Difference between revisions of "Os09g0473900"

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(Created page with "{{JaponicaGene| GeneName = Os09g0473900| Description = Conserved hypothetical protein| Version = NM_001069988.2 GI:297609629 GeneID:4347353| Length = 6869 bp| Definition ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os09g0473900|
 
GeneName = Os09g0473900|

Revision as of 21:00, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0473900

Description

Conserved hypothetical protein

Version

NM_001069988.2 GI:297609629 GeneID:4347353

Length

6869 bp

Definition

Oryza sativa Japonica Group Os09g0473900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:18765041..18771909

Sequence Coding Region

18765041..18765187,18765306..18765406,18767070..18767173,18768737..18768828,18768890..18770095
,18770183..18770314,18771736..18771909

Expression

GEO Profiles:Os09g0473900

Genome Context

<gbrowseImage1> name=NC_008402:18765041..18771909 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:18765041..18771909 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcctcctccccgtggcctcccaccacgggcgccgcctccgccgccgccgccgccgcttcccccgcgcctccggaaggagcggctggcggtgccgcgactcccgccgctgcgcccgccacgacgtcggagcagcgcccggtcaaggaagggggagacgccgcggccgcgggggctgctgctgccgtgcagcagcaggaggaggaggaggtggaggcgaagccccagttgctgcgtgaagacgactcagaaacagaaatccaagtgcacgaacagaagataaacaaatatcaagctatacttgcagcccgtttgaaggccaaatacttctctaataaggattttgatggagctcggttgagctctcagccagcagcagcagcagcaccggttgctcctccttcccctttcccttccccttctccacgcagcagccccccggaggacgccgagctcgccgcagcagaagagcgcaggcgagcaacggctcagaccgctgcagcagcagcgagggcggccagactggcggcagcggagttggcagcagccagggcggaggcgaaggcggaggcggcggaagatgcggcacgtgcggcggaggtagaggttgagaccttgcgcagcagcatcaacggctccattgccggcgacatcaccgccgacagggagcttgaggagctggcaagaggaagggcacgggagcgagcagagcggtgggcagcagcccacctccacggcggcggcggcggcccaagggaccgcgcgcccgccgacgggaacccagacgagcgcaggcgtgccggcggcagcccggagctcgcacgtggccctcgcaggcagcacggctctctctcccctgaccggcgccatggtcaccacggtgtccagacggtggtcagggactttggtcccggcggtgggtggcctaccctcaccaaaaccaactacatcgagtgggccgcggtgatgagggtgaggctccaggtgcggcacatgtgggaggcagtccggtacggtgacgtcgactacgacgaggatcggcgggcactggatgccctcatcgctgcagtcccgcccgagatgcagttctcgctttcccagaagcggactgccaaggaggcctgggacaccatcgctgcggcacgcatcggcagcgaccgcgcccgcaagtccacactgcaggcactccgcaaggagtgggagaacctggccttcaagccaggtgaggatgttgatgactttgctctccgtctcaacactctcttgcagaaaatggtgcagtacggtgacgacacctacgacgaggagagagctgtcgagaagctcttccgctgcgtccctgagaagtacagacagatcgctcgctcgatcgaatctttgctggacctctccacgatgtcgatcgaggaggcgttaggtcgcctcaaggtcgtcgatggtgatgagccacagcctctctcggggcccatcaccatcggcgggaagctccatctcactagggagcagtgggaggcctctcagggtgacgggaggaagggggagtcatcttccccgacaggcggccgtaagccgcgcaaggcgcggggaggtgtccagctacggtgggcgcgaagacgtgccgagggtggcgcccgcagaggcgcccagggcccacgacgcggccaggcccacgtctcacgggtggaggaggaagagccggctctgctcctggctcacgcaagcatcgagctacctccagcggcaccggccgcagcggctttcctccaccttgatgagccgaagcgtgtctaccccagtccccgagcctccaccgactccaacaccaacacaccctcgggccacgacttcgactacgacgagctcttcgtcgacaccaccccagccggtgtccccacgcgctccagcaccaatagccactcctccgggcacgtctactccgacgccagctcgtgttga</cdnaseq>

