Difference between revisions of "Os09g0488600"

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(Created page with "{{JaponicaGene| GeneName = Os09g0488600| Description = Protein kinase PKN/PRK1, effector domain containing protein| Version = NM_001188979.1 GI:297727088 GeneID:9272371| L...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os09g0488600|
 
GeneName = Os09g0488600|

Revision as of 21:01, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0488600

Description

Protein kinase PKN/PRK1, effector domain containing protein

Version

NM_001188979.1 GI:297727088 GeneID:9272371

Length

2149 bp

Definition

Oryza sativa Japonica Group Os09g0488600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:19498778..19500926

Sequence Coding Region

19498778..19499137,19499459..19499671,19499749..19499901,19500116..19500235,19500309..19500395
,19500489..19500926

Expression

GEO Profiles:Os09g0488600

Genome Context

<gbrowseImage1> name=NC_008402:19498778..19500926 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:19498778..19500926 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtcgccgccgccgtcggcgaggcgacccctccgccgggcgggccaccctcccgcgtgtccgtgtcctcttcttcgtccaccccgcggcgccggtgcgccgccctcacgagccgcttccgcgagccggcgagcccgcggcggcacgcgtgggtgtcgctgcagggccgcctcgtcggcgccgaggaggcgacgtccgccgcctcggccgcgccggggctccctccggatgaggcggtggcgtgggagctcttcagcccgctccaccgcgtgctcctggtcgccaccgtcgcggctgcctcctcccgctcccacgaggcccgccgcgtcgagcaactccagcgatcgattcatattagggatgaggtgcttcaaagcatgcagcagaagcttgatgatctgtttgacgagatgaactccctgcaacagcagtatgtcaagtgcaacaccttcatttcctcggagcagggaaaatctgagttggtgggtagcaagaaggtaggagattatgacggagctagatgctgtgcgtgtgcaaagccagagattgctgctactcctcacaagacaaaggatatctgtggaatggacgatgcaaaatctgatgttgttgataggtccagcgtgagtcatatggaccatgaagagcgccgaatgtcagacctctcagacttttgctggagtgttgtgtcatcggtggataatcatgtaaatggggacaatcagctaagttccctggcggcagaacaggaattgtacaaccttcagaaagaatgcgaagagaaggatgcaatcataaaggaactggctgcaactgcacatacatctagcactgctgatgccaagagaatagcagagctgcaagaaattcttaaaagaaaaaacatggtgatatctaaactgaagaaggacatgtcagctttaaagcagatggttgttgaattaacaagggctaaaagaacatcttctgtcaatttaagtactagctgctctgaactgccagtgatgtcaagtaatgttctttatgatatgagcagcactagcccatcatcatcggattctgagtctcctgtagcaccaagagaataccttgatgatcatcttaaggttgatgatggcattgctggagactctgaatacaagggtagttctagattctcaatggaaagcgcatgttttcccacaaaaaactcatcagctggcaagcttcggtcgactagtccattaaaagagaaccgtatagatccgaatgttgaaacaagtttggtcggtagacagaagcaacgtatatccaccaatggagactttaaaaggactagacggcaaagccagcaagactcaaggaacagagctacaaagagatggatgtag</cdnaseq>

Protein Sequence

<aaseq>MVAAAVGEATPPPGGPPSRVSVSSSSSTPRRRCAALTSRFREPA SPRRHAWVSLQGRLVGAEEATSAASAAPGLPPDEAVAWELFSPLHRVLLVATVAAASS RSHEARRVEQLQRSIHIRDEVLQSMQQKLDDLFDEMNSLQQQYVKCNTFISSEQGKSE LVGSKKVGDYDGARCCACAKPEIAATPHKTKDICGMDDAKSDVVDRSSVSHMDHEERR MSDLSDFCWSVVSSVDNHVNGDNQLSSLAAEQELYNLQKECEEKDAIIKELAATAHTS STADAKRIAELQEILKRKNMVISKLKKDMSALKQMVVELTRAKRTSSVNLSTSCSELP VMSSNVLYDMSSTSPSSSDSESPVAPREYLDDHLKVDDGIAGDSEYKGSSRFSMESAC FPTKNSSAGKLRSTSPLKENRIDPNVETSLVGRQKQRISTNGDFKRTRRQSQQDSRNR ATKRWM</aaseq>

