Difference between revisions of "Os09g0463300"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os09g0463300| Description = Protein of unknown function DUF547 domain containing protein| Version = NM_001069940.1 GI:115479622 GeneID:4347301| ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os09g0463300|
 
GeneName = Os09g0463300|

Revision as of 21:00, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0463300

Description

Protein of unknown function DUF547 domain containing protein

Version

NM_001069940.1 GI:115479622 GeneID:4347301

Length

3387 bp

Definition

Oryza sativa Japonica Group Os09g0463300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:18188125..18191511

Sequence Coding Region

18188234..18188362,18188462..18188578,18188700..18189149,18189269..18189636,18189770..18189869
,18190447..18190506,18190622..18190705,18190835..18190960,18191080..18191388

Expression

GEO Profiles:Os09g0463300

Genome Context

<gbrowseImage1> name=NC_008402:18188125..18191511 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:18188125..18191511 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatggagaaggatcagaggaagggcgccatgccggtgaagaagggatcatcggccaacgcggtcaccaaaggcatcacgaacagaatccaagcgaggagagagcggaagctcgcactgcagcaagatgtggacaagctgaagaagaagctgaggcacgaggagaacgtccaccgagccctcgagagggcgttcacgaggccgctcggcgctctgcctcgcctgccgccgtatctgccatctcaaacactggcgcttctcgcggaggtggcggtgctggaagaagaggtcgtcaggctcgaggagcaggtggtcaatttccggcaaggactctaccaggaggccataatcttctcctcggccaagaacacgagcctccccggcggcgagggatgcgtgccggcgcagctcatgccgtcgagcccggtgccgaactcagaggtctctccggcaaattgtcattctcctcctactcgaccttcaatgaacggggtcgccggtgcaaagcaaacgccgagaaagccttctccttcggcggcggtggcgcaagacgaccgctccggcgccgggaaagagaaccagtcgtgcagtaacacaccggctagaaattgtcgccattcgccgctgctgcagaaggcatcaaaatccagactgccgacagcagcagcgcctgagaaacgcagggctactgctcagacgattagcacagtgccggaccgtaaaaggctcgcagacactgtcagcaataattcagaaaaagcttcccaagatgactcgagcgtgccgaacagattgtcggaggaactgttgagatgcctgctcgccatcttctcgcagatgggcggttcatcagcaagcggccaagacgaggagcaggcggcattgtctccttcggtttcaggttcttgcgagagctcagaggacgcataccctcaagatccttatggcatactggaattcggcacaagagacgttgggtcatacaagcgattccatgtaatcgacgccacctcgttcgatcagacggccatggagaacgacaccatgcttacccggaaactcaaggctttgatccggaggctttcatcggttgacctgacggggctctcccatcagcagaagctggcattctggatcaacatctacaattcgtgcatgatgaatgcatttctcgagcaagggatacctaccacccctcatatgctcgtggcaatgatgccgaaggcgacaataaatgtgggtgggcgcacgcacagcgccatgtcgatcgagcatttcatcctgcggctgccctacagcgtgaagcatgtgaatcctggtggagtgaccaagggcgccgccgacgacgtgacgatgcgaggcgtgttcgggctggagtggcctgagcccctggtcaccttcgcgctctcctgcggcagctggtcctcccctgctgtgagggtgtacacggcgcggggagtggaggaggagctggaggcggcgaagagggactacctgcagtcggcggtggtggtgtcggcgccggcgaaggtggcgatcccgaagctgctgcactggtacctcctcgacttcgccaaggacgtggactccctcatggactgggtgtgcctccagctgccgagcgagctgcggcagaaggcgatgaggatcgtggaggacggcagaaggggtgtcgccgccgagtcgcgccgcgtgcaggtcctgccgtacgaattcagattcaggtacctgctggcctcatga</cdnaseq>

Protein Sequence

<aaseq>MMEKDQRKGAMPVKKGSSANAVTKGITNRIQARRERKLALQQDV DKLKKKLRHEENVHRALERAFTRPLGALPRLPPYLPSQTLALLAEVAVLEEEVVRLEE QVVNFRQGLYQEAIIFSSAKNTSLPGGEGCVPAQLMPSSPVPNSEVSPANCHSPPTRP SMNGVAGAKQTPRKPSPSAAVAQDDRSGAGKENQSCSNTPARNCRHSPLLQKASKSRL PTAAAPEKRRATAQTISTVPDRKRLADTVSNNSEKASQDDSSVPNRLSEELLRCLLAI FSQMGGSSASGQDEEQAALSPSVSGSCESSEDAYPQDPYGILEFGTRDVGSYKRFHVI DATSFDQTAMENDTMLTRKLKALIRRLSSVDLTGLSHQQKLAFWINIYNSCMMNAFLE QGIPTTPHMLVAMMPKATINVGGRTHSAMSIEHFILRLPYSVKHVNPGGVTKGAADDV TMRGVFGLEWPEPLVTFALSCGSWSSPAVRVYTARGVEEELEAAKRDYLQSAVVVSAP AKVAIPKLLHWYLLDFAKDVDSLMDWVCLQLPSELRQKAMRIVEDGRRGVAAESRRVQ VLPYEFRFRYLLAS</aaseq>

