Description

PAP fibrillin family protein

Version

NM_001069166.2 GI:297609077 GeneID:4346460

Length

3628 bp

Definition

Oryza sativa Japonica Group Os09g0133600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:2495806..2499433

Sequence Coding Region

2495806..2495898,2496191..2496312,2497925..2498123,2498894..2499205

Expression

GEO Profiles:Os09g0133600

Genome Context

<gbrowseImage1> name=NC_008402:2495806..2499433 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:2495806..2499433 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gtcacctactactacacacagcgacagagaggagcagagccgcaagaagagtcgagtcatggcggggtcgtcgtccctcagcacgctctccctctgcgcgcgtccagcgagacgcgcgcggaggtggtcgagctcatcacgcagctcgaggcccgcaaccccacgccggcgcccaccgaggcgctcaccctcctcaacggcaagtggatcctcgcgtacacctcattttcacagctattcccactattggggtctggtagtttgcctcagcttgtcaaggtggaagaaatatcacaaactattgattctgagaacttcacggttcagaattgcatcaagttttcaggacctttagcaacaacttcagtgtctaccaatgccaaatttgaagttcgaagtcccaaacgtgtacagatcaaatttgatgaaggcattatcggcactccacaattgactgattctattgtactacctgagaagtttgagttatttgggcagaatattgacctgaccccattgaagggcatattttcatcaattgaaaatgcagcatcctcagttgctagaaccatctctggtcaacctccactaaagataccaattaggactgacaatgctgagtcttggttgctcacaacctaccttgatgatgagcttagaatctccagaggtgatggcagcagcatctttgtactgtttaaggaaggaagcaccctcctatattaa</cdnaseq>

Protein Sequence

<aaseq>VTYYYTQRQRGAEPQEESSHGGVVVPQHALPLRASSETRAEVVE LITQLEARNPTPAPTEALTLLNGKWILAYTSFSQLFPLLGSGSLPQLVKVEEISQTID SENFTVQNCIKFSGPLATTSVSTNAKFEVRSPKRVQIKFDEGIIGTPQLTDSIVLPEK FELFGQNIDLTPLKGIFSSIENAASSVARTISGQPPLKIPIRTDNAESWLLTTYLDDE LRISRGDGSSIFVLFKEGSTLLY</aaseq>