Gene Sequence

<dnaseqindica>1..360#682..894#972..1124#1339..1458#1532..1618#1712..2149#atggtcgccgccgccgtcggcgaggcgacccctccgccgggcgggccaccctcccgcgtgtccgtgtcctcttcttcgtccaccccgcggcgccggtgcgccgccctcacgagccgcttccgcgagccggcgagcccgcggcggcacgcgtgggtgtcgctgcagggccgcctcgtcggcgccgaggaggcgacgtccgccgcctcggccgcgccggggctccctccggatgaggcggtggcgtgggagctcttcagcccgctccaccgcgtgctcctggtcgccaccgtcgcggctgcctcctcccgctcccacgaggcccgccgcgtcgagcaactccagcgatcgattcatattagggtttggttttactgatctcatatatttcgccttatcccagatttattagtcacatagctaatacttaatagattgaagtgttgaacccctttgttgattttagtgatctcatatatactgaagcctgtgtgttcttgtcatttcggccaagtgctatgcgtatatgacttttattatagtacctcgtaggtgattaggttccacttgaatgttgcatattctaatgtttgcggtaatgtgctatatgcacgatatctcggcttttacatgctgttcttgcagccttaagtaatcgtatgaagaaatgtttatggtatgcaggatgaggtgcttcaaagcatgcagcagaagcttgatgatctgtttgacgagatgaactccctgcaacagcagtatgtcaagtgcaacaccttcatttcctcggagcagggaaaatctgagttggtgggtagcaagaaggtaggagattatgacggagctagatgctgtgcgtgtgcaaagccagagattgctgctactcctcacaagacaaaggtattatgtctttacagagagcttgttccatgaggtattttcatctcacttccttttcatatggtggacgagtgcaggatatctgtggaatggacgatgcaaaatctgatgttgttgataggtccagcgtgagtcatatggaccatgaagagcgccgaatgtcagacctctcagacttttgctggagtgttgtgtcatcggtggataatcatgtaaatggggacaatcaggtaaatcctactccattctgtggtgaaagcatcttatttatgcgcaacgtcatcattgttaattgttcatgtacagtttttttttcaatgtacgaattattgatcaacatttcagtattaccttcattatggagcggagtgctttgataaaatctgaacatttctcgtgctttaaatgttgctgactggtgacactctggtcaattgcatccagctaagttccctggcggcagaacaggaattgtacaaccttcagaaagaatgcgaagagaaggatgcaatcataaaggaactggctgcaactgcacatacatctagcactgctgatgccaaggtacaaattgtcgtggtggtatgccaaccatgtgaattatatatacttatgttatccatctgtctatatgcagagaatagcagagctgcaagaaattcttaaaagaaaaaacatggtgatatctaaactgaagaaggacatgtcagctttaaagcagatggtatgtggtccattgctacttacatcttgtgatttttctttgtgtgttctggtaaagttgtaacatgtcttgtttcaatgtttcatactcaaggttgttgaattaacaagggctaaaagaacatcttctgtcaatttaagtactagctgctctgaactgccagtgatgtcaagtaatgttctttatgatatgagcagcactagcccatcatcatcggattctgagtctcctgtagcaccaagagaataccttgatgatcatcttaaggttgatgatggcattgctggagactctgaatacaagggtagttctagattctcaatggaaagcgcatgttttcccacaaaaaactcatcagctggcaagcttcggtcgactagtccattaaaagagaaccgtatagatccgaatgttgaaacaagtttggtcggtagacagaagcaacgtatatccaccaatggagactttaaaaggactagacggcaaagccagcaagactcaaggaacagagctacaaagagatggatgtag</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0488600, RefSeq:Os09g0488600