Difference between revisions of "Os09g0244000"
(Created page with "{{JaponicaGene|
GeneName = Os09g0244000|
Description = Reverse transcriptase, RNA-dependent DNA polymerase family protein|
Version = NM_001069188.2 GI:297609093 GeneID:4346...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os09g0244000| | GeneName = Os09g0244000| | ||
Revision as of 20:55, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os09g0244000 |
|---|---|
| Description |
Reverse transcriptase, RNA-dependent DNA polymerase family protein |
| Version |
NM_001069188.2 GI:297609093 GeneID:4346485 |
| Length |
6999 bp |
| Definition |
Oryza sativa Japonica Group Os09g0244000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 9:3890924..3897922 |
| Sequence Coding Region |
3890924..3891954,3892367..3892750,3892863..3892908,3894754..3894834,3894913..3894993 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008402:3890924..3897922 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008402:3890924..3897922 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcgagggggccaagacgtctacggaagttgaacctagatgcacagagcgcaggacatgtgcaagctgaagaagaaaatttgctgtacaactttgaagctctagatgaagcagatgcacaattcaatgacgataatttgcatctcgaagctcaagatgcagggaatgtacaacccacagaagataggccaaatggggaggtacgacgggttctaggaaattttaatgtaaaaaacttggaccaactgaagcaaggaaaggtaattgtagagacggatgaacatggtattccaaatgatagatcaggttctgttctaggctcgtatcttggtaagcttgcacagaattcaacatttgcaccattggacattccaaaatgggaccatgacttatttgtgggaccaaaggagagcatagtcgctgacgtggagttattcatggtaaagatgaaatttgtgtacccttctgagacgaagcagcttacaagagactggattctaatgaaagctgataaagggtggagatcttacaaaagccgtttaaagggaagatactttaatcctgatgtgaggactctaaacgatatattaaaatatgtcccaaaaggtgtcaatggatatcaatggcgtggtcttgttaaaatatggtgtcaggataaacacaagaaattatgtgagaaaaactctgaaagcgcaaaacagcagaggaatccacatacaactggtagaaaaagccatgctaggctttgtaaagagatggaagcaaaagttaaagggaaggtccatgacattgacgtatgggatgaagcacataagaaaaaggatgagcgcattaaggcagtagtggaatcggcttaccatgaattagctaaaaagaaatctactagttgcagtggtctttcatccaaagattatgatgaagtttttcgacgtgtagttggaaaagagacaaaacttcgagggtactacgatcataagaattggagccaaataagggtttctcaaggactagatgttgttggacaatctgaggaatatgcaatgcttaagttacaaatgaatgcaatggaaaataaaatagaggctatgagtgttgatatgactctgatgcgtgccttcatagaacaaaaattccctggagaggattggagaaatattgtggttgcagaacaaaataaagaagttgatatttctgaacaagttggtaatgatatccaacatgaatccaatgttgaagaatcatgtgaacatgtacattctacaccagataatgtgcaggtgcagaagcatttaatcagttatattcctgctaaaaatggttgccacaaaccatctgtaccacatgaacacatgattgccaagcaatcaagcattggaagctttgctagaaggtctgaagctagtcagagatacatggaatcaactatggcacatgaccatggaactgataaggttgatatgtttgatcaagttgacattgactgtacaaatgaatttgataataactttgataattcatttgccaatacctatgctaagtcaaatcatgtgcaacaagtacattctattagttctgctaatggcaatggtcgtcgtttcaatccatctataccatatgaatgcacaaatgctaagcaactaagtggggaaagcttaggcaaaaggtccataacaagtcaaatgaatgtggaatcaatggtgccacgtgagaatgtgaccaatgaggcttatgtttctgaacaagatggtactgatattatgaatgggtttgttcacaaccgtgaggaaccacatgccaatgagaatgctataccaaataatgtgcagcaattatgttctgttagttcaactagagctaaagagaattgttctactaaagctttgccatctgaccacataactgcaaagcaatcaatcattaaaagctctgtcaaaaggactagaactaactgtgtggattcaattttaccacctgataaagccaaacaggatcgtcgaagcggggctgtgattgggactggtcatcgccgtaaagccaatcctgatacttctgttcctaacatgacaccttctcttgatgaattatctacacccactcctgctccatcaccaccactccctatatcacctttcccacatgtatacactcgtcccacacaacccagagagcatctatctactcctacctcctcggcaagtcctgacacccttgtttttgatgaatctaacactattgatgagtcacaggttggtcctaaatgtaatctacgagatcgaactactattgcagctcctgaccgattgggttttcctcatgtgagtgttgtcattccagagccatccacctaccagcaatcttctactattccagaatggcagcttgctatgtctgaggagctcgttgctcttgatcgtatagcggctgggttttcaccaagtgaacatgatcctgctttgtttattcatctctctccacgtggacgtactttgcttctcctatatgttgatgacatgttgattacgggcgatgatgttgaccacatttctcatgtgaagaggcaccttaatgagcaatttcaaatgactgatctgggtccccttagttacttcttgggaattgaggttttgcattcagcaaagggatattatctctctcaatccaaatacatacaagatcttattgtgcgttctggcattactgataataggacagttgcaacacctatggaccttcacttgcaacttcgtggtactgatggtacacctcttgaggatccttctcattatcatcatatagtaggcagccttgtttaccttaccgttactagacttgatattgctcatgccgtccatattttgagtcagtttgtgagtgctcctacttcagttcattttggacatttgcttcgtgtgctgcgatacttaaggggaatatcatctcagtgtttgttctatgctcgtgatagtccgcttcagctgcatgcttactcagactccacttgggcgagtgacccaacggatcgtcgttctgttacaggttattgcattcttcttggctcttcccctcttgcatggaaatccaagaagcaggcggttgtatctcgctctagtacagaggcaaaacttcaagcccttgccactaccacgtctgaaattgtatggcttcgatggttgttagttgactttggtattgtctgtggtgcccccacacctcttctttgtactggagccatacagattgctaatgatcctgtgaagcatgaacttacaaagcatattggtgttgatgcatccttcacccgatctcattgttatcagaaaacaattgctctccagtatgtgccctcagaactgcaagtcgcggactttttctctaaagcacaaactcgtgagcagcatcgtcttcacttgctcaaactcagtgctttagatcctctacttccgccttga</cdnaseq> |
| Protein Sequence |
<aaseq>MARGPRRLRKLNLDAQSAGHVQAEEENLLYNFEALDEADAQFND DNLHLEAQDAGNVQPTEDRPNGEVRRVLGNFNVKNLDQLKQGKVIVETDEHGIPNDRS GSVLGSYLGKLAQNSTFAPLDIPKWDHDLFVGPKESIVADVELFMVKMKFVYPSETKQ LTRDWILMKADKGWRSYKSRLKGRYFNPDVRTLNDILKYVPKGVNGYQWRGLVKIWCQ DKHKKLCEKNSESAKQQRNPHTTGRKSHARLCKEMEAKVKGKVHDIDVWDEAHKKKDE RIKAVVESAYHELAKKKSTSCSGLSSKDYDEVFRRVVGKETKLRGYYDHKNWSQIRVS QGLDVVGQSEEYAMLKLQMNAMENKIEAMSVDMTLMRAFIEQKFPGEDWRNIVVAEQN KEVDISEQVGNDIQHESNVEESCEHVHSTPDNVQVQKHLISYIPAKNGCHKPSVPHEH MIAKQSSIGSFARRSEASQRYMESTMAHDHGTDKVDMFDQVDIDCTNEFDNNFDNSFA NTYAKSNHVQQVHSISSANGNGRRFNPSIPYECTNAKQLSGESLGKRSITSQMNVESM VPRENVTNEAYVSEQDGTDIMNGFVHNREEPHANENAIPNNVQQLCSVSSTRAKENCS TKALPSDHITAKQSIIKSSVKRTRTNCVDSILPPDKAKQDRRSGAVIGTGHRRKANPD