Difference between revisions of "Os09g0252100"

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(Created page with "{{JaponicaGene| GeneName = Os09g0252100| Description = Similar to Acetyl-CoA C-acetyltransferase| Version = NM_001069220.1 GI:115478179 GeneID:4346520| Length = 5555 bp| ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os09g0252100|
 
GeneName = Os09g0252100|

Revision as of 20:55, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0252100

Description

Similar to Acetyl-CoA C-acetyltransferase

Version

NM_001069220.1 GI:115478179 GeneID:4346520

Length

5555 bp

Definition

Oryza sativa Japonica Group Os09g0252100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:4535890..4541444

Sequence Coding Region

4535931..4535992,4536239..4536300,4536660..4536758,4536843..4537016,4537107..4537212
,4537571..4537709,4538357..4538434,4538763..4538828,4539113..4539198
,4539839..4539938,4540145..4540255,4540357..4540398,4540571..4540657
,4540913..4541002

Expression

GEO Profiles:Os09g0252100

Genome Context

<gbrowseImage1> name=NC_008402:4535890..4541444 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:4535890..4541444 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>accccctccctcctccgcctcgttcactccgccgccgccgccgccgccagatccagcagcttcaggtcggggctgaaccttggacttggagcggccatggcttcggacaacattggctcgagagatgtatgtgttgttggggttgcacgcacccctatgggtggtttcctaggtgccctgtcttccttgtcagctaccaaacttggttccatagcaattgaagctgctctgaagagggcaaatgttgatccagcccttgtgcaagaggtcttctttggtaatgtgttgagtgctaatttggggcaagctcctgcaagacaagctgctttaggtgcagggataccaaacacagttgtttgcagcgcagttaacaaagtttgcgcatctggcatgaaagcgacaatgtttgcagcacagtcaattctattgggcatcaatgatattgttgtagccggtggcatggaaagcatgtctaatgctccaaaatacattgctgaagctagaaaaggatctcgttttggacatgacactcttgttgatggcatgcttaaagatggcctttgggatgtatacggtgattttgccatgggaaattgtgctgagctttgtgctgacaatcatgctctgacaagggaagaccaggatgcctatgctattcaaagcaatgagcgtggaattgctgctcggaacagtggtgcttttgcatgggagattgttccgattgaagttcctgttgggagagggaaaccaccggtacttgttgacaaagatgagggcctggacaagtttgacccagtgaaactgaagaagctccgtcctagtttcaaggagaatggtggtactgttactgctgggaatgcttctagtataagtgacggtgctgccgcattagtattggtgagtgggcagaaggcacaagaacttggactgcaagttattgcacgaatcaaaggatttgcagatgcagctcaagctcctgaattatttaccactagcccggcacttgccatacctaaggctcttgctaatgctggcttggagtcttctcgtgttgattactatgaaattaatgaagccttttcagctgttgcacttgcaaatcaaaagcttcttggaattccttcagaaaaaattaatgtacatggaggagctgtgtctttaggacatcctcttggatgcagtggtgctcgaattttggtcaccctgcttggtgttcttagggagaaaggtggcaaaatcggagttgctggtgtttgcaatggcggaggcggagcatctgctctcgttctcgagcttgcataa</cdnaseq>

Protein Sequence

<aaseq>TPSLLRLVHSAAAAAARSSSFRSGLNLGLGAAMASDNIGSRDVC VVGVARTPMGGFLGALSSLSATKLGSIAIEAALKRANVDPALVQEVFFGNVLSANLGQ APARQAALGAGIPNTVVCSAVNKVCASGMKATMFAAQSILLGINDIVVAGGMESMSNA PKYIAEARKGSRFGHDTLVDGMLKDGLWDVYGDFAMGNCAELCADNHALTREDQDAYA IQSNERGIAARNSGAFAWEIVPIEVPVGRGKPPVLVDKDEGLDKFDPVKLKKLRPSFK ENGGTVTAGNASSISDGAAALVLVSGQKAQELGLQVIARIKGFADAAQAPELFTTSPA LAIPKALANAGLESSRVDYYEINEAFSAVALANQKLLGIPSEKINVHGGAVSLGHPLG CSGARILVTLLGVLREKGGKIGVAGVCNGGGGASALVLELA</aaseq>