Gene Sequence

<dnaseqindica>1..93#386..507#2120..2318#3089..3400#gtcacctactactacacacagcgacagagaggagcagagccgcaagaagagtcgagtcatggcggggtcgtcgtccctcagcacgctctccctctgcacgcagtcgccatcaccgtcaccggtggcgtccgcccgcctcgtggcaccggctgtcctcggtttcgccggggccccgcggttcccgacgctgcgggccgcgccacggcggctgacggcgcgggcggtggccggggacgccgaggacgagtgggggaaggagccggcggcggaccagggcggtgccgccgcggcggtggccgaggcgcccgcggatgtgccggtgacgagcgaggtcgcggagctcaaggcgaagctgaaggaggcgctgtacggtacggagcgcggcctgcgcgcgtccagcgagacgcgcgcggaggtggtcgagctcatcacgcagctcgaggcccgcaaccccacgccggcgcccaccgaggcgctcaccctcctcaacggcaagtggatcctcgcgtaagcccttctcacttttcccctctcgctccatttcttatttatattactacatatatttacatgttctttgttatatttttagtttgacttaaattggtgatgaatcgatctaattggtgtggttactagagggaaaattgttgctcacgtgctttatttttgtcattttgtgtttgttaatccaaatgtataatttcgtaggtatgcatagttaagagagtgttgtgacttgattacatatcattctacaaatcgctttaattaaatgttcgggtttacagggtgatccttgatttccatagtctgttttaagtaatgctgaaatcagatttacagaacggctcttcttttgctagcttatttgtttgaatcattttatcacccttgtaaaggtaccaagagatgctactaattctgtatcccttagactctgtttgttttttttttttttgacggaagaaggtagagcaggctctacataaagtcatttcattaatagaaatgaggtttacagattactccttccgtcccaaaaaaaggcaaaccgtgggtttccgtgccaacgtttgactgtccgtcttatatgaattttttttataattagtattttcattattgttagatgataaaacatgattaatactttatgcgtgactcatctttttaatttttttcataattttttcaaataagacggacggtcaaacgttgggcacggaaaccagggtttgtctttttttgggacggagggagtacatattaggtgtgggaattaacagagagggaaataaacagaaaaagaaaggggagaggggagaacaagccaaaaaaagaaaaaagggagaatttacacatatatgtacatgaagctttcttctaggaaagccttgagcaccaggaatgaattttttgcctatttgtttcattggtccttaggctccagagctgtatggtgtctgaaacttgttgaatgcattgtagactgtcaaactgtctttcgaacacccggttgttgtgtgctttccatagagtgtacgctcaagcagcaaaccaaattggctcaattcctttcaatgtttgatttctgtccataattgcctggaggaaggctgagatagaatctgagctgttggccagctgtagtaagttcaatttttcccaaaggctattggcctgtctgcaccttaagatgatgtgatcagctgtttctagtgcagggcacaaagagcagtgggggtctttgttccattttttgttgactctgtttgttataacttataagaaccaaacatctgctagcttggataacctttgcgttgatctcaacctaaattgctaagggaggagagtcttttaaagaccgttttatgcacaagctgtaatgaaaacagggtattcaggtacctgttgctatcatttacttgagaaaaggacaattgtgattggttcagttctttggacactcacatggtcaaatgatctcaacatcataagtaacgtattaaaccaatgactaggatgttgagaagtctaagaggtcacaattcctattaaatgtagttgcagagtcactgaatagtttggagactaataaattaggtgactacaggtacacctcattttcacagctattcccactattggggtctggtagtttgcctcagcttgtcaaggtggaagaaatatcacaaactattgattctgagaacttcacggttcagaattgcatcaagttttcaggacctttagcaacaacttcagtgtctaccaatgccaaatttgaagttcgaagtcccaaacgtgtacaggtgtgattttcctctctcaatcatgtatttcattttctcatgaaaccattctgtgatccattgatatgtgcaaaggtgttaggttttttatggatatctgggaaaagcgtgagcatgaaattttactttaaaacaatttggatagtatgagatttacacttttaagtacagcagcctttatatctcataaaggagaagatttcaggaaattttcggtactgaagttctttgtggagcatttcccataaagttaattgattgcatgcaatcattacattttgaaatatccgttgaagatatggagaaaagcacagatttggatgagttcacaactgctagggcatgcacaaatctgtccatgttgtgaactgtgggatattatttttactgctacatgtatatggatatggaagtgaaacatgtattaactattaactattttagattgttgctattgctgttcccggatctacctaattagttactccctctgtcccaaaatatagcaagttttgaacggattggacatatcctaggactacgaatctggacagacccctttcaaattcgtagtcctaagatatgtcccatccgttcaaaacttgtaatattttgggacaaaggaagtatgtaatatgaagaggtttggtaacaaggggtgggaaagaaaacccttccatttatgttttttctacagtatttatttgcatatgtcaactgaactttgttataggtttctgcaaaactcacatagtttgcaaccctttcagatcaaatttgatgaaggcattatcggcactccacaattgactgattctattgtactacctgagaagtttgagttatttgggcagaatattgacctgaccccattgaagggcatattttcatcaattgaaaatgcagcatcctcagttgctagaaccatctctggtcaacctccactaaagataccaattaggactgacaatgctgagtcttggttgctcacaacctaccttgatgatgagcttagaatctccagaggtgatggcagcagcatctttgtactgtttaaggaaggaagcaccctcctatattaagcttggcatgcctaatctagggtagaacttgatgctgaagcaactccaagcagtacttgtggctaaattatttttcatatttaagttggtgtgttgttatttgtgtttgtatagttcgggcgtttggattatgtgaagttttgtgtatgtgtaatgtattctttgatgtccctgagcacctgagctgctatactagtatacatgttatatattgcaaaagttacactg</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0133600, RefSeq:Os09g0133600