Difference between revisions of "Os09g0286400"

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(Created page with "{{JaponicaGene| GeneName = Os09g0286400| Description = Sodium/hydrogen exchanger subfamily protein| Version = NM_001069315.1 GI:115478369 GeneID:4346626| Length = 9242 bp|...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os09g0286400|
 
GeneName = Os09g0286400|

Revision as of 20:56, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0286400

Description

Sodium/hydrogen exchanger subfamily protein

Version

NM_001069315.1 GI:115478369 GeneID:4346626

Length

9242 bp

Definition

Oryza sativa Japonica Group Os09g0286400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:6940039..6949280

Sequence Coding Region

6940462..6940505,6940711..6940793,6940877..6940974,6941284..6941361,6941791..6941900
,6941983..6942080,6942821..6942840,6942938..6943013,6943099..6943196
,6943303..6943363,6943438..6943485,6943588..6943619,6944078..6944106
,6944590..6944687,6944760..6944779,6944867..6944929,6946421..6946532
,6946611..6946696,6946772..6946796,6946893..6946952,6947142..6947193
,6948934..6949150

Expression

GEO Profiles:Os09g0286400

Genome Context

<gbrowseImage1> name=NC_008402:6940039..6949280 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:6940039..6949280 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgctggagctgagcctggtgtccgcttcgccccctggtgggctggcggcgagcccgcccccgcccgccgccatcccggggaaggagcagcaggtggccggggtggggatcctgctgcagatctccatgctcgtgctctccttcgtgctcggccacgtcctccgccgccaccggttctactacctccccgaggccagcgcgtctctcctcatcggtctagttgtcggtgggcttgctaatatttcaaatacagagaccaacactaggatgtggttcaacttccatgacgaatttttcttcttgttcttattgcctccaataatattccaatcaggattcagtctatccccaaaaccattctttgcaaattttggggctattgtaacttttgccatccttgggacattcattgcttctgttgtaacaggagttctcgtctatcttggtgggttgacatttctaatgtacaaacttccatttgttgagtgcctcatgttcggtgctcttatatctgcaactgatcctgtcactgtgttatcaatattccaggagctgggcactgatgttaacttgtatgctcttgtgtttggagaatctgttctaaatgatgcgatggcgatttcgctttacaggacaatgtcattggtcagaagtcaagcagcagctggggagaacttctttatgatggttttccagttccttgagacctttgttggttcattgtcatcaggtgttggagttggatttatctctgctcttctgtttaagtatgctggactggatattgacaatcttcaaaacttggagtgctgcctttttgttctcttcccatacttctcgtatatgttagcagaaggacttgggttgtcaggaattgtttccatactattcacaggaatggttatgaagcactatacattttccaatctctcaaacaactctcagcgcttcgtttctgccttctttcacttgctgtcatctttagcagaaacatttgtgttcatttatatgggctttgatattgccatggaagaacatagctggtctcatgtgggcttcatattcttctcaattatatttataatcattgcaagggcagtaaatgtcttttcttgtgcatatttggttaacatgtcacggccagaacatcgacgcatacctctaaagcatcagaaagcactttggtttagtgggcttagaggggccatggcttttgcacttgctctccaatctgccaatgaacttcctggaggacatggaaaaacaatattcacaaccaccacagctattgttgttttaacggtacttcttatcggaggatcgacgggcaccatgctggaagctttggatgtaattggtgatgaaaacagatcaatagaaaattatgacgacaacaatggttacatccccccaacgtatgaggaaggttcatcatctggaggaggattaagaatgaaactgaaggaattccacaaaagcacgacatcgttcactgcccttgacaggaactatctgactccatttttcaccagtcaaactgatgaggatgatgatgtcttcggtgaacaaccccaaaaccagagacgcggattctatgaccaatag</cdnaseq>

