Difference between revisions of "Os09g0533300"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os09g0533300| Description = Phosphoesterase At2g46880 family protein| Version = NM_001070303.1 GI:115480348 GeneID:4347682| Length = 3354 bp| D...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os09g0533300|
 
GeneName = Os09g0533300|

Revision as of 21:02, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0533300

Description

Phosphoesterase At2g46880 family protein

Version

NM_001070303.1 GI:115480348 GeneID:4347682

Length

3354 bp

Definition

Oryza sativa Japonica Group Os09g0533300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:21774136..21777489

Sequence Coding Region

21774179..21774494,21775934..21776325,21776414..21776864,21777249..21777286

Expression

GEO Profiles:Os09g0533300

Genome Context

<gbrowseImage1> name=NC_008402:21774136..21777489 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:21774136..21777489 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcctcgcccaccggcgcctcctcctcctcctcctccacctgctgctgctcgtcgccgcggcggcggaggcggccgccgccggagcagggaggaaggagaagggtatcggcggcggtggggggctgcggttccggggcgggagcgggacgttcaaggtggtgcaggtggcggacatgcactacgcggacgggcggcggacggggtgcctcgacgtgctcccctccgaggccgccggctgctccgacctcaacaccaccgccttcctctaccgcctcttccgcgacgaggaccccgacctcgtcgtcttcaccggtgataatatctatggctttgatgcaaccgatgcggccaagtctatggatgcagcaatcgccccagccattaacatgaaccttccttgggctgcggtgatcggaaaccatgaccaagaaggtacgctgtcacgcgagggtgtgatgcgtcaccttgtgggcatgaagaacaccctttctcgcttcaacccagaaggaatagaaattgatggttacggaaattacaatttggaagttggtggggttgaaggaacattgctggctaacaaatcagtgctcaacctctattttcttgacagtggtgactattctacggtgccttccatcggtggatatggttggatcaaagcttcacagcaattctggttccagcaaacctcttcgaatctccagacaaaatacatgaaggaggaaccgaagcagaaggcggcagcgcctggtcttgtgtacttccacatcccattgccagagttcagcagcttcacatcatccaatttcacaggagtgaagcaggagggtatcagctcgccatcgatcaactctgggttcttcgccagcatggtggaggctggggatgtgaaggccgccttcatagggcatgatcatgtgaacgacttctgtggaaagctcaatggcattcagctgtgctatgctggtggatttgggtaccatgcgtatgggaaggccgggtggtcgaggagagcgagggtggtgtccgtgcagcttgagaagtcggacggcggcgagtggcgaggtgtgaagtccatcaagacatggaagaggcttgatgatccacatctcaccacaattgactcagaagtcctctggaacagaggctccaatggaaggcgcaagaagaatcctgatggaaagatgagatag</cdnaseq>

Protein Sequence

<aaseq>MGLAHRRLLLLLLHLLLLVAAAAEAAAAGAGRKEKGIGGGGGLR FRGGSGTFKVVQVADMHYADGRRTGCLDVLPSEAAGCSDLNTTAFLYRLFRDEDPDLV VFTGDNIYGFDATDAAKSMDAAIAPAINMNLPWAAVIGNHDQEGTLSREGVMRHLVGM KNTLSRFNPEGIEIDGYGNYNLEVGGVEGTLLANKSVLNLYFLDSGDYSTVPSIGGYG WIKASQQFWFQQTSSNLQTKYMKEEPKQKAAAPGLVYFHIPLPEFSSFTSSNFTGVKQ EGISSPSINSGFFASMVEAGDVKAAFIGHDHVNDFCGKLNGIQLCYAGGFGYHAYGKA GWSRRARVVSVQLEKSDGGEWRGVKSIKTWKRLDDPHLTTIDSEVLWNRGSNGRRKKN PDGKMR</aaseq>

