Difference between revisions of "Os09g0515800"

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(Created page with "{{JaponicaGene| GeneName = Os09g0515800| Description = RabGAP/TBC domain containing protein| Version = NM_001070204.1 GI:115480150 GeneID:4347577| Length = 3946 bp| Defin...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os09g0515800|
 
GeneName = Os09g0515800|

Revision as of 21:02, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0515800

Description

RabGAP/TBC domain containing protein

Version

NM_001070204.1 GI:115480150 GeneID:4347577

Length

3946 bp

Definition

Oryza sativa Japonica Group Os09g0515800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:20740255..20744200

Sequence Coding Region

20740453..20740614,20740780..20740881,20740954..20741039,20741363..20741634,20742138..20742229
,20742323..20742460,20742537..20742607,20742914..20743097,20743175..20743307
,20743689..20743783

Expression

GEO Profiles:Os09g0515800

Genome Context

<gbrowseImage1> name=NC_008402:20740255..20744200 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:20740255..20744200 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagcggcggcggcggaggaggcggaggcggaggaggaggaagccccaacaacacggaatggcgcttcaaccagacgctccgcaacgtgcaaggaatgctcaaagggcggagctttcctgggaaggtcttgctgacccgaagatcagaacctctttcacctcctgaatactccccgcgctatgagaatgatcgtgatgaatacgaacagaatgaaggctcacaagaaggaaaagggcaagcatctggaaacacagctgatagtatgagtgcaaagaaatcaaatcctccatcaacaagtagcaccaattcattaccagatgcccaaggattagtttctggggctagagctacagattctgcacgaattgctaaattcacgaacgaactatctaggccagctgttatattagacaagttgcgggaactgtcttggagtggtgttccaccttatatgcgacctaatatatggagacttcttctgggatatgcaccacctaatgcagatagaagagaaggtgttctgacgaggaaaagacttgagtacgttgaatgtgtttctcaatactatgatattcctgatactgaacgctctgatgaagagattaatatgcttcgacagattgctgttgattgcccaagaactgtgccagatgttacctttttccagcaccctcaaattcagaaatctctggagcgcattttgtatacatgggccatccgtcatccagcaagtggttatgttcaaggaataaacgaccttcttacaccattcttggtcgtattcttatcagagcatctagagggcaacatggacacctggtccatggaaaagctttctccacaggatgtttctaatattgaagcggactgttattggtgtctttcaaagtttctcgatggtatgcaagaccattacacctttgctcaaccaggaattcagcgccttgttttcaggttgaaagaacttgttcatcgtatagatgaacctgtgtcaaagcacatggaggaacaaggattggactttcttcagtttgcgtttcgttggttcaattgtcttatgattcgtgagattccttttcatcttgtaacacgcttgtgggatacctaccttgctgaaggcgattatctaccggattttcttgtatatatatcagctagctttttgttaacgtggtcagacaagctgaagaaacttgattttcaagagatggtcatgttccttcagcaccttccgacgaggaactgggctcaccatgagcttgagatggtgctctccagggcttacatgtggcacacaatgttcaaaagctcgccaagtcacctcgccagctag</cdnaseq>

Protein Sequence

<aaseq>MSGGGGGGGGGGGGSPNNTEWRFNQTLRNVQGMLKGRSFPGKVL LTRRSEPLSPPEYSPRYENDRDEYEQNEGSQEGKGQASGNTADSMSAKKSNPPSTSST NSLPDAQGLVSGARATDSARIAKFTNELSRPAVILDKLRELSWSGVPPYMRPNIWRLL LGYAPPNADRREGVLTRKRLEYVECVSQYYDIPDTERSDEEINMLRQIAVDCPRTVPD VTFFQHPQIQKSLERILYTWAIRHPASGYVQGINDLLTPFLVVFLSEHLEGNMDTWSM EKLSPQDVSNIEADCYWCLSKFLDGMQDHYTFAQPGIQRLVFRLKELVHRIDEPVSKH MEEQGLDFLQFAFRWFNCLMIREIPFHLVTRLWDTYLAEGDYLPDFLVYISASFLLTW SDKLKKLDFQEMVMFLQHLPTRNWAHHELEMVLSRAYMWHTMFKSSPSHLAS</aaseq>