Protein Sequence

<aaseq>MALELSLVSASPPGGLAASPPPPAAIPGKEQQVAGVGILLQISM LVLSFVLGHVLRRHRFYYLPEASASLLIGLVVGGLANISNTETNTRMWFNFHDEFFFL FLLPPIIFQSGFSLSPKPFFANFGAIVTFAILGTFIASVVTGVLVYLGGLTFLMYKLP FVECLMFGALISATDPVTVLSIFQELGTDVNLYALVFGESVLNDAMAISLYRTMSLVR SQAAAGENFFMMVFQFLETFVGSLSSGVGVGFISALLFKYAGLDIDNLQNLECCLFVL FPYFSYMLAEGLGLSGIVSILFTGMVMKHYTFSNLSNNSQRFVSAFFHLLSSLAETFV FIYMGFDIAMEEHSWSHVGFIFFSIIFIIIARAVNVFSCAYLVNMSRPEHRRIPLKHQ KALWFSGLRGAMAFALALQSANELPGGHGKTIFTTTTAIVVLTVLLIGGSTGTMLEAL DVIGDENRSIENYDDNNGYIPPTYEEGSSSGGGLRMKLKEFHKSTTSFTALDRNYLTP FFTSQTDEDDDVFGEQPQNQRRGFYDQ</aaseq>

