Difference between revisions of "Os09g0533400"
(Created page with "{{JaponicaGene|
GeneName = Os09g0533400|
Description = Peptidase S16, ATP-dependent protease La family protein|
Version = NM_001070304.1 GI:115480350 GeneID:4347683|
Lengt...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os09g0533400| | GeneName = Os09g0533400| | ||
Revision as of 21:03, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os09g0533400 |
|---|---|
| Description |
Peptidase S16, ATP-dependent protease La family protein |
| Version |
NM_001070304.1 GI:115480350 GeneID:4347683 |
| Length |
6613 bp |
| Definition |
Oryza sativa Japonica Group Os09g0533400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 9:21777907..21784519 |
| Sequence Coding Region |
21778047..21778130,21778400..21778501,21778618..21778863,21779077..21779271,21779378..21779671 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008402:21777907..21784519 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008402:21777907..21784519 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcggacgcggcggtggagctgcctggacggctcgcgatactgccgttccgcaacaaggtgctcctcccgggggccatcgtgcggatccgctgcaccaaccccagcagtgtgaagcttgtggagcaggaactctggcaacgggaggagaagggtctgatcggggtgctccctgtgcatgactccgaagctgctggctcattgctgtctcctggtgtaggcagcgattcaggtgagggtgggagcaaggcgcctggtggttctgcaggagaatcaacgaagcaggatactaagaatgggaaggagaccattcactggcacagccggggagtagctgctagggctttgcacctttccagaggtgtggagaaaccaagtggaagggttacatatattgtcgtccttgaaggtttatgtaggttcagtgttcaagagctcagtgcaagaggttcatatcatgtcgctcgtgtctcacgtcttgatatgacaaaaacggagttggagcacgcagagcaggacccagatctcattgctctttctaggcagttcaaagctactgcaatggaactaatttccgttcttgaacagaagcagaagacagttggtaggactaaggtgcttcttgagacagttcctgtgtacagactagctgatatttttgtggctagctttgaaataggttttgaggagcagttgtcaatgctggattcagttgacttaaaagttagactttccaaggcaaccgaacttgttgacaggcacctgcagtcaattcttgtagctgagaaaataactcaaaaggttgagggtcagctatcaaagtctcagaaagagtttttgcttcgccagcagatgcgggctatcaaagaggaacttggcgataatgatgatgatgaggatgatgtagcggcattggaaaggaagatgcagaatgctggaatgcctgctaatatttggaagcatgctcaaagggagttaaggcgtctaagaaagatgcaacctcagcaacctggatatagcagctctcgaacctacttggaacttcttgctgaacttccttggcaaaaagtcagtgaggagagggagcttgaccttagagctgcaaaggagagtcttgaccgtgatcattatgggctgaccaaggttaagcaacggattattgaatatttggctgttcgtaagcttaagcctgatgccagaggtccagtcctgtgttttgtgggaccacctggtgttggaaagacatcattagcatcgtcgatagcaaaggcactaaataggaagttcataagaatctctcttggtggtgtaaaggatgaggctgatattaggggtcaccgaagaacatacattggaagcatgccaggacgtctcattgatggactaaagagagtatcggtcagcaacccagtgatgcttcttgatgaaattgacaaaactggttctgatgtacgtggggacccagcatcagcgctgctagaagttcttgaccctgagcagaataaaacgttcaacgatcactatttgaatgttccatttgacctgtcgaaggtcatatttgttgcaactgccaacaggatgcaacccatcccccctcctctgttagataggatggaagttattgagctaccaggttacacacctgaagagaagctaaaaatagccatgaaacatctcataccaagggtactggaacagcatggcttgagctccacatatcttcagattcctgaggctatggtcagactcatcattgagagatacacgcgagaagctggtgtacgtaatcttgagcggaacctagctgcattggcccgtgcagctgcagtcaaggttgcggagcaagatagtgcgcttagacttggcaaggaaatacaaccaattactacaactctactggattctaggcttgctgatggtggtgaagttgaaatggaagttattcctatgggccaggacatatcaaatacttatgagaatccatcacccatgattgttgatgaggctatgctagaaaaagtgcttgggcctccaagatttgatgatagcgaagctgcagatcgtgtggcgagcccaggagtgtcagttgggcttgtttggacttcatttggtggggaggtacaatttgtcgaggctacagcgatggtgggtaagggtgatttgcatctgacagggcaacttggtgacgtaattaaggagtcagcacagttagctctgacatgggtgagagcaagagctgctgaccttaatctgtcacctacttctgatattaacttattggagagtcgtgatattcacatacattttcctgctggcgcggtgccaaaggatggtccttctgctggagtgacattggtaacatcattagtgtcactatttagccaccgaaaagtcagagctgacactgctatgacgggagagatgactcttaggggccttgtgttgccagttggcggtgttaaggataaggtacttgcagcacatagatatggcatcaagagagtaatattgccagaaagaaacatgaaggacttggctgaggttccagcacccattctctctggcttggagattctgcttgtgaagcgcatcgaggaagtacttgaccatgcttttgaaggtggatgccctctgagaccacactccaagctatag</cdnaseq> |
| Protein Sequence |
<aaseq>MADAAVELPGRLAILPFRNKVLLPGAIVRIRCTNPSSVKLVEQE LWQREEKGLIGVLPVHDSEAAGSLLSPGVGSDSGEGGSKAPGGSAGESTKQDTKNGKE TIHWHSRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSARGSYHVARVSRL DMTKTELEHAEQDPDLIALSRQFKATAMELISVLEQKQKTVGRTKVLLETVPVYRLAD IFVASFEIGFEEQLSMLDSVDLKVRLSKATELVDRHLQSILVAEKITQKVEGQLSKSQ KEFLLRQQMRAIKEELGDNDDDEDDVAALERKMQNAGMPANIWKHAQRELRRLRKMQP QQPGYSSSRTYLELLAELPWQKVSEERELDLRAAKESLDRDHYGLTKVKQRIIEYLAV RKLKPDARGPVLCFVGPPGVGKTSLASSIAKALNRKFIRISLGGVKDEADIRGHRRTY IGSMPGRLIDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHY LNVPFDLSKVIFVATANRMQPIPPPLLDRMEVIELPGYTPEEKLKIAMKHLIPRVLEQ HGLSSTYLQIPEAMVRLIIERYTREAGVRNLERNLAALARAAAVKVAEQDSALRLGKE IQPITTTLLDSRLADGGEVEMEVIPMGQDISNTYENPSPMIVDEAMLEKVLGPPRFDD SEAADRVASPGVSVGLVWTSFGGEVQFVEATAMVGKGDLHLTGQLGDVIKESAQLALT WVRARAADLNLSPTSDINLLESRDIHIHFPAGAVPKDGPSAGVTLVTSLVSLFSHRKV RADTAMTGEMTLRGLVLPVGGVKDKVLAAHRYGIKRVILPERNMKDLAEVPAPILSGL EILLVKRIEEVLDHAFEGGCPLRPHSKL</aaseq> |
| Gene Sequence |
<dnaseqindica>6390..6473#6019..6120#5657..5902#5249..5443#4849..5142#4320..4533#3892..4022#3483..3689#3203..3404#2991..3118#2643..2726#2351..2530#2113..2204#1696..1865#1148..1259#931..1034#114..223#ttcgtcgtcttcgtcatcgtctccaacctccgatttcaattccagcgcgggagccgtaatcccctccacttccgtacgattccagcgcggtggggtgggcgaggtgcgtggccatggcggacgcggcggtggagctgcctggacggctcgcgatactgccgttccgcaacaaggtgctcctcccgggggccatcgtgcggatccgctgcaccaaccccagcaggtaagtagtgggggcggcgtcgtcgtcggcgcccctcgagcggattccgcgcaccgcgagattggggggtttcacggtctcgggttgtgtgggttttctagggtggaattttgggtggtggccgatgggctgattgggcgcgcgggggtttgggtggtggatggattattagtccaagttaggtttaatcagcgtgtggttggtaaaatcgcagtagcttagctttgtttgatgctattgtattggcttagtcagcttagctcatgattcgtgaggcctttttcttcgatttcgtctgtggttttgtgaatttgtgtggagcaagtagaaattgctttttcttctttttctttttctgcttttttgtattgtagtcgtcacttgttgttttctcgatgggatgatctcgtctgtgatgtgaacagttaaaaagtttccagcgcagtttgatgaactcgctgaatccaaagtggtttagagcggctttggttgctttatggttgactaattcagctcctaattatatctgtttggtgttcaaaccttctaggcgtgttgtacttacttgtggttcagattagtattgagatttttcctctgtgtatgcgtacgatggctttgctagtgtgtgttgacttggtgggaagggaaaattctgccttttggtttggattttgacttcatcaatgtacttgtttctcctgcagtgtgaagcttgtggagcaggaactctggcaacgggaggagaagggtctgatcggggtgctccctgtgcatgactccgaagctgctggctcattgctgtctcctggtgagataaaggctgctgctgctgctgttttttttttaatttggttctgtgagccatttgtgggcattgttgtatggtggtttcttactgttattgctgttgctcgcatataggtgtaggcagcgattcaggtgagggtgggagcaaggcgcctggtggttctgcaggagaatcaacgaagcaggatactaagaatgggaaggagaccattcactggcacagccggtgtgtaacattgccatctttgctaatatgtgtttttccatatggtcatatctctgaacaagatttaaagaagaaattcctttgaatatgtcgggaatagtgggaaaacaatagcatacgattactaaaggtaaacaaactagtgttagtgtgggcacatgctcttattacattctatgaacacttgataagttgatagaagcaaataattttctttctgttgggcgcactatgcgttggtgtgacattgcattaacttgcagtgggcttagataaagcaagagggttaagattggttgatagtggtcaactcttctttgacacaattatttgattgagaactgttggaaattagtcaattttgttgtgttttcctacctgtctccctttctccaaaaaaaggtgtgtaacactttttcattccgtccatctataggggagtagctgctagggctttgcacctttccagaggtgtggagaaaccaagtggaagggttacatatattgtcgtccttgaaggtttatgtaggttcagtgttcaagagctcagtgcaagaggttcatatcatgtcgctcgtgtctcacgtcttgatatgacaaaaacgggtaagatcttgtttgttaaaaatattagtttatttttgttgctattttcctgcactacattgtcataagtctgttgtagctgttattttgtacagctccacccttttcttccactttccattgtagttatgccgatagtttggtggtatattagtttattcttgtaccttctttgttaagtgccttttgaattcacctaatatcaaattctaacacttacattattaatgtttgtgcaatttgctagagttggagcacgcagagcaggacccagatctcattgctctttctaggcagttcaaagctactgcaatggaactaatttccgttcttgaacaggtgaagaaatttaacagagcgctataccctaaatagatattcccaatgtgactatcagatctgcagtctcatctttctgttatccatgacatttttctttcaaggttatgtatgacttacggcaatgatgttgtttctaattgcagaagcagaagacagttggtaggactaaggtgcttcttgagacagttcctgtgtacagactagctgatatttttgtggctagctttgaaataggttttgaggagcagttgtcaatgctggattcagttgacttaaaagttagactttccaaggcaaccgaacttgttgacaggcacctgcaggtgaagacatttatgattagtgaattagttttccttaattttaataacttcatcatcaaaggtttaaacattgggtagtttttaacttatttcctttccttgtgatgaacagtcaattcttgtagctgagaaaataactcaaaaggttgagggtcagctatcaaagtctcagaaagagtttttgcttcgccagcaggtttgtttgcccatcatgttattttctgttcttgaagattcaggattttcgggctgctgatgtttttgctctcaacaattatgtcagtataagttacatttcatcatacttacatgttttttgaaagtttgaaagtatacatgatgagcacaaccctttttttacgattcacatcttgttggagtttatttgctttgtttccattgcttcttttgtgccacattgttttgtttccaatatgatatcaacccttttaatgcacagatgcgggctatcaaagaggaacttggcgataatgatgatgatgaggatgatgtagcggcattggaaaggaagatgcagaatgctggaatgcctgctaatatttggaagcatgctcaaagggagttaaggtaacttatcatctcattctcaatgtacaattgtacaggcatgtggtaccgccggttcctatatctagttgttttttcttgcaggcgtctaagaaagatgcaacctcagcaacctggatatagcagctctcgaacctacttggaacttcttgctgaacttccttggcaaaaagtcagtgaggagagggagcttgaccttagagctgcaaaggagagtcttgaccgtgatcattatgggctgaccaaggttaagcaacggattattgaatatttggctgttcgtaaggttggtacacatgcataaatttatgtgcttatgatatcatgtattttctctctcatgggtgcacgttaatactggcagcttaagcctgatgccagaggtccagtcctgtgttttgtgggaccacctggtgttggaaagacatcattagcatcgtcgatagcaaaggcactaaataggaagttcataagaatctctcttggtggtgtaaaggatgaggctgatattaggggtcaccgaagaacatacattggaagcatgccaggacgtctcattgatggactaaaggtttaatcacttgtttttcttatttcaggagtaacttatgaccttacaatttctttgaccagaccaatcttgttttacttttgcttattaatgtcgtatttccacctgacaaaccattttgtgtttctaatatacttaagtcttggattaatagtgaaatctcttgtgctatattcatattctgcccattaaaaaaatgcagagagtatcggtcagcaacccagtgatgcttcttgatgaaattgacaaaactggttctgatgtacgtggggacccagcatcagcgctgctagaagttcttgaccctgagcagaataaaacgttcaacgatcagtatcctttcaaattattcagataatgaacagcattttctgattaattggttactttcttaatggagttgggggggatcactacctgtggacatctttctattgtgtttttcatgtaccgctcaattttcatatttagttggatagttacagtttatttcccccattatctgcaatgctatgttctgggttgcctataacttgcgtacactacacaatgcttagagaagagatttctttacttgatatatgatctatattatcatacatttagaattccttaacatgttttcaccagctatttgaatgttccatttgacctgtcgaaggtcatatttgttgcaactgccaacaggatgcaacccatcccccctcctctgttagataggatggaagttattgagctaccaggttacacacctgaagagaagctaaaaatagccatgaaacatctcataccaagggtactggaacagcatggcttgagctccacatatcttcagattcctgaggtaagatatgcagttttctgctgcatcctttgttgcctataaagaaattcggcatattgtttgattaaaaatagtttagtttgatctagaatcaatgcaagattagtgaatgtggagagctggagatgcatactatttaccatgcttttgcacctttgatgaaacagtaggcactgcctgattgtgctctgctaaataatagagttgatctcatcattccgatattttgctaacagcagtactttgatgaactgctacatttttgggttaagttcttgactcctgagtatttcgtcatgcttgccatttctccaggctatggtcagactcatcattgagagatacacgcgagaagctggtgtacgtaatcttgagcggaacctagctgcattggcccgtgcagctgcagtcaaggttgcggagcaagatagtgcgcttagacttggcaaggaaatacaaccaattactacaactctactggattctaggcttgctgatggtggtgaagttgaaatggaagttattcctatgggccaggacatatcaaatacttatgagaatccatcacccatgattgttgatgaggctatgctagaaaaagtgcttggggtatgctattaaacatttgagtattgagtatagccttatgagaagctacagagttctttctttttgtttgtcttacttatggtaatatgctatatttgtgctacagcctccaagatttgatgatagcgaagctgcagatcgtgtggcgagcccaggagtgtcagttgggcttgtttggacttcatttggtggggaggtacaatttgtcgaggctacagcgatggtgggtaagggtgatttgcatctgacagggcaacttggtgacgtaattaaggagtcagcacagttagctctgacatgggtaagcatcttctttaactttcacctatctatgcattggttgcatcatgctgctttgtttattttctgctggttctctgatatcgccctttgaagttatttttctccaattattgttactggaatgaaactccaatattacataagaagaaaacacaatgttttggtgcctagttttgcatagtggtactcatcatttccttggttttgacaggtgagagcaagagctgctgaccttaatctgtcacctacttctgatattaacttattggagagtcgtgatattcacatacattttcctgctggcgcggtgccaaaggatggtccttctgctggagtgacattggtaacatcattagtgtcactatttagccaccgaaaagtcagagctgacactgctatgacgggagagatgactcttaggggccttgtgttgccagttggcggtgttaaggataaggtactgccctataggttcctgacatgttatttaattgacttcagaaggatgaaagcttaaccattttctctgctctgctctttgactaacttgaaatgtttttttctggaattcaggtacttgcagcacatagatatggcatcaagagagtaatattgccagaaagaaacatgaaggacttggctgaggttccagcacccattctctctggcttggaggtatgtattgagagctttgctctatgtatttcgacagtcagagatgctctaaggccctgagcatatagttgatatgtatggtgcacaaattgtttcggagttaaaaaatatatcatagataaagtagcattggaagaaatttccgataccatatagtagacgtatgttttgaatcgtagatgaccagtaaatagagttttcccttttgggtgcaatgtagctgtctaaaaaatgtctattgctgactttacttcgacctgctactgtagattctgcttgtgaagcgcatcgaggaagtacttgaccatgcttttgaaggtggatgccctctgagaccacactccaagctatagcatcaaccaatctgaagatggcgtttgatctggtatactttcctgctggttatgtacctattttggagattcatccataaaacaaggttcagatttccatgaaagagcaactattccacgaggtagaatctcacgccaaa</dnaseqindica> 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| External Link(s) |