Protein Sequence

<aaseq>MSSSPWPPTTGAASAAAAAASPAPPEGAAGGAATPAAAPATTSE QRPVKEGGDAAAAGAAAAVQQQEEEEVEAKPQLLREDDSETEIQVHEQKINKYQAILA ARLKAKYFSNKDFDGARLSSQPAAAAAPVAPPSPFPSPSPRSSPPEDAELAAAEERRR ATAQTAAAAARAARLAAAELAAARAEAKAEAAEDAARAAEVEVETLRSSINGSIAGDI TADRELEELARGRARERAERWAAAHLHGGGGGPRDRAPADGNPDERRRAGGSPELARG PRRQHGSLSPDRRHGHHGVQTVVRDFGPGGGWPTLTKTNYIEWAAVMRVRLQVRHMWE AVRYGDVDYDEDRRALDALIAAVPPEMQFSLSQKRTAKEAWDTIAAARIGSDRARKST LQALRKEWENLAFKPGEDVDDFALRLNTLLQKMVQYGDDTYDEERAVEKLFRCVPEKY RQIARSIESLLDLSTMSIEEALGRLKVVDGDEPQPLSGPITIGGKLHLTREQWEASQG DGRKGESSSPTGGRKPRKARGGVQLRWARRRAEGGARRGAQGPRRGQAHVSRVEEEEP ALLLAHASIELPPAAPAAAAFLHLDEPKRVYPSPRASTDSNTNTPSGHDFDYDELFVD TTPAGVPTRSSTNSHSSGHVYSDASSC</aaseq>

