Difference between revisions of "Os09g0434900"

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(Created page with "{{JaponicaGene| GeneName = Os09g0434900| Description = Zinc finger, RING-type domain containing protein| Version = NM_001069789.1 GI:115479320 GeneID:4347144| Length = 642...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os09g0434900|
 
GeneName = Os09g0434900|

Revision as of 20:59, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0434900

Description

Zinc finger, RING-type domain containing protein

Version

NM_001069789.1 GI:115479320 GeneID:4347144

Length

6427 bp

Definition

Oryza sativa Japonica Group Os09g0434900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:16638042..16644468

Sequence Coding Region

16638430..16638589,16643656..16644386

Expression

GEO Profiles:Os09g0434900

Genome Context

<gbrowseImage1> name=NC_008402:16638042..16644468 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:16638042..16644468 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgagcgccgcggcgtcggcgtcggcgtcggcggcgcaggagctcgaccgggagcagtacctgcaggagctgatccggggctccatgctggacccgccgtcgtcgtcgtcgtcccgcgcgggccgcgtgcggccgctcaccgacgacgagatcgggcggttctactgcgaggtctgcatggagtggaagctggtgttcgaccggttccgcgtctccgacggctgcccccacgcgttctgcgtcgcctgcgtcgtcggccacatcgaggcccgcgtcgcggcggggagcgtgcccgtgccgtgcctcctggcgggcgggggcggctgctccggcggcggcgtcatgcacccggagcgctgcaagaagctgctcgacatcgacgtgttcgaccggtggtgcgtcgcgctctgcgagcgcgccgtcggccccgcgcgcgcgcggtgcccctaccgcgactgcggcgagatggcggcgctcgagggcgaggcggcggccgcggccctgcccctgcgcgccgcggcgtccaaggcgtcctgcccgacctgttcccgcgcgttctgcctgcagtgcgaggagccgtgggacgaccgccatggcggcggcggcggcggcgacggcggcgcacggtgcgcgctgacccagctcgccaaggggcgcgagtggcggcgctgccccagctgccgcgccatgatcgacaagatcgatgggtgcaagcgcatgacatgcagatgtggcactgtgttttgctacgactgcggttcatcctttaatccgagaatgtattcatgcaagtgtactcctcgcaaatcttcacaatcggaggaggaagacggattcatcgaccttacttgctcagaccgtccgcttaatctggggaatcattgctag</cdnaseq>

Protein Sequence

<aaseq>MASAAASASASAAQELDREQYLQELIRGSMLDPPSSSSSRAGRV RPLTDDEIGRFYCEVCMEWKLVFDRFRVSDGCPHAFCVACVVGHIEARVAAGSVPVPC LLAGGGGCSGGGVMHPERCKKLLDIDVFDRWCVALCERAVGPARARCPYRDCGEMAAL EGEAAAAALPLRAAASKASCPTCSRAFCLQCEEPWDDRHGGGGGGDGGARCALTQLAK GREWRRCPSCRAMIDKIDGCKRMTCRCGTVFCYDCGSSFNPRMYSCKCTPRKSSQSEE EDGFIDLTCSDRPLNLGNHC</aaseq>

