Difference between revisions of "Os09g0506800"

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(Created page with "{{JaponicaGene| GeneName = Os09g0506800| Description = Similar to Meiotic asynaptic mutant 1| Version = NM_001070145.1 GI:115480032 GeneID:4347514| Length = 8039 bp| Defi...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os09g0506800|
 
GeneName = Os09g0506800|

Revision as of 21:02, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0506800

Description

Similar to Meiotic asynaptic mutant 1

Version

NM_001070145.1 GI:115480032 GeneID:4347514

Length

8039 bp

Definition

Oryza sativa Japonica Group Os09g0506800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:20274353..20282391

Sequence Coding Region

20274455..20274457,20274533..20274589,20277353..20277449,20277542..20277610,20277694..20277786
,20277902..20278025,20278612..20278681,20278754..20278795,20278953..20279081
,20279176..20279283,20279437..20279479,20279548..20279586,20279784..20279908
,20280105..20280117,20280212..20280282,20280374..20280478,20280557..20280707
,20281223..20281308,20281416..20281470,20281567..20281736,20281868..20281981
,20282100..20282165

Expression

GEO Profiles:Os09g0506800

Genome Context

<gbrowseImage1> name=NC_008402:20274353..20282391 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:20274353..20282391 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgatggctcagaagacgaaggaggcggagatcacggagcaggattcgctgcttctgacaaggaatttgctccgcattgctatatacaacatcagctacatcagaggtctattccctgagaagtacttcaatgataagtcggttccggcactagagatgaagattaagaagctaatgcccatggatactgagtcgaggaggttgattgattggatggaaaaaggtgtctatgatgcactacagaagaaatatctcaagacccttctcttctgcatctgtgagaaggaggaaggcccaatgattgaggagtatgcattctcatttagctaccccaacacgagcggtgatgaagttgcaatgaacttgagccgcacagggagcaagaaaaacagtgctacatttaaatcaaatgcagcagaagtcactcctgatcagatgaggagctctgcttgtaagatgataagaacactggtttcacttatgaggaccttggaccaaatgccagaggagaggaccattctaatgaagctgctatactacgatgatgtcacacctgaagattacgagccacccttttttaagtgttgcgctgacaacgaggccataaatatatggaacaagaaccccttgaagatggaagttggaaatgtcaatagcaagcatctcgtgttagctttgaaggtcaagagtgtccttgacccttgtgatgataacaatgtcaacagtgaagatgataatatgagcttggataatgaatctgaccaagataatgatttttctgacactgaggttcgcccatctgaagcagagcgttacattgttgctccaaatgatgggacttgcaaaggtcaaaatggtacaatctcagaagatgatactcaagatcctgttcacgaggaagagctaacagctcaagtaagagagtggatatgctcaagagacactgaaagtcttgaggtttcagatgtccttgttaatttccccgacatatcaatggaaatggttgaagatattatggagaggctacttaaagatggtttactatccagagcaaaaaaggatagttattctgttaataagattgctgatcctacaacaccacacataaagaaagaggtcatcatgcaaaatgtctcacctactgaaggaactaaaaatagcaatggtgatctgatgtatatgaaggcactgtaccatgcacttccaatggattatgtgtcagtaggcaaacttcatggcaagctagatggggaggccagccagaacatggttcgtaagttgattgaaaaaatggtgcaagacggatatgtcaagaattcagccaaccgaagactaggcaaagctgtcattcattctgaagtcaccaacagaaagctccttgagataaaaaagattctggaagtcgatatagccgaacaaatggccattgataccaatgcagaacctggtgagcctgagcgcaaagaccacctgagtggccatgaaatgagagatggatcgacgatgggttgcctccagtccgtcggatctgacctcacccgcacccgggagcttccggagccgcagcagaacgtgtccatgcagagcgggcaggaagcttccacggtggataaggatccaagcaggactcctacaagcgtgcgcgaggcgtccgtttgttccctggagagtggggttctcgggcagaaggtcagaaagtctttggctggtgctggcgggacgcagtgctcgcaggacaagcgattcaggaaggccagcacggtgaaggagccgatcctccagtacgtcaagcgccagaagtcccaagttcaagttcaagttcagtga</cdnaseq>

