Difference between revisions of "Os09g0537600"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os09g0537600| Description = Similar to Cyclophilin-like protein (Single domain cyclophilin type peptidyl- prolyl cis-trans isomerase)| Version = ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os09g0537600|
 
GeneName = Os09g0537600|

Revision as of 21:03, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0537600

Description

Similar to Cyclophilin-like protein (Single domain cyclophilin type peptidyl- prolyl cis-trans isomerase)

Version

NM_001070327.1 GI:115480396 GeneID:4347707

Length

2507 bp

Definition

Oryza sativa Japonica Group Os09g0537600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:21983423..21985929

Sequence Coding Region

21983570..21983647,21984293..21984368,21984509..21984556,21984793..21984816,21984910..21985092
,21985270..21985345,21985420..21985582

Expression

GEO Profiles:Os09g0537600

Genome Context

<gbrowseImage1> name=NC_008402:21983423..21985929 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:21983423..21985929 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctgcggaaggtggccgtcgccttcctcgcttgcgccgccctctacctcgccttcgccgcctactcccgccgcgagagccttggagaggttcgattacctgcagttactaacagggtatacttggatgtggaaattgatgggcaacatataggtagaattgtcattggcctttatggagatgttgtgccaaaaacagttgcaaattttagggctctttgtacaggagaagagggcattgggcacaagggtaaatctcttcactataaaggatcaagatttcatcgtattatcccaggcttcatgattcagggtggggacatagttagaggtgatggaaaaggaagtgagtctatatatgggggcaccttcccagatgagaatttcatagtaaaacatacacatccaggtgttattgccatggcaaattctggacctgattccaatggatcgcagttttacattaccacaatcaagacaagctggttggatggggagcatgttgtgtttggcagggtgattcagggaatggattatgtgtacgccattgaagggggtgctggaacttacaatggcaagcctaggaagaaagttgtaatcaccgactctggtgagataccgaaggagaaatgggctgaagaagtgtag</cdnaseq>

Protein Sequence

<aaseq>MLRKVAVAFLACAALYLAFAAYSRRESLGEVRLPAVTNRVYLDV EIDGQHIGRIVIGLYGDVVPKTVANFRALCTGEEGIGHKGKSLHYKGSRFHRIIPGFM IQGGDIVRGDGKGSESIYGGTFPDENFIVKHTHPGVIAMANSGPDSNGSQFYITTIKT SWLDGEHVVFGRVIQGMDYVYAIEGGAGTYNGKPRKKVVITDSGEIPKEKWAEEV</aaseq>

Gene Sequence

<dnaseqindica>148..225#871..946#1087..1134#1371..1394#1488..1670#1848..1923#1998..2160#gtctgcttcgtcgccgatctcgtctccgccgcccgcgagcgaatcgcccccaaatcgggagggcggctgctctcgcctgcagatttgcgccgtcgttgcggcgaattgatgaggtagaagtgtccaactactcgcccctggttcgcgatgctgcggaaggtggccgtcgccttcctcgcttgcgccgccctctacctcgccttcgccgcctactcccgccgcgaggtatgatgggctttctcttacagttggggacggatttgttcgattcggttgatcagtgacctaccgcgcggcaattcttggcttcgtaggtagtggcaacggagtggaattagactggatctttctgttccactgttgatttgttctacatgatgcagttgggttttagctgctcgcacctacagttctgcaatgtgatgtctgcaattagtatgctcgtgttgcgctgctcgagatgcttcagtagctagacgatattgtttactagtaggattgtagagaacaccatccccataaatcgtttagggggagacttttttctcaccgggccagaagggaaagacttaaagcaaggaatacatatatatgcgagttgctggcatctgactgcacaatgatttctgttttgctgacaacagtagccttattgtacaatgagttgaacctcatgactatggccatcactccttgtctcaagattagaacatggtgtttagattctgaaaaatatatagacgtggggcgctcgtttcattttgtggacgatctgggagataggttctggcctcggttatggtggtagtgactagtgagacgatgattcaatgttacagaatatttattcttctttctcaccttgtacagagccttggagaggttcgattacctgcagttactaacagggtatacttggatgtggaaattgatgggcaacatataggtatatcactatatcatcatgacaatctgtcttggatgttccaatggaaagaataaaacttgttgcttgcaccgttactatacatgtcactcagcttaagccctggttaacctaattcttgtgtgctcccctcattacaggtagaattgtcattggcctttatggagatgttgtgccaaaaacagttggtaatcttacgcccattcttttcttcatcatatttatttacaaacttgagattaatcctttggagacagtggcatagcagattgtggaattcttatgttttgtttgtgtggacaataaatctccccttgaagatactttgattatcatttgtagcatatagtttgtcccatttgtttgctactgtaatataaattggcaataatagcttgttgattttttatttctcattttgcagcaaattttagggctctttgtacaggtatttcttcttcctagatctattcctgttacagctgaaattcaaccttctgttcacatgattatccatattgcactctgttcactattgcaggagaagagggcattgggcacaagggtaaatctcttcactataaaggatcaagatttcatcgtattatcccaggcttcatgattcagggtggggacatagttagaggtgatggaaaaggaagtgagtctatatatgggggcaccttcccagatgagaatttcatagtaaaacatacacatccaggtcagaaattcagaatgctcaattgatttgtactttctactttacctttatttatgagttatatgtatcgctaagttgcacatttttctcctatacatggagcatagatttttagatattctttatgcgctctgccctgcttctgattatctctcttggtctgctgtcatcatgcaggtgttattgccatggcaaattctggacctgattccaatggatcgcagttttacattaccacaatcaagacaagctggtaagttgtattacactataagttaccagtgatcaatctagatggtacaactcctgaaattataagtaccgcaggttggatggggagcatgttgtgtttggcagggtgattcagggaatggattatgtgtacgccattgaagggggtgctggaacttacaatggcaagcctaggaagaaagttgtaatcaccgactctggtgagataccgaaggagaaatgggctgaagaagtgtaggctgttttgtactttggtttgccctgtactttttgggcagcaggtgcagttttacattaccacaaatcaggcaaggcgtctaaaatgttgtacattgtagttagttcatactcaatcgaatcccacttgctgacactgattactcagtgaattctgcactgtgatgaagatgaacacacatattctcagtttctcatgatggtttagcaaggtagaactgtcttttgtaatgcttcatttttttaaggcaatctgcaatgctttgtttggtattgcagtggtttataactatccctgtaaatttctatttttgatgaaaatagttagtgctgttatttttgggaact</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0537600, RefSeq:Os09g0537600