Difference between revisions of "Os09g0538000"

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(Created page with "{{JaponicaGene| GeneName = Os09g0538000| Description = Ribonuclease T2 family protein| Version = NM_001070329.2 GI:297609864 GeneID:4347709| Length = 2407 bp| Definition ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os09g0538000|
 
GeneName = Os09g0538000|

Revision as of 21:03, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0538000

Description

Ribonuclease T2 family protein

Version

NM_001070329.2 GI:297609864 GeneID:4347709

Length

2407 bp

Definition

Oryza sativa Japonica Group Os09g0538000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:21996883..21999289

Sequence Coding Region

21997186..21997499,21997651..21997840,21998184..21998259,21998284..21998345,21999108..21999221

Expression

GEO Profiles:Os09g0538000

Genome Context

<gbrowseImage1> name=NC_008402:21996883..21999289 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:21996883..21999289 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcttccggcaggatagctctgctctgccttcttggcttgctgctggtagcagcctcaccggctgccattgctgccaaagatgacaaaatcttctaccagattactttcatgtggccgggagcgtactgcgcgcagacgaaggccggatgctgcatgccgaagaccgacgtcgccggcttcacggtctacaacgccaccaccaactcttccctgtccagctgcagcaacactccattcgacatgaaccaaattggggatgtcacgaggctgatgcagtactggaacaacatcaggtgccccagcaagagcggccagaagggctggaagaacgcgtgggagacgtccggcgtctgctccgacctcaccgagagcgcctactttgacaccgccctcgccctccgcgacaagatcaaccccctttctcgcctcgtcagcaacggtattaagccggactttgggctgtacagcgtgaagaagatcaaggaggtgatcgaggaggggatcggcgcgccggcgctgatccagtgcagcaagggcccgttcaacaagttccagctataccagatatacgtctgcgtcgcggaggacgccaagacgttcgtggagtgccccagcccgaggaagccgtacacctgcggcgacgacatcctcttccaccctttcaagaagtggatgctcaagaccaactccaccaaatcctacgccgccgccgacgccatcgaccagctgctcgaagcggtcatggaaatctga</cdnaseq>

Protein Sequence

<aaseq>MASGRIALLCLLGLLLVAASPAAIAAKDDKIFYQITFMWPGAYC AQTKAGCCMPKTDVAGFTVYNATTNSSLSSCSNTPFDMNQIGDVTRLMQYWNNIRCPS KSGQKGWKNAWETSGVCSDLTESAYFDTALALRDKINPLSRLVSNGIKPDFGLYSVKK IKEVIEEGIGAPALIQCSKGPFNKFQLYQIYVCVAEDAKTFVECPSPRKPYTCGDDIL FHPFKKWMLKTNSTKSYAAADAIDQLLEAVMEI</aaseq>

Gene Sequence

<dnaseqindica>1791..2104#1450..1639#1031..1106#945..1006#69..182#atcgcagcggcgatttctcatctgaattgcaggccaattccagttgagtttctccacagaccacagatatggcttccggcaggatagctctgctctgccttcttggcttgctgctggtagcagcctcaccggctgccattgctgccaaagatgacaaaatcttctaccagattactttcatggtatggatgcacagattaattaagccctgtagctatttgtagatgatcgatttaaatacgtgcaaactctgaactcacctgttatatttgagttttattttcgtttctattttatagagagactaacatttgcaggcaggattgttaattgattcatgaccccccagctcagttttcagtcgcatgggtaaagctgttaattaattaaattaactgaccgttctctaaatatgcaaagggagaaatataaccgtcgagatttatcatcaccagcatgtatcagatttttaatagcagaagaggaaataacacatctgattcgcgtaaaaaaaaacacatctgatgatctacacctattgcatttttaaatctgaattctgaaacgtggcgaacaaagctcgaggacgacagatgtggacactgcaaataaactaaggattttattttgaaaaaaaagaggaaaaacgcacgttttgcttaacatggaccaccggttttaatttgtcgagacacgaactgatcatccatgcaaaatttgtgataacccatactgaccttgtcgacggcgtgcagctaaccatatggccacccatcacctcatgaaagctaccacctaataattcgtccgtatttgctgaaacttgattgttcttgcagcatcttttattgttcttgcttgttcatggtagtagcaattaaaacactcactagatctggcaacaataataacgtgattaattaaggatatggatgcacatgtagtggccgggagcgtactgcgcgcagacgaaggccggatgctgcatgccgaagaccgacgtcgcgccggcgtccgacttctacgtcgccggcttcacggtctacaacgccaccaccaactcttccctgtccagctgcagcaacactccattcgacatgaaccaagtatgtgtatatatacatcaatacatacaaacttgactagatctactctttggttgattctatttatttagaactattctacggtccttgaggtaccaaaaatttagtgtaaaatttgatacctcatagtacctggtactccatccgtttcacaatgtaagtcattctagcattttccatattcatattgatgttaatgaaattctattcattaacattaatatgaatatgagaaatgctagaatgacttatattgtaaaacgaagaaagtaccttatagtactcttctcaaggactgtaaaattgctcatttatttatcatgggatgtgatgtgtactgcagattggggatgtcacgaggctgatgcagtactggaacaacatcaggtgccccagcaagagcggccagaagggctggaagaacgcgtgggagacgtccggcgtctgctccgacctcaccgagagcgcctactttgacaccgccctcgccctccgcgacaagatcaaccccctttctcgcctcgtcagcaacggtacactaaaaaataaaaaaacacgcacgcacaccaccacacacgtacaaacgtaacatactatagtactactacgctgataacaaaaacgacacgattacacgatttgagcttcatgcaccgaccagtttgttatactgcgcgtatgcaggtattaagccggactttgggctgtacagcgtgaagaagatcaaggaggtgatcgaggaggggatcggcgcgccggcgctgatccagtgcagcaagggcccgttcaacaagttccagctataccagatatacgtctgcgtcgcggaggacgccaagacgttcgtggagtgccccagcccgaggaagccgtacacctgcggcgacgacatcctcttccaccctttcaagaagtggatgctcaagaccaactccaccaaatcctacgccgccgccgacgccatcgaccagctgctcgaagcggtcatggaaatctgagctcgatcgatcgatcgatcaagaagacaaattaacccttgttgtgatatgcgatttgtgcgtgtgtgttgtctgtttcgatcgtgatgttttctgcgtgtttatttcgtgatgttctctcatcgcgcccgcgcgcggttgggtacgatccgggacacctacgtagcactgaatccgtctctgtgatgcattcagagaataagtccgaatatgtgcggccttgttaatgttttcatgaataactcgtgtagtgggattactttgtcatcggacatttcatgatttccgatgcacaccttggct</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0538000, RefSeq:Os09g0538000