Difference between revisions of "Os09g0527500"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os09g0527500| Description = Similar to MEG5| Version = NM_001070265.1 GI:115480272 GeneID:4347641| Length = 3812 bp| Definition = Oryza sativa ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os09g0527500|
 
GeneName = Os09g0527500|

Revision as of 21:02, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0527500

Description

Similar to MEG5

Version

NM_001070265.1 GI:115480272 GeneID:4347641

Length

3812 bp

Definition

Oryza sativa Japonica Group Os09g0527500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:21461359..21465170

Sequence Coding Region

21461634..21461856,21463694..21463770,21463841..21464003,21464130..21464191,21464285..21464363
,21464853..21464956

Expression

GEO Profiles:Os09g0527500

Genome Context

<gbrowseImage1> name=NC_008402:21461359..21465170 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:21461359..21465170 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgccgagagctactggcagtaccagtacgccgccgtcgacccgcgccagcaggcgccggcgccggtgcctgtgcccacgcccgcgctcatgtggcagcagcagcagcagcaggcggggtatcagcccgccgtggcgccggtcgcgcccccgatggctgctccgccactgcccgccggccccccgccgtcgttcaagcgccagcgcccggagtacttcgacatgccttctggacagggaaacagcctcttccacgaagcaatgagcccccattatgtccatcgcttgaacaatcagatgtcctatgctgctggtgctaaccaaagtgctattccacttggtgggatggccacatattcagcaggcatggacagtggaaaccatggcgctacaataactgaatcaagaactctctatgtggaaggactaccttcgaactgcacaaagagagaggttgcacatatctttcgccccttttctggtttccgtgaggtgagattggtcaacaaggagattaggcatgctggaagctgtaacctcttgtgttttgttgatttttcatctcctcctgaagctcgtgctgctctggagactctgcaaggctataagtttgatgaacatgaccatgagtcttccaacctgcgcatacaattctctctcactcctcgcaggaggccaattggtgggcctcgtgttagaaactaa</cdnaseq>

Protein Sequence

<aaseq>MAAESYWQYQYAAVDPRQQAPAPVPVPTPALMWQQQQQQAGYQP AVAPVAPPMAAPPLPAGPPPSFKRQRPEYFDMPSGQGNSLFHEAMSPHYVHRLNNQMS YAAGANQSAIPLGGMATYSAGMDSGNHGATITESRTLYVEGLPSNCTKREVAHIFRPF SGFREVRLVNKEIRHAGSCNLLCFVDFSSPPEARAALETLQGYKFDEHDHESSNLRIQ FSLTPRRRPIGGPRVRN</aaseq>

