Difference between revisions of "Os09g0501600"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os09g0501600| Description = Similar to MYC1| Version = NM_001070117.1 GI:115479976 GeneID:4347486| Length = 2177 bp| Definition = Oryza sativa ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os09g0501600|
 
GeneName = Os09g0501600|

Revision as of 21:01, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0501600

Description

Similar to MYC1

Version

NM_001070117.1 GI:115479976 GeneID:4347486

Length

2177 bp

Definition

Oryza sativa Japonica Group Os09g0501600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:20059925..20062101

Sequence Coding Region

20060257..20060297,20060383..20060467,20060564..20060758,20060844..20060918,20061002..20061070
,20061165..20061230,20061319..20061534,20061627..20061980

Expression

GEO Profiles:Os09g0501600

Genome Context

<gbrowseImage1> name=NC_008402:20059925..20062101 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:20059925..20062101 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacagcgactacgttgccggccttctcatgagcgccgccgccgcggggctcgacctcggtgtgctcgacggcggcggtggcgctttcttggagacgctgtgcggcgggcccggcttcgcggagcgggcggcgaggttgtgcggcggcggagctgggctcttcgggctgcctgcggtggggaacgccgagcgcggcggctgctcgagggaaggctcgtcggtgtccgaccctgcgtgggcgcacgccaccggcggcggcggcgacaatgccaggaagaggaaagctccggcgagcgccgccgccgggaaggacaaggacgccgtcgtgggcggcggcagcagcccgtgcgaggttggagaggcgaaggcgccggactccaagaaatgcaaagcggaggtgaatcccaaggtggaagaagccgccagcgatggctcggtgggagacagagtgcagaagcaaggaaaggggaagaactcatccaagccggccgccgagccgcccaaggactacgtccatgtccgggcacggcgaggtcaggccactgacagccacagccttgcagagagggttagaagagagaagattagccagcggatgaaagtgcttcaggacctggtgcctggatgcaacaaggtggttggcaaggcactcatgcttgatgagatcataaactacgtgcaatcgttgcagcagcaggtcgagttcctgtccatgaagctcgcgaccgtgaatccgcagctcgactttggcaacctatctacactcttacagaaagatatgttccaatcttgtggcccttcggtgaattccgtatttcctttggaaagtgccggtacagcttttccattttgtgaccaagcagattttttccagtcatttggtctgggagccatggaaaaccaatgtagcctagatctggcaaacacagctctaccccacacagggagcacacagtatgcttttcagaagcagcaaagggatctctgggaggataatactttccagtataacgacgaacaaagccaggaggatgcggtttctgcaccgaatttcgatggtcagttgcaagcagcagatcacacagagatcgagttctag</cdnaseq>

Protein Sequence

<aaseq>MDSDYVAGLLMSAAAAGLDLGVLDGGGGAFLETLCGGPGFAERA ARLCGGGAGLFGLPAVGNAERGGCSREGSSVSDPAWAHATGGGGDNARKRKAPASAAA GKDKDAVVGGGSSPCEVGEAKAPDSKKCKAEVNPKVEEAASDGSVGDRVQKQGKGKNS SKPAAEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKVLQDLVPGCNKVVGKAL MLDEIINYVQSLQQQVEFLSMKLATVNPQLDFGNLSTLLQKDMFQSCGPSVNSVFPLE SAGTAFPFCDQADFFQSFGLGAMENQCSLDLANTALPHTGSTQYAFQKQQRDLWEDNT FQYNDEQSQEDAVSAPNFDGQLQAADHTEIEF</aaseq>

Gene Sequence

<dnaseqindica>1805..1845#1635..1719#1344..1538#1184..1258#1032..1100#872..937#568..783#122..475#acctacctaccgtctcctccattggactagctcctctctcccaattccactcctcgcttctcgcgcaattcttgcgggtttgtgttttttttttcttcttcttcttttggtttcttgatcgatggacagcgactacgttgccggccttctcatgagcgccgccgccgcggggctcgacctcggtgtgctcgacggcggcggtggcgctttcttggagacgctgtgcggcgggcccggcttcgcggagcgggcggcgaggttgtgcggcggcggagctgggctcttcgggctgcctgcggtggggaacgccgagcgcggcggctgctcgagggaaggctcgtcggtgtccgaccctgcgtgggcgcacgccaccggcggcggcggcgacaatgccaggaagaggaaagctccggcgagcgccgccgccgggaaggacaaggacgccgtcgtgggcggcggcagcagcccgtgcgaggtgggtcgagctcagctacagcgaattccaccatggagtgactgatcttgatgctgaacatgtcccgctccatttcttctttgggtttacaggttggagaggcgaaggcgccggactccaagaaatgcaaagcggaggtgaatcccaaggtggaagaagccgccagcgatggctcggtgggagacagagtgcagaagcaaggaaaggggaagaactcatccaagccggccgccgagccgcccaaggactacgtccatgtccgggcacggcgaggtcaggccactgacagccacagccttgcagagagggtaacaaagcacactgaaatctgtacaaatccatgtcaaatttgggggttgagtggaaattcacacactgtgctttgtggtttgataggttagaagagagaagattagccagcggatgaaagtgcttcaggacctggtgcctggatgcaacaaggtatcatcagattcctgaacgataaactgtcgcgccgaagtttcagttggtaccctatgtgttggctaatttgaagagattatccttgttttaggtggttggcaaggcactcatgcttgatgagatcataaactacgtgcaatcgttgcagcagcaggtcgaggttaggacacagccaaaacatttggttatgttgcttggtcagattatgaaaactctgatagtaacaatttggtaccatttcagttcctgtccatgaagctcgcgaccgtgaatccgcagctcgactttggcaacctatctacactcttacagaaagatgtgagctttgagttatcccaattcgcgtgcttcgggtccattagcaatatgctcctaacacgcaatttttctttgtaaaatccagatgttccaatcttgtggcccttcggtgaattccgtatttcctttggaaagtgccggtacagcttttccattttgtgaccaagcagattttttccagtcatttggtctgggagccatggaaaaccaatgtagcctagatctggcaaacacagctctaccccacacagggagcacacagtatgcttttcagaagcaggtgattgctgccttaaaaaacttgcaatctacggaacagatggtattaacatgcatatatgatgataacactgtttgcctttggttttcttttcagcaaagggatctctgggaggataatactttccagtataacgacgaacaaagccaggaggatgcggtttctgcaccgaatttcgatggttcgtgtaattgattatgttcacttgtattgcatgccttgttcagtatgatagactgatagcctgtatggatcaattgacacaggtcagttgcaagcagcagatcacacagagatcgagttctagatgatcaatgataacagccaatgatttttgtacatagaaagcatgaaaccagttgcaaagtgaagctcctaagctaactgttcttcgaaatttaggcccgagggaactgattcatttttcatatgctggatgtacggctacttgattcttctcatatttgtgagacaaatatgatctacaaaatagtaggttatgtactagatatggtgcaaatattacaagcaccatctctcttccagtatgtacgagccggctggtaatagcctggtattgccatgatacagtgtactgttgattttgtcttgaaatgaaaaggtatgtgctatttcaac</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0501600, RefSeq:Os09g0501600