Gene Sequence

<dnaseqindica>5880..6039#83..813#gcactagcccaagtccactccatccacttcctagttccttctcgccgaagaattagcgccaagtacgcgtcgtccccctcccatggcgagcgccgcggcgtcggcgtcggcgtcggcggcgcaggagctcgaccgggagcagtacctgcaggagctgatccggggctccatgctggacccgccgtcgtcgtcgtcgtcccgcgcgggccgcgtgcggccgctcaccgacgacgagatcgggcggttctactgcgaggtctgcatggagtggaagctggtgttcgaccggttccgcgtctccgacggctgcccccacgcgttctgcgtcgcctgcgtcgtcggccacatcgaggcccgcgtcgcggcggggagcgtgcccgtgccgtgcctcctggcgggcgggggcggctgctccggcggcggcgtcatgcacccggagcgctgcaagaagctgctcgacatcgacgtgttcgaccggtggtgcgtcgcgctctgcgagcgcgccgtcggccccgcgcgcgcgcggtgcccctaccgcgactgcggcgagatggcggcgctcgagggcgaggcggcggccgcggccctgcccctgcgcgccgcggcgtccaaggcgtcctgcccgacctgttcccgcgcgttctgcctgcagtgcgaggagccgtgggacgaccgccatggcggcggcggcggcggcgacggcggcgcacggtgcgcgctgacccagctcgccaaggggcgcgagtggcggcgctgccccagctgccgcgccatgatcgacaagatcgatgggtgcaagcgcatgacatgcaggtaaactcatcgattcaccactactccgatcctcctcttcgattcaatctttaatttcgatcgctagactcaaatctctaaactttgcttccaaacttcgaaatcggggcgaaattttcgccactcatctgaaacacgtattccattcgttagttttgactaaccgttgttgacttgaccgaacacgtactgaacttccctcgcgaagtggacgctgaaaagggagagaaatatcttagcggtaactgaccattatttatggagaaaataaaatcttttttaaagaaatatttgcttgtttctcaaactgctaaccaatgcattttgtgtaaaagttttcttactaaaatattgtaacgccgcgcttttagcaagacgttaaaaactaattcggcaaaatcctgattgcaaaaatttcttttctttatgtgcgagtctaagtcgtgccatggatctcaattcaaatccgtccttgttccctctcatcgccatcaaaatcgtccacctcaagatttctattccaattcaagtcttcgaaattcaaatccttccttgaatcctcgccaaatacttcttcgaatccaaaattattcaaatcccacctcgaatccttcccttgactccaccttatgttcctagaggccaagtatcaaggttaaattccaaaatccttctcaaattctctccaatccaaattccaatcccaatatcctcccaactcaaatctctatgcagaagtttattttgcctccctcgggtgttgtgggccattttcccctcagcccacttccctctcccagccgctctccccttccctcgagcgccgctcgcgcgtgcgccatggccgagagagagagagctctcttttctctctctcgttctctctcctctctcccgatgcccattgccgctaccctccaaagacgggagccagcgctcgcgctcccctctcactcttcctcccagaacggcatggacaagcctcccctttttctccctcttttcccctttttccctctcagactcgacctctctctcacgcccatgccattgcgcgcggaggcagaacgccgctgacgccgcgcgccagttcgccgcccccactttgaccacgccaagccgcgccagcccgcgctcgcggttcaatttccgccgctcgatccaccgccttcgccgcccaacacatccacaccgtcgccgctttcgcactgccaacgaaaccgccgctgccgcccgtgaacaccaaccgagctcccttgaccgccaatgtcggtttccctcctccaaaccgacctctcctcctcgcctataaagcccgcgccctcccctctcgtttcgtcttcacctcgctcgaaccacccgcgccattgttgccggccgccagctgctcgcccccgcccctccgcgactgcctcctcgctgccgcgttgtgccaatggccgcgtgagcctcggcgtcggcctcgtcaagctcggtgccgcactgccgtggccaagagcgtgtgcacacactcatcatcctttcggcctcgctgcctccctccttttctcggccgcgccctctcggttccgcgccgccccgccgtcgcgaccacctcgccgcgactccctccgcgtcgccaacaccgctcctccctcaccggtgagctccccaccgtattcctcctcctgccgcacaatgcgccgcgcgcctcgccgttgcgctttttcagccgcggcacacagtcgcgcgccgtcgtcgggccccagctcgtcgaccaccctagccaacaccgtccttgaactccctagggcctccccaaaccattccatagcaatgccgtcgcctggcatggcctcgccgccattaccgtcagctcctagaggccgccgtcgacgctagccctcctcggtgctcctccaccctatccggcgccggaaacagaatccccgactcccagagatactcccaccaccttgagttgaatccttgtcgcccctccgccgtttcccccttttttctcaccgccggcgtgcgtcgccgcaatccgccgtcgtcgatcttcctccggcgaatccgagccactggctcgcctcctctcgtgcccctcttcactccggtgtgctcccccttggccgaagaccgtcgcgccatgctccggtgagacccccgccgcccgccgtccatctcggccggcctctttcttcctcctctcgccggcctgcgtggcatgccacggaggcgccacgtcagcgccacctcggtgaagaccgagtcaaggcgggtccgctccctcctctctctctcagtgcgcgcggtccacggagagcctaacggctgcgcgtgggcctgccatccttcggtccacccggtgcaccaatccgtgcgccactcctacccgaaccctagcgcgcgccgcatgcaccgcttccacggtgagccgcgccactgacaagcgggccccactcgggaccccgcaaggtggactcggcccaccggccctccctctccctcactctccccgcgcccccttgggccgcctctccgggccggccggcccattagttcggccgagtcgtgcctgtcctctcgagtcgcacccgagccacccgaggaagtctaaatcatatccctcctttaatttctttccaaaaagggtttaataaattattaaatcgtttttcctttgattagaaaatccaataaacttcgaaaatccatatcttctcaaccgctcatccgattgaccccgttccacttccagtaattctgtaaaattgtgatctatctaatggtactattatttagtctaaataggatattttttcttggtcttttgtttaggtttttgattgtttgcgtatagttgcggtcaccggattttcatcgatcgtgggttttctcgaagatacgtgaagcttcgtgaagaccttgagcaagacaaatcaccctttgaccaattgctcctataattggaaaatcattattattttgtttgcaacttgcattagtagaatcacacacttaacttgcttggcctcggtttgcgtgccaaaccgacagacctacccagtagtcgcactaatttttgtaggttgtactaccctgattccttgtcgttccacctttgtggtacttcggtatccgtgctctctgagcacatataccaactattccacatacaccattgtttgtatcggtgtgtttgagagccttgaaaacccgacatatggcatcggtgtgtttgaaaacaaaatagattgtgaaaactcgcgatgcgggggttgtgcctatgtggtactgtcctgtattcgcatataaggaccgattcctgtgggaaattcatccgagcatataataagtgcgaccacacgggtgcaatgggacgcccctggctgagtaattagctaatcggaggagccatgatgccatgagacatgtggattcaacgggctggtgtcaggtagaaccctcgggcttcctggcacaatatggtctgggacctaacctgttgtcggtctgggacccctctcgttggcatatggcaaccctgtgtcggctttcgaaatgccttgtcatgaaaaccttagggtctcccgacatggctgatctcacggactgggtgatccgggttagtaatgtcgtgtgggtaaagtgtaccccctctgcagaggttaactaactgttcgaacagccgtacccacggtcatgggcggatgtgaggtgtttcctgtagcgtagatttgtttgcctgtgctttgtgaaaagttgttgtggtttgggaatcgttaccagaatcagcctatgtggcagatggatgacctgagtggtcaagaaacgaatctgtgtgattcgggatgtctacgggcatcatagactaggcttcccgagttgaagcggattgttgtgctgctgggcagttggactctgggagtccgagaaaatgaaaaggctctgggagccgcttaatcaagtgaaatggctctgggagccgagaagtaatgatctgacccgggggtcggtacattaccaattgagttattgaaaaacatctcttaaagtcgaatcaagacacaagtctcttttcggcccaaacttagaaagaagtaaaccacttagtaatttcaaaatgatttcaaaacaaaggatttgcaaaacaaccttgcctctcttccaagcttgcatcaaacacctaaattctcgtgacttgctgagtacgaaagtactcacccttgctctatataaatatatatatagttcctacaccttgaaatgaagatgaagtgaaatgaagaatagggtttcgtcctagttcccagccgtcgcctgtggtgttgggtgttagtccgttggttccgctgctgctgctgctgttggtgtttcctcgttcgtgtcgtcggttgcattctcgggctgttctaaaatgcaacctaagttaaggtaaataagtcctctatttattataaggattgcaatgattcatatttgtcaccgtgggtaccagcgctatgtcctgggactggtactgagatcgcggtttcgtaggaagcggttcacgccgtttttcctacgacacgctcctgtcaggtgctgttgtacggcggtgccggattggggtgtgacatcttgaatgcttttataaagctactttcaattttgcagtagttataattcatttgtttatgctttgaaataactgtagaaaaaaaataaatgatccatcaaaccactttcagctattcaaatagagccgtagacccgtagttatggaattatgctttgatttttttacgattacacggcaaacttacacgcacacacaacactacacacgcaacacaacactcacatctccgcgaatacgtctcctaacacatgctctaagaaatagaaaccaggagcacatacatgatctcactaaagttttttagaaagttcacatatatatgcgtaatatttgtgagcaccagcattaatttgaactctggtgggtagagtcatacacccacgactttaccaccacatcactggtgcttcctaagtcggcatgaaatttcttacattcatgtgataaattttgtttgcagatgtggcactgtgttttgctacgactgcggttcatcctttaatccgagaatgtattcatgcaagtgtactcctcgcaaatcttcacaatcggaggaggaagacggattcatcgaccttacttgctcagaccgtccgcttaatctggggaatcattgctagtaatgttctgtagcgagtcggcgatcattcgattcaacctgtttccattactccatttgtatatgcggagttcttgttcttgacggaaacgataatgatatgtcgcgatttctcatcgaccaatatttggaacatttttttttcatctgtatatggcgactagtgagtatgattggacaaagctgaggcgcgttgatattgtcttttgggcgagagaaccggtagaaacttggttaaggacaaggggatgagcccagtagcctgttactctctgttagtacttcagcccacgataggctgagctaacgatttcttacagattgcccacttttgataaaaaaaaaacgaaattttatatatggctccctgcaggttagcgcaggctgcg</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0434900, RefSeq:Os09g0434900