Gene Sequence

<dnaseqindica>276..498#2336..2412#2483..2645#2772..2833#2927..3005#3495..3598#ctcctcgcgctccacgcgcgcccgcgctcgccgccagcgcgcgctgccccggagcgcgacgacagctgtgtggggggcagcgacagcgccactggcgtcagcaccagtaaccgaagccgcgctcgctggctacaaaacacgcgccccctcctcccctcaccgcggctgcgcacgcattccccattccccattcccctatctctcgaaccctagcccctagtcccctcccgaaccctagcccccaccgcgccgccgccgccgccctcccgatcgcgatggccgccgagagctactggcagtaccagtacgccgccgtcgacccgcgccagcaggcgccggcgccggtgcctgtgcccacgcccgcgctcatgtggcagcagcagcagcagcaggcggggtatcagcccgccgtggcgccggtcgcgcccccgatggctgctccgccactgcccgccggccccccgccgtcgttcaagcgccagcgcccggagtacttcggttcgtgctcgcccacacattcctcctcttcttgattgttaattttgtgttgcctgctagattagtcgtaagaaagtataggtagctttgttgtgggtatccatggggtttagggctttaggctatagaacatatagatgatgatagtggaagctagtctttttttataagcagatcttgttgtcctgaacttttggggttcagggcgagaaaaaatcagaggccttttatttgaatgtatcatcatcagtaatcttaataaattgcaaatatccctcatgtttgaattacagatccagatattatcagttataagtctgaaactctgaataatagggagcagaatcacctggatttttgtgatcttgtagaaaccgaaatatcatcaagaactcgtggaagccaatctcctcaagggtataatctgttagaggactcctaaaaagggaaaacacacacacacaccaactatagaaaatcagtgcaaagctatgagataaaccaaccaaccactcaactcaaggagatcttgctgactaactagagaaactaattattatgaacaactcacaggaatgaggaattcataaccaatcaactctaatggcaatctttagaaccaaaagaaatcaaagttccatcttttttttgtcaatcttctttggggtgttattcaaccctgaagcaaaggagtgagatctaaaaaacttaaagagtacgacatatgcagtggctgaatgacgggattacatgcagcaaatgacacacttaattaggctttagtcatgctagctaacccagcgtagtttcgggaatagataagggtcgaggggaatgagatagcttcgatgcttcgtgacctgcgcagactgatatgcttgttggacatctgctaatgaggcttgggcttccaaacaatacgtgtgtggtctggggccctgactgccctgactcagggccggccttgtgttttccctgccacgctgtactattaacctgtccaaggaaatggtaggagaagttgcaggcttgtagttttgaattgttccaatggtagatgtttgtttgaaatgaatacataaaaatgaaaccattcctcatttcctgataaagcctcaatgtcgtaagatgggaactagtaattttcatatgtgaatctacaagatcatattgattctttgttttctttaaagttagatggtgtagcatggtttatatgatatgttagattgaattaatctctggttaggctaatatttcactatcattggtaggctctaggcaaaaggtttcggcttctattatagagtagtcggtctgactattttgatggctaaatggtttgtaaattctgaaatctaaaacaagagaaaaaaaaaggaatttgttgtgtaaaaaggttctaataatctctacaaaggaatttgctgcttgcatgccgttacgttgtttgccgccaattctgaatgcatctatcatcacaacaataaagtttagtccttttttagtatcattttattgggaaaatgattgcttgctatgcacagctacctgaaactatgtatcaggattgcctacctgcacatagatttggcggctttttagttgttagataatgttgtaattaccgcacatcattaattcttcacatgtttgcttctattgcaaccccatttttgtcatagcttgcttcttaaatggacagggaaaaaatattgacgagactgttcagtagtttcttcctaatgtattttctccaagtgagatgttcatttgtttcagtcaaaaaaaaaagatgtgcatttgtatattttaacactttacactttgtttgcagacatgccttctggacagggaaacagcctcttccacgaagcaatgagcccccattatgtccatcgcttgaacaatcaggtattatatcaattataagcttgttaatttgaggatagcaactttcttactaacatagtgctggttgcagatgtcctatgctgctggtgctaaccaaagtgctattccacttggtgggatggccacatattcagcaggcatggacagtggaaaccatggcgctacaataactgaatcaagaactctctatgtggaaggactaccttcgaactgcacaaagagagaggttgcacgtatccttttctatgcttgtaaactaaaatcacattttcctagctataattagtgtaggtatcttttgcgatgtaattcatattacacctcctaggtgcttttgcccttaactctttcttctgcagatatctttcgccccttttctggtttccgtgaggtgagattggtcaacaaggagattaggcatgtaagttaaatgctacctgtgaaccaaattttccctgttattttttgcaaagccaagcatgcttacatgtcaaatcccctctctgttttgcaggctggaagctgtaacctcttgtgttttgttgatttttcatctcctcctgaagctcgtgctgctctggagactctgcaaggtaattataacatcatattttctgcatccatatgcattgtagttatgttgccaatttcgttagatagtgcttgcgcgcagtttcattcttttatgtttgtgtgcctttagtcttattaaaaatctgtttatttttcttaatatttttccctttgtcccacatccagtaggttttagtgtgatgactgaactatgtagagtgtagtccatagataactaaactaagattattattatttttttgctgaaaactaagattgttatttcgaaatatcataatttttccttgttccactttgaaaccagcttactgtcattctatgtgtgctatatcatatgtaataatatttgtgtgcacatcaactttagtgctttccatcataaaactagacgtttcattggtagggagagaataaactttgagcttctaatacttgttcaggttataagcttgaatttggctctgaaactatgacgttttgctttgcaggctataagtttgatgaacatgaccatgagtcttccaacctgcgcatacaattctctctcactcctcgcaggaggccaattggtgggcctcgtgttagaaactaagtttcttgggtggagttgaattaataatgcagagcaaaatttgtggagaatctctagggagacttgtatacaatgctagaccaaacttgactctgatgcaccgttagtgttgtatgttgttgctttgcaaagattctgccgtgtaggttggtatggatgtgttgataactattggttggatggaaacaaagtagatggggctgaaaaattgttt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0527500, RefSeq:Os09g0527500