Gene Sequence

<dnaseqindica>44..359#1799..2190#2279..2729#3114..3151#cggaattcctcccgagtccagtccactccgcgaccgcgccaacatgggcctcgcccaccggcgcctcctcctcctcctcctccacctgctgctgctcgtcgccgcggcggcggaggcggccgccgccggagcagggaggaaggagaagggtatcggcggcggtggggggctgcggttccggggcgggagcgggacgttcaaggtggtgcaggtggcggacatgcactacgcggacgggcggcggacggggtgcctcgacgtgctcccctccgaggccgccggctgctccgacctcaacaccaccgccttcctctaccgcctcttccgcgacgaggaccccgacctcgtcgtcttcaccggttggattcctctgccccgcccacccaatctcctcctcctccacccattccttgttagtgcttcgattaattaattaattattcaactatgagtagtttattctgatcaattttcgtatatcccacctaacttctttgtcgccttttcctacgaatcttggttaacaaatccatttctgataccgattactcagcagtttgtttgccactctagcaaagtaacccgcgtgacccaacgatcttacgagttttttttttttgcagcagtaattttaggtacgtaatattgcatgtaacataggtttaatgattctcgaacagtaaatgattggtgaaccggcgaatccgtttgcaacttctctgaaaatattacccgagtagtactttttctctgaaaatattctcgtaatggtttattgacagtacaataaattcgtattatatgtgctagtgaggtcattagcgagctgaatttgctgtacactggttcatacctcctctgacatttttgcagaggaagtgtagtttctgtgaacttgatacgtactcgtactagtagtactaaagtacaacaagaatgtcacgggtttccctttccgaagtgataaagatgtgtgggccgggccactgaagctcattcttggattggatttcaagaattctcatctgtagggtgggggttgccattcccaatcatgcagtgaggtctaggtctagattgttgattggtccattagatcactaccacgatgggatgaactggtctcgtgatggctacatccatgatacacttggacaattactgcacacctccatctgatcgagctagcagccgtactccctccatcctaaaaaaaactcaattcctgagttttcgcgtctaacatttgaccgttcgtcttatttgaaaaaaatatgaaaaaatttaaaaagataaatcatgcataaagtattgttcatgttttatcatctaacaataatgaaaatagtaatcataaaaaaaatttatataagacggacgatcaaacgttagacacgaaaatcgaagaattcggtctttttgggacagagggagtagagaagaacaacagtacaaatgttgcagcccttgtgatctgatcagctcttgatcactgtcctgttttcgtcgctttgtttcacgggtaaccttggttgatgttccaaagctgctacttttgcagcgtttggatgcagccactgctagctgttttttttttgtctgtttttccctttttgggtgcagacaatacatcaatttagtagcatttacataattacgtttttttcatataaaaatggcttgttcagttactcgtattcagaacgatgatggccatagttcatatacttcactgattattgttactttatttccctgttttaaagactatgtattgtttggtgatgctatttggcaggtgataatatctatggctttgatgcaaccgatgcggccaagtctatggatgcagcaatcgccccagccattaacatgaaccttccttgggctgcggtgatcggaaaccatgaccaagaaggtacgctgtcacgcgagggtgtgatgcgtcaccttgtgggcatgaagaacaccctttctcgcttcaacccagaaggaatagaaattgatggttacggaaattacaatttggaagttggtggggttgaaggaacattgctggctaacaaatcagtgctcaacctctattttcttgacagtggtgactattctacggtgccttccatcggtggatatggttggatcaaagcttcacagcaattctggttccagcaaacctcttcgaatctccaggtgaactttaagttgcacattgtacacacacaaaaaaagaatcaccaggtggaataagttgacataatgacaatgttgtgaaatgcagacaaaatacatgaaggaggaaccgaagcagaaggcggcagcgcctggtcttgtgtacttccacatcccattgccagagttcagcagcttcacatcatccaatttcacaggagtgaagcaggagggtatcagctcgccatcgatcaactctgggttcttcgccagcatggtggaggctggggatgtgaaggccgccttcatagggcatgatcatgtgaacgacttctgtggaaagctcaatggcattcagctgtgctatgctggtggatttgggtaccatgcgtatgggaaggccgggtggtcgaggagagcgagggtggtgtccgtgcagcttgagaagtcggacggcggcgagtggcgaggtgtgaagtccatcaagacatggaagaggcttgatgatccacatctcaccacaattgactcagaagtcctctggaacagaggctccaatggtatgacattctcctgtagagtctgcatgactgtgaatccatgatggtttttccaagctagataattatatctgattaaaaatgagtaaattttggtggatgtggtctttcatagtagtgtaccatcattgtttgttaaactactttttgaacaggactacaacagtttttagacttcaatggtatggcattcttctacatgactataaatctatgatgcttattcaagcttatgattatatctgattaaaaaatgagtaatcatagtgaattgtaatatttcatagtagtgtaccatcaatttttattgacctacttttcgttttcggcactactacaattaatcttaaagagttaccaattgacattttgaatatttggcaggaaggcgcaagaagaatcctgatggaaagatgagatagtgatatagatgggaagacggggatagtgaaatgttgcaacgtactacacgttatgatgtgctgtttgccaatttgttttacaaaattttcgatttatgtaaatgaacaaaaacatggtacacgacacggcatgcacccttttcgcggttgtaattctcaccgagaaaacagtgaattttagtaaaaacagttactgtagtttt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0533300, RefSeq:Os09g0533300