Gene Sequence

<dnaseqindica>8776..8819#8488..8570#8307..8404#7920..7997#7381..7490#7201..7298#6441..6460#6268..6343#6085..6182#5918..5978#5796..5843#5662..5693#5175..5203#4594..4691#4502..4521#4352..4414#2749..2860#2585..2670#2485..2509#2329..2388#2088..2139#131..347#gctttcccccccgcgagccttctggaagaagcacgcatcgattgaccgcgaccgacctcgccgccggcgaccgtacggattccgcccctccccgccgcggcggcggcaccaccggggcgcgcgcgccgggatggcgctggagctgagcctggtgtccgcttcgccccctggtgggctggcggcgagcccgcccccgcccgccgccatcccggggaaggagcagcaggtggccggggtggggatcctgctgcagatctccatgctcgtgctctccttcgtgctcggccacgtcctccgccgccaccggttctactacctccccgaggccagcgcgtctctcctcatcggtacgtacgcgcgctacgaattgatcgtgcgagtcgcaaaccctagctgtcaaggatcgtttcgtttatagagtttggattagtttgttgaggtgattattggtttgtgggatttagaaattagaagtgggatgttcagatggagatggtatggggattgatgcatgtttccgatgccctgcaaatactgtgaagggttggaattcagtgccattctaggtgaaatgcgaaaatgagccgggatcatgctaataatgtagataattcattttgtctgcctttgcctctgtggtagcttttctacaagaaacttaattctagatgaaattttcagcgaaatgagaagggatcatactattaatgcagatgattcatttaggagatgctgcatggtagcacttaatttgtctacctttgtaccccatttattgggatacacaattctttcgagccatggcatcataatattaggtcccgtttgtttccactacaaagagtggataaagttttggatattcgtggcacgcttttcaaactgctaaacggtgcgtttcgtgcgaaaactttctatatgaaggttgctctaaaatattagattaatatatttttcaagtttgtaataattaaaacttaattaatcatacgttaataccacctcgttttgggtaaaatacttagtcttcatctttatctttatcttgaggagaaaagaacaccaccttactaaagttaacactaactagctagattctatggcatagggcgtcacagcatgagtaattttttaaagaaaaagatcaccgataatatgttctgagtttatcacagaaacaagttgatgatatgataattttatattaaaaaatagagctgtatcaatgagaccgtggaaagatagaacctcaagtaaaaagggaacgtaaagaatggatcaacaccatttccttgtatggtcataagctggtagaaggaatagaagaaatggataaatcatacgtttcgactagaataatggcagttttttgttggcttatttctgttttttggttgagtttaatgccatttaagtaatgccatgaatgggaatgcaaattatatataaaaaataaaaatcaatacatagatttaaggacctcccctcaaatgtacatggcgctgtaagttttcctttgcttgatttttttatgtagttaatttggggtaggaactagttccatggtttctgttttaccttgttcccctcatatggagaaattgcatgacctgtcatccatttgtgttaccctgcaagtttcaagtctggaaaagagaaatttaaatgaaaatttgttgaattttcttattccgcttgccttgttgttactcatgggaaactcaacagtagggtcaatattaaagtcataaatgatacatgagtaaaaacatatgttcttaataacaaaccattttcaagtataaatgctcgatttgcatgccttgattagtagtagctatcctttgatcaaggtgaacaactacaatccatgttctgcttgcatagaagctgagctgatgcaaatcaagctcagttacatgagtaaaaacttcatcatgaaaataagttgagttctctagttcttttgtattttcttaaatttgtcatatgatttcctttatgacagactcgcgatatcaatatcattttgatcatgcatattgtggacaccctttatgtatggaactttaatgattctgttacaggtctagttgtcggtgggcttgctaatatttcaaatacagagaccaacactaggtttgtgttgttttattaacatttatacacaatgcaagagtatttttcacatgatgtagacatatgctatgcaagatttgggagttatttcattcccgtatcatgcttattattatcaggaattcaggatcttatgcatgctgtatgtatgctttccattgattctatcttgtttccttcaatgtgcaggatgtggttcaacttccatgacgaatttttcttcttgttcttattgcctccaataatattatatccttttgattttcaaattcaaacttaatttcttatactgttctaaaagatgcttcataatatctgaatacgttttccttgacttcatagaacccaatcaggattcagtctatccccagtaagtacctcatgatggcaataattcaaattgtctagacttctttccttgaaataataatatatttttttacagaaaccattctttgcaaattttggggctattgtaacttttgccatccttgggacattcattgcttctgttgtaacaggagttctcgtgtaagaatttcacaaactttttgttctaattctgtctgaagtattttatcttactagtcaacctctatcatactgcagctatcttggtgggttgacatttctaatgtacaaacttccatttgttgagtgcctcatgttcggtgctcttatatctgcaactgatcctgtcactgtgttatcaatattccaggtgcttatttttttcacgtatctcgttcttggacatgtgtacttataattcacgtaactgccttgcatggctagaaggtgattaggatatcatatagatatagattgggaagaaaactttgtatgagatgcttaaatttttcatgcacgaaactgcacacatacacatacacactttaccaatatgagtaaacctcttatctcaggaaacctatcctaaaccatgtactacatctatagggaaacatgcctaactagcaagatgactaaggtaccgtttgaattagcaaatccatcatttgattttcagcttataataagccactgctaaatttgatttttaaaacttaattttggagttgattttggggtttcttcatcatgttttatttttgagcattggcttttaaactacgaataacacagatataaacggtttacacataatttcttttgggttgcttctatgccgttttatggcttatcagatataggccaaacaataagactgtagatgattggtggatgaaagctgctggatgatttacttgaatatagggataaaataaatattatatatcgtaaactgaacaaatagcttataacaagtggtccaaggaagcaatgcagtagaagattttttttttttttgagaaaacatagttttagaagcgtggagcaaataatccggtggatagtctgaaaagaacagggcctaagtattaatgcaccagcagggctaggaaacagcacatattgatacactcttgtgaacagatttttgtttgaacttcgctgttgcattatgatttctatattacatgatgttgtctaatacaaaaagaaaattttaatgaggttgtaagcagtcaataaatcagaagttgtctctgttgtttgatgttttaaaattgttgtgttctcattcttgaaagacgcatcatcttcatttctttatattgctactagtgaagcataccatagactctcagtactatacatggaaccccacttttagaggcaaatgattgtttatgtaagtaaatgtaaaatagaaacctggttgcaatgctaaatgaatatgaaacattctgaaagcaaatattatcctaatgcccaggtaattgataaaaaatgtgctaaactcgtaacactgttttgttgtagtttcagtgttgtaccatatttttggtagcatttggcttgaacttgaaaacagatcattactactagattttgatgcaccatcagaatttacaacagaagtttgtggtggtaaagttactgtatatttagtgtaacatactgaatcagtgcatgcagccattattattattttttatgtactttgatatatgtccttagccaatgttttttttaaagatgttccattgtttaaatatggcatattaaaaaatgttggaggattagtggccatatggatgttgggaatctgaactaatgatgcatctcctgaaattattccatgcaggagctgggcactgatgttaacttgtatgctcttgtgtttggagaatctgttctaaatgatgcggtttgtttttacttctttcgagtgcatgcaatagtagtaattacttttgtttatgactaacatgcatatcttatttggatagtgcagatggcgatttcgctttacaggtctgtctctttcaattacatataattcttttgacatatgcatttcttgcttatatctatccttttgttcaggacaatgtcattggtcagaagtcaagcagcagctggggagaacttctttatgatggttttccagttccttgagacctttgttggttcattgtcatcaggttgcatcacagctcagaatattctcaactatttcaaagggacctttggcattgtggttgccttctaaaattggttctgtttgatgcaagctaatgaacatcatatattttagagcaatataagaattattttactagaataggtaaaaacaatgttttaatgtatggtacataacagcacagcagggcacagtattaatggctggatcttatataatatgctaccccttcatgttagcaaaaatgctctagcaagtttagtcataaacgttctcccttttgaggaactagactctgatgatcaaataccaaaatttagttttataccgtagatgcccggaaaatatgtacctgcttttactcggggttgaaattttctggacaacgatatattctccatcactaattcgaactgatctagtccctttcatagtcattgtcaattcattagctcatgtaaccattccatttgtcggattgcaggtgttggagttggatttatctctgctcttatatccttttcctaagttctacatggaaactctgtttgcaaaacatgaaagactatgcatgcttagtattgaccagtgtgtgtttaatcttatcttcatataccaattcaaaatcttcctctttaaacaactttcacaagaaatgttcttctcttagattagcagcaacaaagaaaacatggtagaatctaaattgcaatattcattttcttcttatggtcatgttttccattgctcttattgaatgttagctaaatcttcatatgctttttagtggcagttgtgttatcagtccttggctccttatagctttgtgtaaaatgcattatttttttctttgtaatagtgttaaattgcaatatttatgtattactatttaccatttactcattgcttgttttacggtaaattattttatttactacttgatcttgtgcaaccttgaccactctgtgtacctgtttaagtatgctggactggatattgacaagtaagtcatatcatgctacctgcttttagttcatagactttttcatgatttcatacgaaatatgttgccagtctaagcctgctgaattgttaacggtttcagtcttcaaaacttggagtgctgcctttttgttctcttcccatacttctcgtaaggacacttaaatacttcactctacccttcttctatactttttttattaaaatatttcgtatcaattctaggtatatgttagcagaaggacttgggttgtcaggaattgtttccatactattcacaggaatggtaagtacaatatgcaatattgcaaaatagcatattatatgaaaaaccatatctgcacaccatggctatgtctcttggaatcatacttgctatttttttttctcaggttatgaagcactatacattttccaatctctcaaacaactctcagcgcttcgtttctgccttctttcacttgctgtcatctttagcagaaacatttgtgtaagctcaggagctttgtttgagtaatataaaaacaaccattcccttttgctcttaatggacaattcctgaattcatttttcaggttcatttatatgggctttgatattgccatggaagaacatagctggtctcatgtgggcttcatattcttctcaattgtatccttaattttgtttttcattttcctaaatcgccagttttggccttttctctgtttggtagaaaattggttccttgacttactgaacaacacagatatttataatcattgcaaggtactgtcatgacttatgagccctctatgcaaatataatacttaattggcagccaaagccacagttttgtcctgatttgcaaaattatgtcttctctatagtaaaagcatgtagtagtgggatgtatatgaaagatctatcccttatttatgtgcatctatgaccattcaatacagtttagactttagagaaatgatagatgtcgcgagagcttatatcatttatctacatgcttgaatatatgactgcaataatgttagaccagatgtagaaaatctgtcccaagtgtcaaattgatcagttccaagttaagcctcagtgtaggaacagaattttcacaatttttcacttgcatttatgatgtaatttatatgtactccctcctattttaaattacttgtggttctaggtttttcctaagtcaaacattctaagctttgatcgtccatttctatacacttgtatagtttaacatcataagctttactccctccatcccaaaatatgttgacttttagctggcaagaagttgctatattttgggacggcggtagtatatttttagattcaccctgagaaatatacggatttctaaaaattaatggtcaaagattgacatgtttgacttaggacaaacctagaacgataattaatttgaaacagagggagtattcagttttacattggttgtttctcatcttggcggtggtgtttaactttatacattatttactctgcagggcagtaaatgtcttttcttgtgcatatttggttaacatgtcacggccagaacatcgacgcatacctctaaagcatcagaaagcactttggtttagtggtgagggcagatcgccattacagctggtagtttatatgattcacatttcattcaagataattgttcttatttgtacaaacagggcttagaggggccatggcttttgcacttgctctccaatctgccaatgaacttcctggaggacatggaaaaacaatattcacaaccaccacagctattgttgttttaacggtacctgcacgttttccattttctattactttgacttcaataaatggtgacactattgattggaatgctattgtttattcttacggccgtccttcagatggcatgtcatgcttgcacatatactctactagttgggtaacttctctgtgcatatggtactttcaaataggcaatttattgttgatgtggctgccttacaaaattagttccatagaccaaccaaaattttccaaaccattaggaaaatacaaggcatggaaattcaaattgctacatgcattctgtgcattttttttcctggtgttgcacgtatgggagtcctgaatcattgaactaacaatgagataatgcatcagtaggagtaggactagtgcaatattaattgaaagtaaactgaacagttctaatcaatcacctgaaacctcacaggtacttcttatcggaggatcgacgggcaccatgctggaagctttggatgtaattggtgatgaaaacagatcaatagaagtaagcgtcgttttttttttcataattctgaatggcttgtcactactctctttaagacttaagatggacctgggctacagaatactgttccaatttctagaagcaaaaatattatcatcaaaggtggctgatttggttatcttgtttccattgcccatctggttcatccaatgagactacggttgattaactgtgttattggtcattgcacgatttaggttatttggtcttgtataatttgcttgtttcttatactttaaagacaattaggagttaggactaaagacttctgtgtgacaccacttgcagaattatgacgacaacaatggttacatccccccaacgtatgaggaaggttcatcatctggaggaggattaagaatgaaactgaaggaattccacaaaaggtactacctgtcttatgtttccattcgctacacgtcataacatgaaaaaaggaaatgcttatcgccttgtaatgatcatgcagcacgacatcgttcactgcccttgacaggaactatctgactccatttttcaccagtcaaactgatgaggatgatgatgtcttcggtaagtagcttattcttttacatggtagctagcatacaagagtccgcatgatactgcaaaatgatcttatttgcctagtctgaaatgtgttgtatcgtaattgtattatcaacttaatttttactgcatgggctgcagttttttttgatcttttcccctcaattgctgagactgttcattgttgtcttcttgttttgtgatataggtgaacaaccccaaaaccagagacgcggattctatgaccaatagcttggatgagttgccacctgacagccacatacacgatacttagcatggtagcatgtgatgagattggaagcgatcgtaagtatacaacttctcatagttgaatagcatatgaaagagcataccgtaggatagatatcataacacaacttgattcgtcggcgatgacgaaagcatgctgcttcatgtatatattttaggcctcgattagtacgtggtggagctgtaatgagacaaaaatgattgtaagggaaaaaaaactgagcccaagcccatgtcatgagttagaatgattgcaataacccagagctgatcattggcagcttactgtcaagttggaaaagcatgttaaccaaatcaccagctgtgtcattggctggtcttgaagttactgatcatcattggggcttaaatcattcatgtttg</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0286400, RefSeq:Os09g0286400