Gene Sequence

<dnaseqindica>3587..3748#3320..3421#3162..3247#2567..2838#1972..2063#1741..1878#1594..1664#1104..1287#894..1026#418..512#cgagtcctcgtgatccatcctccccgacagatcgatccaattcgcatcatcgcatcacacacctcctcctcctcctcctccccccgcgccgccgtcatccgcggccttaccggcgaccgacgcggccgccgcgtcgccctcccgccgccgccgccgccgcctccgacgacgggtttccaaacggatccggtggaattccatccctctcgagcttagcgaggggggagagagaagaggaagaaagtgaggggaaaaaagcttcacaagaatacgcgcaccacgcatggggatccgagtcgggaggtagacggaggggcgagatccggcgaggcggagagcgggaggggattgtcgcgtggtttttggttgctcccccctaccgccagctccggcgatcccgaccacccaccggcgacgatgagcggcggcggcggaggaggcggaggcggaggaggaggaagccccaacaacacggaatggcgcttcaaccagacgctccgcaacgtgcaagggtgagccccttctctcgtcccctctgagctcccatcacgatccgattcctttgaaatggtatgcatgctggtctgcttggtgcgaagctgcgtgaaagtcagagcttccgtgtagattcgggtggatcctggtgcattctagagcggtggatctgggaattttcagagtattgcgagttacatggctgtctagtgttagagaatgtttcttggttaggtgaacttattctgaataaatccaatatctttttgctagaaatacttattttttttgtctaaacggtattccacatagtatgattatagattataatcgtactctgtggaacattacaatggagctttattgtatcccctttttccccttatatgttttgtcagaatgctcaaagggcggagctttcctgggaaggtcttgctgacccgaagatcagaacctctttcacctcctgaatactccccgcgctatgagaatgatcgtgatgaatacgaacagaatgaaggctcacaagaagtaatgtggcattggttggcatcgctttcagcttgtaaacaagttagtttgtaattgatgaacttcattttatacagggaaaagggcaagcatctggaaacacagctgatagtatgagtgcaaagaaatcaaatcctccatcaacaagtagcaccaattcattaccagatgcccaaggattagtttctggggctagagctacagattctgcacgaattgctaaattcacgaacgaactatctaggccagctgttatattaggtatgcctattttctgtacagggttgattaaatcatctgttgggtgtacaataattttggtttagcaatcaatgtttcgattattttcttgtcattttctttttcatcattgtcactgccaagatggatggaaaagggtataaactttatgtagggtgacaatcttgtgtcttgtgagttgttgcccctgtattttgttgcagcttgttcattctgaaaaatatttgcagtttctctgattcttctaggttccattagcttgtccagaattcagttgaaacccactgtttgttcttaattttttagacaagttgcgggaactgtcttggagtggtgttccaccttatatgcgacctaatatatggagacttcttctggtgagcttatttcaagacatgtttcaatccttttaataggtgttcctgtttcgaatttaatgtcagctggctacagggatatgcaccacctaatgcagatagaagagaaggtgttctgacgaggaaaagacttgagtacgttgaatgtgtttctcaatactatgatattcctgatactgaacgctctgatgaagagattaatatgcttcgacaggtttcccctgactttttcgactttgaatttgcctttttaggttccccaatagttcatgtaatcaattatataaactcatggtttcacttgtagattgctgttgattgcccaagaactgtgccagatgttacctttttccagcaccctcaaattcagaaatctctggagcgcattttgtatacatggtgagtcaccgccctttgctggttcattttgatttgtcagaatccttgtttaacacacaatctagctaagaaaacatgacatttttccatgatgcacaattcctgcttgtgctactccccttgtggttccctatgcagaacatacacgtttgtgaacctctcatagttaacctggcactgtttcatcattctagagggaaaatgtgataaatgggtggagtttgcatgatacatgacttgtcatctctgatgactagttcaaatttcccaagttggtctaataaggtgtttaggttatgtttgatatacattgtgttgatatcagtacaaggtgcctgttcttttggcagttatgcttgttccatcagttccacattagtgttctcttccaagttccaacaaggatcaattatgttggcatcaacacaatgccgccaccactacctacaattgtttgtttcttttctgtattattccgtgatacagtgactcaccatttccagggccatccgtcatccagcaagtggttatgttcaaggaataaacgaccttcttacaccattcttggtcgtattcttatcagagcatctagagggcaacatggacacctggtccatggaaaagctttctccacaggatgtttctaatattgaagcggactgttattggtgtctttcaaagtttctcgatggtatgcaagaccattacacctttgctcaaccaggaattcagcgccttgttttcaggttgaaagaacttgttcatcgtatagatggtaatgttcctccaattcaaatatttatgaacctgttctattgctagaattatatctactgaaagaaagggaacttaaggatttagaggactattacaaggggatggataataataggcgtatagaacagttcaatgtgctctacattataattagatctgtgcattatgaactgcactgttcactgtcactaagcttgtctttcttgagatctgttgtagtacagaatagttatgtgttgtttgtagaagaaaaaaagaacagttttgcctagtacattaaaattccaatgtttaaccatctggcatcttctggttatacagaacctgtgtcaaagcacatggaggaacaaggattggactttcttcagtttgcgtttcgttggttcaattgtcttatgattcgtgaggtcagcgttgtaaaggcctgttgcttagatgtgatctatatattgttgctaatatgtctcatatccttgtagattccttttcatcttgtaacacgcttgtgggatacctaccttgctgaaggcgattatctaccggattttcttgtatatatatcagctagctttttgttaacggtaagttgaagtaccccttgactgttcataattatttttttcaacttcagtgtatgcaagtgttgcatgcctggtgcaggcaaatgcagttttcacaatgtttctggtgtaaatactaatgtccaagtccattgtaattaagttctctctttatttctacctcagtggtcagacaagctgaagaaacttgattttcaagagatggtcatgttccttcagcaccttccgacgaggaactgggctcaccatgagcttgagatggtgctctccagggcttacatgtggcacacaatgttcaaaagctcgccaagtcacctcgccagctaggatacccgataatcatatctgtaatctatgacctgattttgatgtactctagacttgtcccctttggggaaggaaccatgaggagacttcttttgttttcagtgcatactatcaattgtaacactacccccaatctgtatattttacttacagattattatcaatgatgatgaatagatggcattcaatttgtgtatt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0515800, RefSeq:Os09g0515800