Protein Sequence

<aaseq>MVMAQKTKEAEITEQDSLLLTRNLLRIAIYNISYIRGLFPEKYF NDKSVPALEMKIKKLMPMDTESRRLIDWMEKGVYDALQKKYLKTLLFCICEKEEGPMI EEYAFSFSYPNTSGDEVAMNLSRTGSKKNSATFKSNAAEVTPDQMRSSACKMIRTLVS LMRTLDQMPEERTILMKLLYYDDVTPEDYEPPFFKCCADNEAINIWNKNPLKMEVGNV NSKHLVLALKVKSVLDPCDDNNVNSEDDNMSLDNESDQDNDFSDTEVRPSEAERYIVA PNDGTCKGQNGTISEDDTQDPVHEEELTAQVREWICSRDTESLEVSDVLVNFPDISME MVEDIMERLLKDGLLSRAKKDSYSVNKIADPTTPHIKKEVIMQNVSPTEGTKNSNGDL MYMKALYHALPMDYVSVGKLHGKLDGEASQNMVRKLIEKMVQDGYVKNSANRRLGKAV IHSEVTNRKLLEIKKILEVDIAEQMAIDTNAEPGEPERKDHLSGHEMRDGSTMGCLQS VGSDLTRTRELPEPQQNVSMQSGQEASTVDKDPSRTPTSVREASVCSLESGVLGQKVR KSLAGAGGTQCSQDKRFRKASTVKEPILQYVKRQKSQVQVQVQ</aaseq>