TSVPNMTPSLDELSTPTPAPSPPLPISPFPHVYTRPTQPREHLSTPTSSASPDTLVFD ESNTIDESQVGPKCNLRDRTTIAAPDRLGFPHVSVVIPEPSTYQQSSTIPEWQLAMSE ELVALDRIAAGFSPSEHDPALFIHLSPRGRTLLLLYVDDMLITGDDVDHISHVKRHLN EQFQMTDLGPLSYFLGIEVLHSAKGYYLSQSKYIQDLIVRSGITDNRTVATPMDLHLQ LRGTDGTPLEDPSHYHHIVGSLVYLTVTRLDIAHAVHILSQFVSAPTSVHFGHLLRVL RYLRGISSQCLFYARDSPLQLHAYSDSTWASDPTDRRSVTGYCILLGSSPLAWKSKKQ AVVSRSSTEAKLQALATTTSEIVWLRWLLVDFGIVCGAPTPLLCTGAIQIANDPVKHE LTKHIGVDASFTRSHCYQKTIALQYVPSELQVADFFSKAQTREQHRLHLLKLSALDPL LPP</aaseq> |
| Gene Sequence |
<dnaseqindica>5969..6999#5173..5556#5015..5060#3089..3169#2930..3010#2754..2855#2586..2675#2423..2503#2246..2347#2081..2170#1920..2000#1746..1844#1313..1648#1140..1226#958..1050#639..872#335..579#1..187#atggcgagggggccaagacgtctacggaagttgaacctagatgcacagagcgcaggacatgtgcaagctgaagaagaaaatttgctgtacaactttgaagctctagatgaagcagatgcacaattcaatgacgataatttgcatctcgaagctcaagatgcagggaatgtacaacccacagaagatagtgagcaagacctttcagagaatgatgacataatcacggagttgcctcttgcagccaaaagaccaattaatataatctgttcttcctatatatgtctatatatatgatttttcctatcacccatagctgaactgttcctaaatgtagggccaaatggggaggtacgacgggttctaggaaattttaatgtaaaaaacttggaccaactgaagcaaggaaaggtaattgtagagacggatgaacatggtattccaaatgatagatcaggttctgttctaggctcgtatcttggtaagcttgcacagaattcaacatttgcaccattggacattccaaaatgggaccatgacttatttgtgggaccaaaggagagcatagtcgctgacgtggaggtgaatttttaattaatgtaaacaaatattatcatgcttatttcagatctaacttttagttattcatggtaaagatgaaatttgtgtacccttctgagacgaagcagcttacaagagactggattctaatgaaagctgataaagggtggagatcttacaaaagccgtttaaagggaagatactttaatcctgatgtgaggactctaaacgatatattaaaatatgtcccaaaaggtgtcaatggatatcaatggcgtggtcttgttaaaatatggtgtcaggataaacacaaggtgacctctccattttaatgctaaacatacagtccaaattttgtttcctaatcatctgtatttagtacagcttctctattttcagaaattatgtgagaaaaactctgaaagcgcaaaacagcagaggaatccacatacaactggtagaaaaagccatgctaggctttgtaaagagatggtaattattttggacttaaatgttattgttacatatctatagctttctaatgctaaatttgatctatcttctgattctttgttgcctaggaagcaaaagttaaagggaaggtccatgacattgacgtatgggatgaagcacataagaaaaaggatgagcgcattaaggcagtagtggtaaatttctttccttgttagttgttatcacaaatgtagtttggttcatttatgataaactaattcatgcatgtttaattatgtaggaatcggcttaccatgaattagctaaaaagaaatctactagttgcagtggtctttcatccaaagattatgatgaagtttttcgacgtgtagttggaaaagagacaaaacttcgagggtactacgatcataagaattggagccaaataagggtttctcaaggactagatgttgttggacaatctgaggaatatgcaatgcttaagttacaaatgaatgcaatggaaaataaaatagaggctatgagtgttgatatgactctgatgcgtgccttcatagaacaaaaattccctggagaggattggagaaatattgtggttgcagaacaaaataaagaagtaagtgtcactgtacaccatcttcccctgtctaaagatcaattaacgaatacactatgtgatcagtacatatgcatggattatgctttttttgcaggttgatatttctgaacaagttggtaatgatatccaacatgaatccaatgttgaagaatcatgtgaacatgtacattctacaccagataatgtgcaggtggtacaatatttacttgataatttttaaattgatgcttttgtaagtctttataatgttgtttttcataagttgcagcagaagcatttaatcagttatattcctgctaaaaatggttgccacaaaccatctgtaccacatgaacacatgattgccaaggtaacttatgcaaatctcactatgctcaccatatgcattttttacattatatatataattaaattggccttcaattgtagcaatcaagcattggaagctttgctagaaggtctgaagctagtcagagatacatggaatcaactatggcacatgaccatggaactgataaggtatacaaactaagcatgcacaaagattgaaaagattgatacaagtagaaggtctgagttattttttggttacaggttgatatgtttgatcaagttgacattgactgtacaaatgaatttgataataactttgataattcatttgccaatacctatgctaagtcaaatcatgtgcaagtgcggtgtttacttgaaaagttttaattgaggctttcacaatttctaaatattgacatttatcataagttgcagcaagtacattctattagttctgctaatggcaatggtcgtcgtttcaatccatctataccatatgaatgcacaaatgctaaggtgacttaggaaaatctcactacataatgagttctgcttgatttaaacaacaatacctaattttaatgaatttcaattacagcaactaagtggggaaagcttaggcaaaaggtccataacaagtcaaatgaatgtggaatcaatggtgccacgtgagaatgtgaccaatgaggtatatacaactaagcacgcaaatatcaattagtaaatttatttggcaatactgtgatttgtttgattttttattcaggcttatgtttctgaacaagatggtactgatattatgaatgggtttgttcacaaccgtgaggaaccacatgccaatgagaatgctataccaaataatgtgcaggttctggaatgtctactttaaaaatgttgaatcaaagtttgccaatgtcttaattctatcatttattattacagcaattatgttctgttagttcaactagagctaaagagaattgttctactaaagctttgccatctgaccacataactgcaaaggtgtgttacagaaatcttactctattactgaaacatgtgattgttacaacatttcacaaagttgactttcaattgtagcaatcaatcattaaaagctctgtcaaaaggactagaactaactgtgtggattcaattttaccacctgataaagccaaacaggttagattcaaactattatgctcttttagttctagtattaatgctgatcaagcctgctcatccacttttgattctttaaaatttttaacacaggggcctcagagaaagggagtattagagaatacttcatctaaatcagtatgtggtttccattgtttatgataaaataaatattcatatgctcatgaatgacaatgctcctagttttgcgaatgacaatattgtgtttctcaaaatgataggatcaaagggtggtgttcttgttttcattgaatccagtatacaaaggcaaagtagtggccaagggaaatttagtgactacagatagcacatatgtggttggaggaaatatgcttggaaatgaatattatggtgtggctgttcatagtgttacaaatattggtgatgagagactgccaagaccatctgaaaactgtactacattaagagaggcaattggttttgtcattccttggcctcgtccctatgtaatattaatcatttcaactcctattataatttgtcacgttgcattttttttttgcatatatctcgttactaatataatatcttgacctttcaggtaagaaagcgtagggatacaagttctgcccagtagcaaggccctttcatacgagtgctctgctcataaccagaattttgctgttattattggtctgactataggataatgaatggaggactgaagaaaagaaagagtggaagccctgatattcaactttccttttgaagaaatattatagatttccttctagcagtttagaaaaacacgcacaacaagctgtaggatgttatatatgtgtgtgtctattgcactttagttttccagttagtcgtatatgtctatttaaaattacatggatgttttatttagttgtaaactccttgctctcatacaagcatgtacagcctttccccttttaatatattatatgttcttgtatatggtcgggaatatggtactgcctgcccatgtaattttttacatgcacatgtatatagactcaattaatatatgattaatttaatgtgcatccatatatataattatatacaatacgtactcgttacaatatactaaatgtataaaatacatactacgctatatctaaaatactgccaccgagacgcaacagaacgtcttaattaatgtgctaaaatactactactgagacgcaacagaacgtcttaatggatgcgtctatggacgttgtacattgttttttaaaagcgtctctatgcctatagaggtgatattccacgtctctaacaacgtcttaaaataaattaggtacgctttaggaaatgtctctatttttttgagacggtcgaaacgaagacgttcctatgacactttataaaagcgcctcgcttgtttgcggagacgaaacaaaacgtctctatattacaaataaaatgtcttctttgggggggttttgttgtagtgtatcgtgcccgtcgtgcttctcgtggtcgcggtgcagctcctactactagaggctctgtgtccgttcctgccacctcacctattggcgcccctcagtggctcagtcgtcttgggttcttgattccggagcttcttttcatgtgacatctgatcagtcctagttggtagcttgcaagccagttagtgacggtgcctctattcagacagctgatggtacatcttgttatatcattcatcagggttctctttgcaattctcatttttctgtacctgatgtttcttgtgttcctcagttatcaatgaatcttctttcagtcggtcaagttaccaaccaaaactactttgttggatttgatgattcatcttgttttattcaggatcgtcgaagcggggctgtgattgggactggtcatcgccgtaaaggtgctgctagcctctatattttggacaccttgcgtcttccttccgctgcgccttctgctcgtgtctttgtgtctgcctcccatttcctctggtgatgatatctctgcactagccaatcctgatacttctgttcctaacatgacaccttctcttgatgaattatctacacccactcctgctccatcaccaccactccctatatcacctttcccacatgtatacactcgtcccacacaacccagagagcatctatctactcctacctcctcggcaagtcctgacacccttgtttttgatgaatctaacactattgatgagtcacaggttggtcctaaatgtaatctacgagatcgaactactattgcagctcctgaccgattgggttttcctcatgtgagtgttgtcattccagagccatccacctaccagcaatcttctactattccagaatggcagcttgctatgtctgaggagctcgttgctcttgatcgtataggtacttgggatcttgttcctttaccttcacatgcagttcctattacagctaagtgggtatttaaaattaagactaagtcagatggttctcttgagcgatataaagcccatcttgttgctcgaggttttcagcagactcagggacaagattataatgaaacctttgcgcctgccgctcatatgaccacagttcgcactctcgttgcagtggcaggctacctcttcttggtccatctctcaaatggatgttaagaatgccttttttcatggtgatttgtatgaggaagtttatctgcagccacccccaggtgttgatgctccctcaggatatgtttatcgtctccgccatgctttatatggtcttaaacaagctcctcatgcctggtttgagcgttttgtatctgtgatacaagcggctgggttttcaccaagtgaacatgatcctgctttgtttattcatctctctccacgtggacgtactttgcttctcctatatgttgatgacatgttgattacgggcgatgatgttgaccacatttctcatgtgaagaggcaccttaatgagcaatttcaaatgactgatctgggtccccttagttacttcttgggaattgaggttttgcattcagcaaagggatattatctctctcaatccaaatacatacaagatcttattgtgcgttctggcattactgataataggacagttgcaacacctatggaccttcacttgcaacttcgtggtactgatggtacacctcttgaggatccttctcattatcatcatatagtaggcagccttgtttaccttaccgttactagacttgatattgctcatgccgtccatattttgagtcagtttgtgagtgctcctacttcagttcattttggacatttgcttcgtgtgctgcgatacttaaggggaatatcatctcagtgtttgttctatgctcgtgatagtccgcttcagctgcatgcttactcagactccacttgggcgagtgacccaacggatcgtcgttctgttacaggttattgcattcttcttggctcttcccctcttgcatggaaatccaagaagcaggcggttgtatctcgctctagtacagaggcaaaacttcaagcccttgccactaccacgtctgaaattgtatggcttcgatggttgttagttgactttggtattgtctgtggtgcccccacacctcttctttgtactggagccatacagattgctaatgatcctgtgaagcatgaacttacaaagcatattggtgttgatgcatccttcacccgatctcattgttatcagaaaacaattgctctccagtatgtgccctcagaactgcaagtcgcggactttttctctaaagcacaaactcgtgagcagcatcgtcttcacttgctcaaactcagtgctttagatcctctacttccgccttga</dnaseqindica> 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| External Link(s) |