Gene Sequence

<dnaseqindica>1..147#266..366#2030..2133#3697..3788#3850..5055#5143..5274#6696..6869#atgtcctcctccccgtggcctcccaccacgggcgccgcctccgccgccgccgccgccgcttcccccgcgcctccggaaggagcggctggcggtgccgcgactcccgccgctgcgcccgccacgacgtcggagcagcgcccggtcaaggtcgccccctcccaccccaccccgtcccgtggtctccgcatctgtgtccgactgtccctttgctctttctgctctcggttatacgcggtcacactgagctcgtgttagcctcgcgcaggaagggggagacgccgcggccgcgggggctgctgctgccgtgcagcagcaggaggaggaggaggtggaggcgaagccccagttgctgcgtgaagacgactcgtaattcgcgatctccctctgttactatgctccttgttttactgcaatgcgtgctctgtgtttgcgtaattgcttgtatgaacgctgcctcactcacggttaggcttttttttttttttgccggtaatattacacagagtacgaactctgtaaacgcgctgatgtgtagtcgctatcttttatactactgttgtgggtgtggcacaatgctgacaggagtagaacgatgaggtgaggccatttagcctgttactagtatcatgatgttctttgtgtacatgatgactatgtcagcagcaccttgtcagttttgtcagcagcaccttatcagttttgtggtttattacattgtgcacaggaaagcatatcacttcatttgtgacagtgtgagataccttcacagtgttaggatatgctatgtagtcctatatttgcaaataaccaacaagcagagaaacatttttttccctccgaaaaattgtgccaaaactcatgtatatcacttatttttccttccaaatgtgctgtttctcaccaacatatggagaattctgaaatcaactgcgcataactttttgtcctgtagtatagcaaaagcttagattccgtgcctatgcacccggttttgtttgattttatctttggcatctgcaatttcacttgttctgtcttgtatatttcaaaattaaggtgtcacaatcaccttctctaatagaacccacccttgaggagttgatttgcatgatgttactatgtaaattgcaccatgaactgtttggctgccaataaaggttaacacattttttttttcgaatagagagatcaaagaaggctcaacaaatctagtgcttttaaaatagattgggaaaacagagttctgtaaaaaaaaacggagttgcaaaatatattcttctatgaaaaattgaaggactagcatgcatctttgcttgcagatatcatctgttcatcactgcatacgttaaagtttctgctacaattattgttgattacttatcatgtaccactttactactgttttccagaatagtatgtgagaaaatgaaaaataggaatataacttcagaaattgatgaaggatttaactgtttttgttatatttcctactgtaatgtaatatgttaattccataggtagtaagcatctcaatctgagctcagcacctatattaatataaattcctttctgtgtggtaaaatagtttaactctttgttcgaatttcaaaccctttgatggtttttaggtaacaaagcgaatacataagatctttgaaaaagaccaagttggtacatacttcctccgtttcacaatgtaagactttctagcattgtgcatattcatttagatgttaatgaatctagacatatgtatgtgtttaaattcattaacatctatatgtatatggacaatgctagaaagtcgtacattgtgaaacggagggagtatatactttgaagaagactaaaatttctccccacactacctcaaggcatgctctatatagaatttggaacaccttggccctcattggctcatacttgatatagaaattactctgtcatggtatttaccttctgcttgttgttgccatgagaaataaaaaaaaatggcagttaaattcgtgcattgcattgtcatgtgcagagaaacagaaatccaagtgcacgaacagaagataaacaaatatcaagctatacttgcagcccgtttgaaggccaaatacttctctaataaggattttgatggaggtatttgtgaaatcatcatctatgtgcagtatagatattacctagtatatttgtgcacactttttttttcacacgtttaatcacatacaggcatgccattttttcagtctcatgctatagagatctgctattgatacagtgcatcatttttctttcaaaaaacccatggatgaaatgagaaaacgtgacaaacttaagttaactgttaaacatagttattccattggaggccagaagaaaatccctctttaagttaattatcatcatttatacaaaaaggaggatggaacatttgggaatacataataaactgataaacatagatgcattactttcatgctatttgttttggattaagtttatcctgaataaaaaaaaaagttgaactgaagcatggcatgttacccaattggtcgacatcttaaccctaaaagtctataattatgggaccatgtctctttgcatttattaacagtaagtgtgtacgtcatcttagtatggatctgttaagcttccattttcattgaattttccatttacttactacttccactatcaaagtcctccaaaaggaaagaatgagaaaaatgtgaccttatggaatgtcaccttgggactaacaaggcccagatagactcctagtacctggactaacaagtcaggcatagattgaacacgctctcctagaactcctcatgcaaaattagtgctcagcgaataactagtaaagcaaatttacgagttgaaatgcaaaacacaataaaatgcccaaattggaaattcacctggaggaatgccgtgcctcggcatgttcatttctttgcctggctgcttgcaaaggattgactaccaaataagtcaatcgtcaacttagctgcatgtgggctatgcaatcatgtccttggagatgctgatcatacttccactgcccttcttactatgcttacgtcgaacccaacccccccccccccaccaccaccacaaccgtatgtcctgtttgaaatacgaaatgttcttccattattgtatatactttataacttgacataatcacatcactaggcctcccttctgttctcacatgtaaacgggtttctttcaagtattttgaatttttttgatggaataagccttgtggtctttggtccttgtggtccttctcttgcttttaggttgtttttcccccttttaggacagcatcctttcagttttgcttttagcatctttcggttttgcttttagcatccctaggacagcatctagcatctcctttatgctttattcagtttggatgctctctaggacagcattgcgttcaaattttagactagtgtgggcagcaattagctagcagccatccagccagctatggctatatatatgtatccaacctccctcgggaaggtatggcttttgtgttttgtgaatgaagaaaaccagaaaattgccccatctcgagtgccatcctcttctcaatgagagtaaccattgaaattctaacatctggtatcagagccacactttcctgtaggctaaacatctcttgttccaccccttcccaagctcggttgagctctcagccagcagcagcagcagcaccggttgctcctccttcccctttcccttccccttctccacgcagcagccccccggaggtgagccatgtccgacgctcggtctcggcgttcggtcgcctcgagcactcggcgtcagcaggacgccgagctcgccgcagcagaagagcgcaggcgagcaacggctcagaccgctgcagcagcagcgagggcggccagactggcggcagcggagttggcagcagccagggcggaggcgaaggcggaggcggcggaagatgcggcacgtgcggcggaggtagaggttgagaccttgcgcagcagcatcaacggctccattgccggcgacatcaccgccgacagggagcttgaggagctggcaagaggaagggcacgggagcgagcagagcggtgggcagcagcccacctccacggcggcggcggcggcccaagggaccgcgcgcccgccgacgggaacccagacgagcgcaggcgtgccggcggcagcccggagctcgcacgtggccctcgcaggcagcacggctctctctcccctgaccggcgccatggtcaccacggtgtccagacggtggtcagggactttggtcccggcggtgggtggcctaccctcaccaaaaccaactacatcgagtgggccgcggtgatgagggtgaggctccaggtgcggcacatgtgggaggcagtccggtacggtgacgtcgactacgacgaggatcggcgggcactggatgccctcatcgctgcagtcccgcccgagatgcagttctcgctttcccagaagcggactgccaaggaggcctgggacaccatcgctgcggcacgcatcggcagcgaccgcgcccgcaagtccacactgcaggcactccgcaaggagtgggagaacctggccttcaagccaggtgaggatgttgatgactttgctctccgtctcaacactctcttgcagaaaatggtgcagtacggtgacgacacctacgacgaggagagagctgtcgagaagctcttccgctgcgtccctgagaagtacagacagatcgctcgctcgatcgaatctttgctggacctctccacgatgtcgatcgaggaggcgttaggtcgcctcaaggtcgtcgatggtgatgagccacagcctctctcggggcccatcaccatcggcgggaagctccatctcactagggagcagtgggaggcctctcagggtgacgggaggaagggggagtcatcttccccgacaggcggccgtaagccgcgcaaggcgcggggaggtgtccagctacggtgggcgcgaagacgtgccgagggtggcgcccgcagaggcgcccagggcgttgccaccggcaaccacaagccggcacgagacgacgcctgccgcaactgtggcaagcttggccattgggccaaagactgtcgacagccacgacgcggccaggcccacgtctcacgggtggaggaggaagagccggctctgctcctggctcacgcaagcatcgagctacctccagcggcaccggccgcagcggctttcctccaccttgatgagccgaaggtactcgtctccctctgcaacggctctagcaacgacaaggctgatgggtggtaccttgacaccggcgccacccatcacatgaccggccgacgggagttcttcaccgagttcgactccagcgtccgaggctccgtcaagttcggggacgcctccggcgtggagatcaagggtgttggctccgtcaccttcaccgccaagtccggtgagcacaggctgctcaccggagtctactacatccccgcgttgaggaattctatcatcagcgtgggacagctggatgagaacggctcacgcgtgttggtcgaggacggactcatgaggatttgggatcgccgtcgtcgccttcttgccaaggtaaccagaggcactaatcgactctacatcctcagcgcgcaggtcgcacaaccagtttgcctcgccgctcgtcgggacgacgaggcgtggcagtggcatgagcgcttcgggcacctccacttcgaggccctgaagcagctcagtgccaaggagatggtgcgaggcatgccgtgccttgaccacgtggagcagctctgcgacgtctgcgtggtgacgaagcagcggcggctcccctttccccagcagacgagcttccgagccaaggagcggctcgagctcgtgcacggggacttgtgtggcccagtgacaccggccacaccaggaggacgacgttacttcctgctgctcgtcgacgacctctcccgctacatgtgggtgatggtcctcggcagcaagggagaggctgcggacgccatcaggcatgcgcaggctgctgcagaggcggagtgtggccgcaagctgcgcgtgctgcgcactgacaacggcggcgaattcacggcggctgaattcgcgtcgtactgcgttgatgagggcattcagcgccactacaccgcgccgtatagcccacagcagaacggcgtcgtcgagcggcgcaaccagacggttgtggggatggctcgggctcttctcaagcagagggggatgccggccatcttctggggggaggcggtggtgacagccgtctacatcctcaatcgctcgcctaccaaggccctcgatggcaggacaccgtacgaggcttggcatgggcacaagctggcggtctcccacctacgggtcttcggctgcctcgcgttcgccaaggagcttggccacatcggtaagctcgacgacaggagcaccccaggggtgttcatcggctacgcggagggctcgaaggcctaccgcatcctcgacccggagacacagcgtgtgcgcacagtgcgcgacgtagtgttcgacgaagggcgagggtgggtatgggacaaggcggtggatgatggttcgactccgacgtacgacgacttcaccatcgagtacgtccacttcgagggagctgggggagtaggcagctcttcttcaccgagcgtgtctaccccagtccccgagcctccaccgactccaacaccaacacaccctcgggccacgacttcgactacgacgagctcttcgtcgacaccaccccagccggtgtccccacgcgctccagcaccaatagccactcctccgggcacgtctactccgacgccagctcgtgttga</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0473900, RefSeq:Os09g0473900