Difference between revisions of "Os09g0488700"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os09g0488700| Description = Conserved hypothetical protein| Version = NM_001070066.1 GI:115479874 GeneID:4347433| Length = 2824 bp| Definition ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os09g0488700|
 
GeneName = Os09g0488700|

Revision as of 21:01, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0488700

Description

Conserved hypothetical protein

Version

NM_001070066.1 GI:115479874 GeneID:4347433

Length

2824 bp

Definition

Oryza sativa Japonica Group Os09g0488700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:19504003..19506826

Sequence Coding Region

19505333..19505533,19505701..19505928,19506028..19506477

Expression

GEO Profiles:Os09g0488700

Genome Context

<gbrowseImage1> name=NC_008402:19504003..19506826 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:19504003..19506826 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgtgactcgttgcgcatgcccaactccagcagctacctctcgatgctcgtcctccccaaagctctggacctgaattcatgtcgatacgagtcctttgaggacacccttgcccgtgccaacgcgtggatctactcctcgcaggtctcaggaatccccatcgagttcatgaatgtgcagagtgaggctcttctcaccaagatatctggagagacagcgtctgcaactgttaactcaggttctttgtctgatctgtctaacgtcacgaatgcgaccctgtatggttttgaggattaccatggggtagatattggggtggtgaaagcagcccgactttggtacagctccatagcagaagagatgccgctggagattccacttgaagaaggtgacacgaggctaggattcgccatcagccgtactgaagagggttttatcttcatatcttcagtggttgacaatgacaaggacaatgaggcgccatcgacacggtcagggctccgcgatctgttcaaccaggcaagggaggcatcaaaactgctagttatctcaagggtgtccaatgagaaggtccttccctggatgatctccagctcaggagcgatccgctgcttcgacaccatctccctcagccaaaagctttccttgcaccgccttgcggtgcgccccatccagctccacctgctcatgtgggagaaacctagtggtcctgtagaaaggatcattcgctctccgaaacttcccccacaatctgagctacctcaagtaccctggaatctaattgagagcattgaacctagagtagatgttgatgaggactatgtgggggatttgtcatttcggattgatgatctttcagtgggaaccagctgggtgtga</cdnaseq>

Protein Sequence

<aaseq>MRDSLRMPNSSSYLSMLVLPKALDLNSCRYESFEDTLARANAWI YSSQVSGIPIEFMNVQSEALLTKISGETASATVNSGSLSDLSNVTNATLYGFEDYHGV DIGVVKAARLWYSSIAEEMPLEIPLEEGDTRLGFAISRTEEGFIFISSVVDNDKDNEA PSTRSGLRDLFNQAREASKLLVISRVSNEKVLPWMISSSGAIRCFDTISLSQKLSLHR LAVRPIQLHLLMWEKPSGPVERIIRSPKLPPQSELPQVPWNLIESIEPRVDVDEDYVG DLSFRIDDLSVGTSWV</aaseq>

Gene Sequence

<dnaseqindica>1331..1531#1699..1926#2026..2475#gcagtacgtgctgcgttccctgcacgaccccaactacgttcttggcttcgtcgaccgcctcgaaagcgagtgcctcttgttgcaaggtaaactacttcgctcactgctcatcgctctgaaatctgaatagttcatccgttttgccgcgcattttgcaattttgctgttccagacgaattcaaccaaaaaatatattactgtttcaagttgattcaagtatagaaatgttctgccgcttcagctcatccttggtgttatgaactgaacctttttgctgatcaaatcgatttcagagaagttcggtgtgttcatttcattacgagaattttttcttgtgtgtgttcattcaatgtgttggtaaaatataaacaagagtgaaacgaacgaaacaggagtatcaacaagacagatgcggcatttaatcttgttttcattttgtgcctttcttggcctctacatgtgtttttacacctgttgtgaaaaagacaagtttgctgtcaactctttgaggttcaaaacccccaccaagaatattctgataagctgatctttcagcgcgttgttgcaggcctaatttccttgcataagtgtgtgtctttctctcacggagagaaaactaatctgcctgtagttatcaatgataagaacgatagctacatgacaaaagataatggaagcaaagtggaaagaaaatagtgataaagtatgggagaatatggaagacgtttcggaaacaatgtcaggccaattgctttggtagagattggtcgtttgtctagatggtgatcaatttctagatacctcgtaatgttcactcgttttctcaattctcatatccccggggaagatggaatttctatggtggactagactttgtagtcgttataaacagtcatcgtttgtggcctcctgattagttggttcattactgttgggacataactaccgcactcttatctgattaggctggtctggacatatatggcttttgatctacctggctagaagttataactgttagtgccctggtgcaacttttctttgtcaagcatgtgcgttttcctgtagaattcagcgcttctgaacaactggtagatgcttccatccctgactttaagttttaagtaagaaacagataatctatttcgttgtgaacttttgggtaatgaaacatataatctcttttgttgtggttttttggattatctttctatggaaagtatgtgactttcccttgattcatgaaggcactaggagcacaagagtggcatcagccctgagcagggcacaacttcaggatggttatgttgcatacccatgggagaagaagatgcgtgactcgttgcgcatgcccaactccagcagctacctctcgatgctcgtcctccccaaagctctggacctgaattcatgtcgatacgagtcctttgaggacacccttgcccgtgccaacgcgtggatctactcctcgcaggtctcaggaatccccatcgagttcatgaatgtgcagagtgaggctcttctcaccaaggtgcagatacaatctccctgcttcaggctttttgcagcctaaatttcctgttgcttaactgaaccttcagtagattgaacctgagtatgaacataaaaccccagataagagttgatttggttaactctacttattaagatgtgatctttgcacttcaaaatgtacagatatctggagagacagcgtctgcaactgttaactcaggttctttgtctgatctgtctaacgtcacgaatgcgaccctgtatggttttgaggattaccatggggtagatattggggtggtgaaagcagcccgactttggtacagctccatagcagaagagatgccgctggagattccacttgaagaaggtgacacgaggctaggattcgccatcagccgtactgaagaggtactttgtcacttgacactgtacacaatgccgacaatagtgtacctgaacaattagaactacacatggaacacactgtgacacatttctttctggcagggttttatcttcatatcttcagtggttgacaatgacaaggacaatgaggcgccatcgacacggtcagggctccgcgatctgttcaaccaggcaagggaggcatcaaaactgctagttatctcaagggtgtccaatgagaaggtccttccctggatgatctccagctcaggagcgatccgctgcttcgacaccatctccctcagccaaaagctttccttgcaccgccttgcggtgcgccccatccagctccacctgctcatgtgggagaaacctagtggtcctgtagaaaggatcattcgctctccgaaacttcccccacaatctgagctacctcaagtaccctggaatctaattgagagcattgaacctagagtagatgttgatgaggactatgtgggggatttgtcatttcggattgatgatctttcagtgggaaccagctgggtgtgatcctttcatgctgcaagcttctaatgtgcatatgtatgtcttcatttacatagttctcttgggcagtatgctcagttttgttccatttaagtgtagaagcctggctagaaatgtccagagccttactaggtttctggatataccaagggcgaggctttcataacatctgaaacattatgttgtgatgcaatgtttttgttgatcatagcataccattggaggaatacataagcatttcaataattatctaaggattatcccaattatgggcctgttaagttactcccaaacatattgttcaacactgacatttctgtactttgtactgaacataaagtttgttacactt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0488700, RefSeq:Os09g0488700