Difference between revisions of "Os09g0323100"

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(Created page with "{{JaponicaGene| GeneName = Os09g0323100| Description = Zinc finger, RING-type domain containing protein| Version = NM_001069405.1 GI:115478552 GeneID:4346724| Length = 475...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os09g0323100|
 
GeneName = Os09g0323100|

Revision as of 20:57, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0323100

Description

Zinc finger, RING-type domain containing protein

Version

NM_001069405.1 GI:115478552 GeneID:4346724

Length

4750 bp

Definition

Oryza sativa Japonica Group Os09g0323100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:10010713..10015462

Sequence Coding Region

10011068..10011304,10011975..10012269,10012344..10012478,10013186..10013763

Expression

GEO Profiles:Os09g0323100

Genome Context

<gbrowseImage1> name=NC_008402:10010713..10015462 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:10010713..10015462 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcatgctacctgtgatgatgtgcatgagcatgctataaatgtatcacatggagaaactgcatcaacatcaaccagtcatcaagatttgcacagtgattcagatgattcacatcaggatgataggccttcaacaagcacacaaaccccatcaccacagtcttcagcatcaacttcgcccactgcatataacaccagaaatttatcctttcctagaagagatagtatgtatggtcatggaagaagtatttggaattctggtttgtggatctcgtttgaactggtcatatatgtagtacagattgtagctgctattttcgtccttgtcttttcaagagacgaacatccgcatgcccctttatttgcatggataattggttacacaattggctgcattgcaagcattcctcttatttgttggcgctgtgcccatcgaaacagaccttcggaacaagaacctgaacaaccacccgcagcctatcctaatttgacttcctctcaatcatcagaaggacgcaatcagcgtagcagtggtactgttttgcattttggatgtatcacaatttcgtgtccaaggcctagcatattggcttatcatttcaagacagctgtagactgtttctttgctgtatggtttgttgttggcaatgtgtggatttttggtgggcacagcactttgtcagattctcaggaagctcccaatatgtataggctatgcttagcattccttgcacttagttgtgttgggtatgctattcccttcgtcatgtgtgcagccatatgctgctgctttccatgcttaatttctcttctgcgccttcaagaggatttgggtcatactagaggagctactcaagaactaattgatgcactgccaacctacaaattcaagccaaaacgaagcaaaatgtgggttgaccatgcttcaagctcagagaatcttagcgagggtggcatcctgggcccaggaactaaaaaggaaaggattgtttcagctgaagatgctgtgtgctgcatctgtcttactaagtacggagatgatgatgagctccgtgagcttccttgcacccacttctttcatgtgcaatgtgtcgataaatggctcaagataaatgcagtgtgcccactctgcaagaccgagattgggggtgtggttcgatcattttttggcttgccctttggtcgccgacgtgttgataggatggcaggaagaggtatagctagctcgagattcactgtatag</cdnaseq>

Protein Sequence

<aaseq>MEHATCDDVHEHAINVSHGETASTSTSHQDLHSDSDDSHQDDRP STSTQTPSPQSSASTSPTAYNTRNLSFPRRDSMYGHGRSIWNSGLWISFELVIYVVQI VAAIFVLVFSRDEHPHAPLFAWIIGYTIGCIASIPLICWRCAHRNRPSEQEPEQPPAA YPNLTSSQSSEGRNQRSSGTVLHFGCITISCPRPSILAYHFKTAVDCFFAVWFVVGNV WIFGGHSTLSDSQEAPNMYRLCLAFLALSCVGYAIPFVMCAAICCCFPCLISLLRLQE DLGHTRGATQELIDALPTYKFKPKRSKMWVDHASSSENLSEGGILGPGTKKERIVSAE DAVCCICLTKYGDDDELRELPCTHFFHVQCVDKWLKINAVCPLCKTEIGGVVRSFFGL PFGRRRVDRMAGRGIASSRFTV</aaseq>