Gene Sequence

<dnaseqindica>42..103#350..411#771..869#954..1127#1218..1323#1682..1820#2468..2545#2874..2939#3224..3309#3950..4049#4256..4366#4468..4509#4682..4768#5024..5113#gttttgctcctcacccgcgatctcctctcctctccgcctaaaccccctccctcctccgcctcgttcactccgccgccgccgccgccgccagatccagcagcttcaggcaagcatctctctctctctctctctctcttccaaagcagcgtccgtgcttgccatccaccgcggcgccggccggaaacctccgcctgcgattcaaaggccacaccctctctctctcccaccgcacgcacgtccgtccacgagagcaacgagaatcccaaatgcgatcacagatcccagcgttggatgtagtagctacaatctgcgtaatcagaatctgtcctaaaagggggccttacttttgcaggtcggggctgaaccttggacttggagcggccatggcttcggacaacattggctcgagaggtacgactgatctctcgctgtctcttcttctactgaacctcacttcaattattcctgaattcctgatctaatatgttgcaatgaaggattttatttgtttggtggttggcaaattcattttcatttttgtgcttttcatgcaatgtttagttgtcaaagtactaatgggaaagaataaacgggagcatgagattcaaatcttgcatctagtggctagtttcactgctctgtgtttgttcattccaccagagtttgcctttctctgcaatcagcatgtctcggtcatttaaaaaatatactccggtaaaagcactgtgatgcactgcaataataatattttttttcttccatggtgacagatgtatgtgttgttggggttgcacgcacccctatgggtggtttcctaggtgccctgtcttccttgtcagctaccaaacttggttccatagcaattgaaggtgataccagtatcttctcatatgctgtatgtgtaattgttcttttaacccaaatataactaacatcatcagtgtggtgatcagctgctctgaagagggcaaatgttgatccagcccttgtgcaagaggtcttctttggtaatgtgttgagtgctaatttggggcaagctcctgcaagacaagctgctttaggtgcagggataccaaacacagttgtttgcagcgcagttaacaaagtttgcgcatctggcatgaaaggttacagttcatgaggcagcctttctataaattctgttcaagaaattatatttacctgatcatgggcttgtttttatttcctttctgcagcgacaatgtttgcagcacagtcaattctattgggcatcaatgatattgttgtagccggtggcatggaaagcatgtctaatgctccaaaatacattgctgaagctaggtctgcaaagtgttcttttggttgtacatcctgatacagcgcacaataaaagtacaacagaaatttaattggcaaacaatagtatgcgaggaaaagtgtagtatgaaaattgaaaatatatattctaagaagattagggccttgttcttaaacgatttcatgtgcacattgctttctctgtacttctcttccactttatctgtttacatagtaaataaatgaaacataagtctactttataagtatagagcacttaaccttcactgtggtaattagacatatttctcagtttgaaatttaaaatatatgaggttcttgttttggcttatgtacagttttaatttatgtatgtttgcagaaaaggatctcgttttggacatgacactcttgttgatggcatgcttaaagatggcctttgggatgtatacggtgattttgccatgggaaattgtgctgagctttgtgctgacaatcatgctctgacaagggaagaccaggtatttttttactagtactataaataggagtaactaccttctgttgtaatattattcttacacttgtctacctgactcaaaaaaccaaaactatcttagttattgcttctggaggttcggtaacagtgaatattaaatagaagtgtgcataaacaattgttagttcttttcagaatgcagggaaatttacattccatacagattgaatttcgtatggcataaatcaatattgcttaactgcaaggagcctactcttcctataccagggattcgccataaggaattgctagggcagattatatgatgctccatatcagtaaacaaatattctagtttgcttgtttcaaaggatggtggtgaacttgttaaaaccaaattgaaaaaagtattgtaccaaaattttgtattcttgttcaccaaatacaatcattaatttcatatataggttgctcttggtaaacagcatatgtttttctgtcgcttttatttctagaggaagttgatatatcttgatgtcttaatactagagcaagaactatcacatgtcccggtgatcacattgatttgttgtaatatttctattatactttgtaatacatatatttatcattagtaacatatctgatattttaataattcttctataggatgcctatgctattcaaagcaatgagcgtggaattgctgctcggaacagtggtgcttttgcatgggagattgttccggtgatttcctgtctgccactaattttttttatttattactaaccaaatgctcattaatggcaacagatttcatataaatttaccacaattttgaattttaaaaagctgtatatatttttcaggaaaaagaacatttctaattcacagttgatcatcaatccatatgaatctatataacaaatacattattgcaaaccatgtgcacaaatgatatattatccagagaagatcatactaactcaaaagatggtgggctcacctgtcaccaccactaggttcttttatgtgacttatttattttccttattctccttgctgtaccatccagattgaagttcctgttgggagagggaaaccaccggtacttgttgacaaagatgagggcctggacaaggtacaatctatatagcaaatatggcacgataaactaagtcttgtaatttagtcaacattcacctgtagctgtaaattgcatgtttccaagcataacttggtgccttgatgcactcttcagtgtaatgtgtattggcactaggctaaaaaacacgtcagtatgcagtaggcacaatattgttggtgttctaaaagcttgccaaggaaaagatcacatttgaacatttctgtaatattttagtgccataatggtactatgtaatttgatcattatgtgcctcttagtttgacccagtgaaactgaagaagctccgtcctagtttcaaggagaatggtggtactgttactgctgggaatgcttctagtataaggtgcttgctttgacacttattttaatttatttttaagatttgtgaggtatttctgtagtacatggttttaggactacctatgttagcagaacagttgtatcatcatattaatttacacaagtatgtgtaaatatgctgaaagacttgttattccactgcagagttttgaagttttcttcttttactaggtgatgcatttgatttgttttccctgttatcctgtgtaaccaaattcaactgttgttcttctaaattgccacccctgtaatgttttttattttcttagtactgctagtcctattaaaatgaaaatggagattccttatgaataactaaatttcacctctcccttaaatgccacttttgtcccacgtcattgagacatcagtggcatctgagggatggatgaggtaaacttttcagtggtatacaagaaaccatcctaaaaaataaaatgtcgaggtctgtataaagtttatacttgcttaaggtaaattgagttccccattaatgccacttttcaactctatgctttgttcattgactgttcttatccaattggtgcgtaaaatccccagatgtgtttgtttatccagtgagagtgtgatgcttcttagctaatttgttttacatggaacagtgacggtgctgccgcattagtattggtgagtgggcagaaggcacaagaacttggactgcaagttattgcacgaatcaaaggatttgcagatgcagctcaagtaagccacagtatcacttctaatctgacttaaacaatattgtacaccctctgaggtaccttaataaaatgatatggtttgtgaatggaaataagaatctgtcatcagcggagtacttttggagtttagtacttgaatgttattctatatctgaattcctaatcaagaattctattgttaacgcagctatcaattttgttatgcaggctcctgaattatttaccactagcccggcacttgccatacctaaggctcttgctaatgctggcttggagtcttctcgtgttgattactatgaaattaatgaagccttttcagtatgattgatcatctgtattcaacttattagtttttttttttgtaatcataatttgttccaaaaattctaatggtatttatttttgacttatcaatacaggctgttgcacttgcaaatcaaaagcttcttggaattccttcagtaagctgccttagttcaactataattatttctggaactaattgttttttaaattgttcttggaaattgcatttaagttcccttcactatttgaaattcgctggcaatctttagtgtggcccaatatttatgtattagttccttaatactctgctggtatttgctcctgtaggaaaaaattaatgtacatggaggagctgtgtctttaggacatcctcttggatgcagtggtgctcgaattttggtcaccctgcttggtgtaagttttaccttgagatgtccttttgttctatgattttctctctgttttcctatgattttatgagattctgctgttcaggacacctcatccatgttcttttaattgtactgttatattcctttccttttatctagtcggtatccttactctcttcagatattctcagttgtaattctttttggacattgcatctataatacatatttctcatagtccctgatataaatgaacttaatattgtcgtttgaataggttcttagggagaaaggtggcaaaatcggagttgctggtgtttgcaatggcggaggcggagcatctgctctcgttctcgagcttgcataagaagccttgtaaggcgcaatacatctttcttttctactcgagaaatagcttactgagacctgtcatttttgggtcaggtgctaactggtaacagtgacattgcaggtgatccatctccagttctccaggacgtttgtgtactctagtttatttgattttctgctttagctgtttggacattcttttatcttaataattgggtaataaagtgtgtttgtggtgccaaagttaatctggtttgtactttttgtcaaaatatttctcctgtaagtggtaataatgtggtatgcagcagtctttaggctcaatcaattgtctatagaagttctagattcttttttctgctacacaactggtaacgctcaaatgaagcttttgtgttagccagcacatttttagtggactatatctatcgagaggcctatctacacaggaattatgg</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0252100, RefSeq:Os09g0252100