Gene Sequence

<dnaseqindica>110..238#338..454#576..1025#1145..1512#1646..1745#2323..2382#2498..2581#2711..2836#2956..3264#ggagaagaggaatctgttgctttgctttgcttcggttagcttctttcacagctaaacaacgccttctttttcctcttttgatgatgatactgttgttttacgtgttcagatgatggagaaggatcagaggaagggcgccatgccggtgaagaagggatcatcggccaacgcggtcaccaaaggcatcacgaacagaatccaagcgaggagagagcggaagctcgcactgcagcaagatgtactacctgaattctgtcccaaattctcgcaatttgagaagcgcattggttcgtccgagttgtgttttgtgacgcaattcgctgcctggattttacaggtggacaagctgaagaagaagctgaggcacgaggagaacgtccaccgagccctcgagagggcgttcacgaggccgctcggcgctctgcctcgcctgccgccgtatctgccatctcaagtcagtgccacatttgcattcgcatttgcatcaaacgaaacgcattgttcttgctctgcttgggacaattcggctctgaattctgaacatgttcctgctctgaattctgcgatgtgcgaagacactggcgcttctcgcggaggtggcggtgctggaagaagaggtcgtcaggctcgaggagcaggtggtcaatttccggcaaggactctaccaggaggccataatcttctcctcggccaagaacacgagcctccccggcggcgagggatgcgtgccggcgcagctcatgccgtcgagcccggtgccgaactcagaggtctctccggcaaattgtcattctcctcctactcgaccttcaatgaacggggtcgccggtgcaaagcaaacgccgagaaagccttctccttcggcggcggtggcgcaagacgaccgctccggcgccgggaaagagaaccagtcgtgcagtaacacaccggctagaaattgtcgccattcgccgctgctgcagaaggcatcaaaatccagactgccgacagcagcagcgcctgagaaacgcagggctactgctcaggtaaaaacagtagtaataagatccttattgctgctgaatggtatttatttacacatttttctaccatgaactaacttcttctgaaccgtactgctgctgcatttttttttatcacacagacgattagcacagtgccggaccgtaaaaggctcgcagacactgtcagcaataattcagaaaaagcttcccaagatgactcgagcgtgccgaacagattgtcggaggaactgttgagatgcctgctcgccatcttctcgcagatgggcggttcatcagcaagcggccaagacgaggagcaggcggcattgtctccttcggtttcaggttcttgcgagagctcagaggacgcataccctcaagatccttatggcatactggaattcggcacaagagacgttgggtcatacaagcgattccatgtaatcgacgccacctcgttcgatcagacggccatggagaacgacaccatgcttacccggaaactcaagtgcgttcttgctagtgcaattttccgttcagttattacaagctcggtttggttgtctgtcgagtaggtggccgcctgacataattagcatcgctgatagaggtggttcatgtctacctggcaaaatctgcagggctttgatccggaggctttcatcggttgacctgacggggctctcccatcagcagaagctggcattctggatcaacatctacaattcgtgcatgatgaatgtaagctgtcagcctgtcactcataattgagcccacccatcctgaatttcttcatcttgatcaattatatctttgttcattttctcgttagagggaaatttccatttcggtgatagttacctccttcgttatcaatgtttgcctccgatagaatgacagaagaactactgtatgctggaatatttcgggaggttaattacttactaccgcattgcatattactagtactatatggtacagccagtacaacattacagcatgggcgtggttctgacgagtacgttctttaaccatgaactctgaacatagtgctggcatgtctgtgtactgttctcttcagtcatttagttttgcttaaagaaatgcttcctgtccccatgaccataaacaaaggctttaactaacactgatcaccatcatcatcgctttggcattattatccttaggcctaactatctcatgccatctgcgatacggcctaggaaagggtagttaaggtaggtagatgtagtagtgtagtgtcatgcctagtgcctcatacttgtccctaacacttgtcttccttgtcgtactgcaggcatttctcgagcaagggatacctaccacccctcatatgctcgtggcaatgatgccgaaggtatagcactaagtaacttcttgcaagcagcacaaatcatgatgcgccggtgattaacgaagtaatcaagtctctgacgagagagtgatctccgtgtttcgctctctgttttcaggcgacaataaatgtgggtgggcgcacgcacagcgccatgtcgatcgagcatttcatcctgcggctgccctacagcgtgaagcatgtaaggcgttacagtatagttttgtcatggtggatacggccatcgtagtgatccgggtagattggtgttccggttgcacagcaccacacgctaaaactaacaacctatatatggctcgtgaatgaacaggtgaatcctggtggagtgaccaagggcgccgccgacgacgtgacgatgcgaggcgtgttcgggctggagtggcctgagcccctggtcaccttcgcgctctcctgcggcagctggtcctcccctgctgtaagatctccatgattccgtcagatttttgcagcattacagcatgtaaaaattccgtgtagtttgtgatgaggtgttgtgtgattgtgtcttgttcttggtcatgttttttttttcaggtgagggtgtacacggcgcggggagtggaggaggagctggaggcggcgaagagggactacctgcagtcggcggtggtggtgtcggcgccggcgaaggtggcgatcccgaagctgctgcactggtacctcctcgacttcgccaaggacgtggactccctcatggactgggtgtgcctccagctgccgagcgagctgcggcagaaggcgatgaggatcgtggaggacggcagaaggggtgtcgccgccgagtcgcgccgcgtgcaggtcctgccgtacgaattcagattcaggtacctgctggcctcatgaagagaggccagtgagtagcagcaatcagcgagtgaattcgagggtgttttactgcaccttgtacacaggcttccaataattgtgagttttgttcttcggtgatgtgaatgaatgaaaggaagt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0463300, RefSeq:Os09g0463300