Gene Sequence

<dnaseqindica>103..105#181..237#3001..3097#3190..3258#3342..3434#3550..3673#4260..4329#4402..4443#4601..4729#4824..4931#5085..5127#5196..5234#5432..5556#5753..5765#5860..5930#6022..6126#6205..6355#6871..6956#7064..7118#7215..7384#7516..7629#7748..7813#aaagccccgcaaattctctcgctctctctctctctctctctcccactcctctcccctctcccttctctcatctcgcgcgcggcgcgccgccgtagagacgaaatggtgggttctcgcttcgatttcgcgttgcgcttgctggtgtgtgcgtgctgatcggagtgggtgattgcgatgcaggtgatggctcagaagacgaaggaggcggagatcacggagcaggattcgctgcttctggtgagtttttttttctctcctcgcccatctcctgttcgattcccgtgcgactttcgatttcggtggttcggtgccggacatcggatcggttcacccgatcgagggttttctgccgaggtttttgggaggtttttcgctgtggatttgatcgctcgtgtggtgtactggggtttgcagtagctggcgttcgatttgggtttgattcgagtgttggtggtcacgcgtgtcggatttcccccccccccccactttgcgagtgcttttgggtggaattaactgttgctttgctgattttaaccgatttctcgtgcggattttggatgtgtttggagatcgtcgtggggttttgggtttctcgctttctctggtagtctccgtccgctgactaccaaatggtgctagttgggcggccagtgcgaagcatcagtagcatctcactttgctagtgtttttgggtggatttcattggtgctttgcagattttaaccgatttctcgtgcggatttaggcgtgtttggagcatgagtcctgggatttttgtttcacttcctctggtgctctccgcccgttcaaaagcttctgggtatctcagattggagttggtttctggtttctccgtgtagcactatctctcgaatgcgtaactgatggatcgtttcggtatcgcactgaatgatgattcggtggtttttctccctgctgcttgatcgatgtgagttttgtttctctggtttgaggcaccgaatctgttctcgtgaaaattttttgacataatgttctcgtgaaaaatctctggttggtttgctaaatttcgcagaaattttgagcagaatttctactggtttgtgcgattctctcagcattagaattttgttgaacggatcacatcactttgttttgctactcgcgtggtgattcggttgggatttcaaggagacattcactggtttgataatcgcgtttcgatttggtttcgttgtgatacccacaggcatttgcctgattgtttgtgcgtagaccatcgtgctggaaacataggcgcatagtctctgcagtctgcgtagttgatcaaattggtagggttgaaagtttttttccctggcttagatatccttgcgaagaatttcgaattcaagtcgtgttgtttcgaactgtttcgccagaagcatctaaggaattgttcagttcgttgaacttctcatgtgctttgcgtttggaatctcttctgaagtgttttgggagcagcagttacagtgagtaacttcattttgcttccgaaatgcttgcttgaacatggaatcgagacacgactcgtattggcctgggcctggttgttcaggatttccatttctgacagtcgtatgagtcgattttttcaaatgtttccagtaggcttgttagttgtttgggttttgaacaaacgttgcctaccttggttggaattctaggagacattcgctggtttgataatcccgtttcgtttttgtttcgttgtgaaacccacgagcattggcctgatgatttgtgcgtagatgattatatgctggaatcatgggtgcataccccccacggttcactgaatcgatcaaattggcagggcctaaaaaggttttttccttgcttccatagccttgtgaagagtttctacttccaatcgttttgaatcatattgttagaagcatctaaaatttattcagttcgttgaattcttgctgtgcttgcttttggtatctctttagacttcagagtttttttggcagcagcagattccatgagtaattttagtttctcttttcaaacttgttgcttggacgtggaattgagacaccacagtaccacacgtattggtttggttattcccagatttcctgttctgatagttctatgacctaattcttcttctgttttttaaaatatttccgatacactactttgggtttgaacagacatttgcttaatcctgcattagtttgtgataagaaaagctgcacttctgtttataatcggttattttgttgcgctatcatttgaatttggaatttatgttatgcctttaggaattatatgccagcttattaaacctctgctggcatgatttttagactagcccccactctcactcctattttaacatctttgttagatactcggtttaataagtggacattggctttgccacatgagttttaggattactggttgatcaccaaactttggtacctcttgtactttcaaaaaaccagttggtttatatccaatcaaataatgtttttctttgtcttttctagtacttgtttgctcacatggtcagctgcactttgcctagaagtgcttaggatcccatgactgcaagtgcatagtaggtgaaatatatcgtatggtccatgttcatttatgcatttgttaagaaatttattgcaggtgtgtgtttgaatgggactggtaccctatttgattcaacatgtgctaaagtattgaaaagcatgacacatttgttgtttggtgaacttttgtgcctcaccttgtttggcaagcccaaaaccctgggccatgctccaggatgggctaggaaactgaactacaatttcagtccatccctgggggtggaccaggatccaataaggcctaaacttgttaatcagtaatccaatttgtgatgattttattgcccttctatttctattacattgaatactgaactctctttgaattatgtatggtagaacgctattgtgataacgtggtgatattttgaccaaacagacaaggaatttgctccgcattgctatatacaacatcagctacatcagaggtctattccctgagaagtacttcaatgataagtcggttccggcactaggtcacattacctatagtccctaacccttttatacaccaaattcctcagatgatatgatattattagctggaacacccttttatttattgcagagatgaagattaagaagctaatgcccatggatactgagtcgaggaggttgattgattggatggaaaaaggtgaaaatatgtcctgttttacgtgttaaatctttttaattttccaatttgttcatttaatccatttttgtgataaattttaggtgtctatgatgcactacagaagaaatatctcaagacccttctcttctgcatctgtgagaaggaggaaggcccaatgattgaggagtatgcatgtgagtattaccatgtgaaatatggctaacttctagcatacaaagttggttttacatcagtgattgtgggtcatatgtcaaacattttcttattctgtgtcaaactcccctgcagtctcatttagctaccccaacacgagcggtgatgaagttgcaatgaacttgagccgcacagggagcaagaaaaacagtgctacatttaaatcaaatgcagcagaagtcactcctgatcagatgaggttctctcatacatatcccttttaaaggctatgattcattctagacttctagttagttatccatgctgcttagctaaatgctacgatttaatggttaatttttcatattgcttagcattatacattttggagagtgtttgtttaatgaagttgcagtcccaacataacaatagtttaaaattttatgatttcaaagaagtaggagcaaattgatgactaaaaggagttcagattttctttttctatgtaaggaatgtggtgaaaaagtgaggtacatagattccagtaactttgtaaatttaggtacataggactgtgaggtggcaataaatgatgtaaatcctttttaaaaacatagttgggcttataattttgagtccaacttttctgcgagttgttcttaaatattcttccacaacttgcagaattctagttctgaaggtatggtttcaatttagtcctttagataagctcattaatggttgtttattggtttttatatgtgtatggcaattgcaaagtaattattgtaagctttaactagtcactgctgatatcctgacatgatcatatggttcccaatcaggagctctgcttgtaagatgataagaacactggtttcacttatgaggaccttggaccaaatgccagaggaggtaatttttgcacttcacagatttgttacaatggattgaacttacctaatgctatcctgtatttgtcctcagaggaccattctaatgaagctgctatactacgatgatgtcacagtgagtgcagcaatttgttcttgctatttactgaaacttgaagccgccataatagataattatttttgctctgaacaaatgaaggattcaaccttttctgttctatagaactttgttcgtggaatcgaaaacagttaatttattatgctatttgcagcctgaagattacgagccacccttttttaagtgttgcgctgacaacgaggccataaatatatggaacaagaaccccttgaagatggaagttggaaatgtcaatagcaagcatctcgtgttagctttgaaggtagtggattatggagatagcagtcgtttggaccaggaaacctctgttttctcaattaaactcattgctacatatgtttttattctttatgcaggtcaagagtgtccttgacccttgtgatgataacaatgtcaacagtgaagatgataatatgagcttggataatgaatctgaccaagataatgatttttctgacactgaggtaaagacctaagagaacatataattgagcatctttattagtgagattctcttaattttctccttagtgtgctgtgatgccacctttcgatgtatacgcatatttttgtcttccttttacctgtagtatagactgaatcgctaattctattaggttcgcccatctgaagcagagcgttacattgttgctccaaatggtaaagtttctttgtttgtattcttgttgtactttctgtttttggtgctaacatacttatcaaaatagatgggacttgcaaaggtcaaaatggtacaatctcagaaggtcagttaatttgatctgagagcttcatctgtgcatccttttccatacaaatgaattttatgtcaactattaagttattattcaaatgtttggatgctcatttaatttttcatgaagtgtgcaatacatgttcaacattctctgactctgtagtacctgaaaatttcatacgtttctctgactttgtatgtttgcagatgatactcaagatcctgttcacgaggaagagctaacagctcaagtaagagagtggatatgctcaagagacactgaaagtcttgaggtttcagatgtccttgttaatttccccgacatatcaatggtaatgcctactggtatttcatttatataataaaatagctatttagagtatttactgttttgtgctagacttacaagtaggtcacaaacttttacccgcttttatgtcatcagtgtttataaatcaaacaatatcttgatatactgtatgagctgtatggctggctattaacaatatcttgttgaatgctttgcaggaaatggttgaaggtagtggtgtgaaaaacttatgtgtgcttaccaggcattctttcttcactctcactaaagccttgaaatacttgactaatgactcacttttcagatattatggagaggctacttaaagatggtttactatccagagcaaaaaaggatagttattctgttaataaggtcaaccaaacattttcttcatgtgctatattttagttttaccctgtggcatattgtactgtccatcactagcatcatagagtggcttcagattgctgatcctacaacaccacacataaagaaagaggtcatcatgcaaaatgtctcacctactgaaggaactaaaaatagcaatggtgatctgatgtatatgaaggtgtatctctgtcgcttacccttggcttgtatttggaggtcatcatgtcatttctgctgatatatatcgttgctacaggcactgtaccatgcacttccaatggattatgtgtcagtaggcaaacttcatggcaagctagatggggaggccagccagaacatggttcgtaagttgattgaaaaaatggtgcaagacggatatgtcaagaattcagccaaccgaagactaggtaacaccttgaactaatctcttgcaaaatctcaaatgcttctattctatggtacattatttacttttctggtttagtctgtcagccaggagcaagttatgtattgtttgctcaattctgttacaactgtgaaaggagaataactgaatcaacatgccaactgagtgtcattttctacatagattgtgcaacttcaagtgattaccttttgtcatgttcacttattatatgaagaactgtcaacaacttctcttgaagaaggattttggatgcctcatgaaaaacattgtctaactgtaatacttgtgaagaatatacatgtactgaagctgttgctgctttagatgaaaactaatgattttaggaacttcagatacatcactcttatcttttcagattgaccattgccgccatgcattgtactaatagaactagtactaatctttgagcaaatgactgattcactactactgtgcaccataccatcttatggcctatgtcactctattttacaggcaaagctgtcattcattctgaagtcaccaacagaaagctccttgagataaaaaagattctggaagtcgatatagccgaacaaatggtaccataatcatatctaacagcaccaagtttttatctagtaattctttgcattccacaacattcattttattcatggttaatctgaaactctgcttcatcatgcaggccattgataccaatgcagaacctggtgagcctgagcgcaaagaccacctgagtggtaatggcaacaacaatccgcatctccatggacttggcatctgtctttgcgtatatagtactaacatgacattgtccaatatgtttctctttataggccatgaaatgagagatggatcgacgatgggttgcctccagtccgtcggatctgacctcacccgcacccgggagcttccggagccgcagcagaacgtgtccatgcagagcgggcaggaagcttccacggtggataaggatccaagcaggactcctacaagcgtgcgcgaggtataaccgaaacctgatcccctactaaccacagacgattctgagccatatgcgactcagaatccaggtaaattaaatcacagacaaacgtagagctgaaggtgatgaactgtgtgatacctttgcagcaggcgtccgtttgttccctggagagtggggttctcgggcagaaggtcagaaagtctttggctggtgctggcgggacgcagtgctcgcaggacaagcgattcaggaaggccagcacggtaaactctccatgtcccaactctgaactgaaacatctggcatttggcatgtactagtatttggcatttggcgctgtaatcaagttgagtttaattgatcccgtgaaaatgaccgcaggtgaaggagccgatcctccagtacgtcaagcgccagaagtcccaagttcaagttcaagttcagtgagggttcgtgtcgcaagcgtcaggagcaactaacatcgtagttcaggtgcagaagaccacaagtagatatatccatcctattcctagttccggtgctcaagtttgtgcagatagtcagagagcactcacgcacacgtagatatctgtccatgccgctgtcccaaatggcaaatggagatagacgctactatgtgctaacacacactcaaattaagcattcaaaacgc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0506800, RefSeq:Os09g0506800