Gene Sequence

<dnaseqindica>4159..4395#3194..3488#2985..3119#1700..2277#gctttcgcgagagagggacacctgctctgcttccgcttccgcttccccctctcgagtctctcgcctctcccccgtggccaacccacacaccgcgggttggaggaggaggaggaggaggtaggggaaatccccgtcggccgtcggctcggcgccgaatcgatccggtgagtgagtgattgagttcgtctctgctctctctcctccttgttcaattatcaagctcttgaatcgagtcctagtagtagtgtgctagaggtgctggatgatttgggtttttggggattttttttttttgggggggggggttgtttgggaactgctagtgcgtttgtggtatactggtatgggagttcgttgctaatggacggggtatttgggaacttttagggttttgtttggatggatttttggttgtggtttttgtcaggaatgggtgtcggcgacttggttagctttagcttttgagaatttttttcgcccctgttgttctgttcatggttcatctttagattcagaggagaatccttctagcgtttttctgagaatgaaacctttttttttatgtttttatttttacggggctataatttttccactgccttttgtgattactattacataattacatgtccctttgatgaataatggatgttggttctttggctaaaagtcaaattgcgacttgaagtagaaacgggtgtacctgggattaagttgccatcgctggaactagagttaattattggtttgatcattgttgcttcgcgttggatatactatcggtttagcagttagcatgatactaaatcataggaaggctactatgattggagaaccgtggtgttgtataactgattagattctttcaaatatgattttcagttagaccgctcattggttcaggatcagggtcttttgcagttctcccaaatattgcactaatttgtttgccaaataatcatgcaaaacttacatgagtggtggcattaactcttttattcaaatacatggttgttcaatgatggtattaactcttctattcaacaggctgtaaaaaattaagtgaataatccttgtcccgctacttaaaatctagtcaagactcagattggaaaccattggggactagtaaagtttatgggacttggacgtgtacattacatgcacatgcccatgatacattaacaggatggatgttctattctggaaggttaaatataatagttcttagaaagttagagttttcagaccgatggtatgcttgcatatatttttagaagtatcaaatatgatgagagttcttaaaagaattgggtttgttaactatgttgagtgccttctactatttattttacaggtttttattgttcatggtgatatactatatgcatgaataagttacagttatgtaatatatatgggcaaggatgtataagaagttcatttgttttctaaatttgtagcttaggcttcttctgctgggctcttccatgaagcaaatgaagtttataatgcacatactaatgttcagtatattatactgagaatcaactttattctcagctgtatatacactagtatgccagccattggtagctacttgaaaggatggtgaaacgcatatgattacccatgatgagcatgtgtgttccctttttttattagtgctaagctggaaatcaataaatccaagatattcatggagcatgctacctgtgatgatgtgcatgagcatgctataaatgtatcacatggagaaactgcatcaacatcaaccagtcatcaagatttgcacagtgattcagatgattcacatcaggatgataggccttcaacaagcacacaaaccccatcaccacagtcttcagcatcaacttcgcccactgcatataacaccagaaatttatcctttcctagaagagatagtatgtatggtcatggaagaagtatttggaattctggtttgtggatctcgtttgaactggtcatatatgtagtacagattgtagctgctattttcgtccttgtcttttcaagagacgaacatccgcatgcccctttatttgcatggataattggttacacaattggctgcattgcaagcattcctcttatttgttggcgctgtgcccatcgaaacagaccttcggaacaagaacctgaacaaccacccgcagcctatcctaatttgacttcctctcaatcatcagaaggacgcaatcagcgtagcagtggtactgttttgcattttggatgtatcacaatttcgtgtccaaggtaatttgtagttccatgttatttttctatcttgaatttcctaaagtcctgtatgtgaactcgtgtatgcagtctcactcctatgcattttttgaagaaactgctatccatttgcatcttataaacatatttatgctttccaataactgaaagatgcaacaaataaactgatagttgaattgattgaaactatcaactctagggcatcctaattagtttatttttgatattccattggatcacgcaggtaccacagtcctatgttcttgagttgagccttctatttgtgcgtagtaccacgatatggattctacaatatatttttactgcaatttgttttttctcagtcattctggaagtgtagaagatatatatgctcttgtttctttgacctaggaatttggaacagttgtgttgacctcttcaaggtgtaatattacaatgttcgctgcagatacctcattacattggaggggaggatgttccctttctatatttgttgtgcttgacaaaagcattcaacattgtggagcgtaatgtgtcctatttaactggaattggtcctgttgaaaattgtactagtctactctaaagtattaaaactttataagtaaatttgaagaaatgcgtgatgcgagatcttatagtacttagttttgtgctaaatttgatatggatgtattaactgaggtgattatacattacaggcctagcatattggcttatcatttcaagacagctgtagactgtttctttgctgtatggtttgttgttggcaatgtgtggatttttggtgggcacagcactttgtcagattctcaggaagctcccaatatgtataggtattttctttcctatcattcatagcttttctgaactcaatcaactcatgccttactttgttgcctcttgctaggctatgcttagcattccttgcacttagttgtgttgggtatgctattcccttcgtcatgtgtgcagccatatgctgctgctttccatgcttaatttctcttctgcgccttcaagaggatttgggtcatactagaggagctactcaagaactaattgatgcactgccaacctacaaattcaagccaaaacgaagcaaaatgtgggttgaccatgcttcaagctcagagaatcttagcgagggtggcatcctgggcccaggaactaaaaaggaaaggattgtttcagctgaagatgctgtgagtatatttcacattttcatatcattttcatgtctgatgatacttgatttgcaattagtattgagggggtttccgtaaaacaagtattgatgggattccttgtatcgaccttcatgtaccttataatttagtaatcataactccattcacaagtgaatacttaagcagcctctgttatgcagtaatatgtactgtcttagccttatcttattttggaatatatttaacaaaaggtctagctcgtgatgatgcttttacacatctttttcagataacaatgagacttcccttttttcctcagtgaaacatatagtgttctaggtaaatattcattaacaaaagtgttttagggaaatattctgctttatgagaaatagttttgtttatattatactacagtatcttttttctcgtgtatcttcaaacagttgtagttacactcgctttcataagtccttttctaaattccattcatttccttcagtaacatgggacctcttggaattttccaagttacctgacttactgtctggattattatttttgtagctcattcaatttgccattactaacttgaaaccagggttctcgaaataatgttatagttgttttagtttgattcataagtcataacatataacttgtcaacatctattgatatctgcaggtgtgctgcatctgtcttactaagtacggagatgatgatgagctccgtgagcttccttgcacccacttctttcatgtgcaatgtgtcgataaatggctcaagataaatgcagtgtgcccactctgcaagaccgagattgggggtgtggttcgatcattttttggcttgccctttggtcgccgacgtgttgataggatggcaggaagaggtatagctagctcgagattcactgtatagaacacgtcttcttctctagcatgtttgcttgtttcatctgctcatatgcacataaaagacgtgctcatggattgtagtttgttgatttgcaatgaaagcgataatctgctttcatcacccttgagttcaccaaagtgatgacagaaaagtggagacctgatgcttgcagtgacaagtttctgcagtacagtagaaacataagtatattctgatgtaacatttgatgtcaagattgtaaataaagagcacaaagttcacttcgggggtgtatatctgcatgtgtatgggaaaggaaagcctaattagttagtaactttgtgggcattttattgtgtgcaatcattgatcttgtttt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0323100, RefSeq:Os09g0323100