Difference between revisions of "Os09g0551800"
(Created page with "{{JaponicaGene|
GeneName = Os09g0551800|
Description = ATP-dependent helicase, DEAH-box family protein|
Version = NM_001070405.2 GI:297609924 GeneID:4347791|
Length = 8348...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os09g0551800| | GeneName = Os09g0551800| | ||
Revision as of 21:03, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os09g0551800 |
|---|---|
| Description |
ATP-dependent helicase, DEAH-box family protein |
| Version |
NM_001070405.2 GI:297609924 GeneID:4347791 |
| Length |
8348 bp |
| Definition |
Oryza sativa Japonica Group Os09g0551800, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 9:22691461..22699808 |
| Sequence Coding Region |
22691461..22691478,22692480..22692602,22692700..22692753,22692835..22693756,22693838..22694247 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008402:22691461..22699808 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008402:22691461..22699808 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgggcgccgccacggcggacgaagacttcgccaccccgccgccgccggcgcgggcgcccggcggcagggtgtaccaggtgggcggcgtgccggtggagttcccgtacaagccgtacgggacgcagctcgccttcatgggccgcgtcatcgccacgctggaccgcgcgcggcggcagggccgctcccacgcgctcctcgagtcgcccaccggcaccggcaagtcgctctccctcctctgctccgcgctcgcctggcagcgccactacccgctgcgtgccccgcccgccgccgcccccgacccgttcctccacggcggcggcttcgtccccgacgacacccagaagcaggcgacgcccggcgtcccggagaaggcgaccaggaagaagaatgttccgaccatctactatgcgacgaggacgcacgcgcagataacccaggtggtccgggagtaccgcaagacgtcataccgagttcgcatggccatcttggcctcaaggaagcactactgtgtcaataagaatgtgtgcatgagtggcaacatcgatgaactatgcaagtcactccttgatgacagtgctcaaggctgtccagaatacaagaatgcacagaaactaagtcgccatccatcccttcagattggtggctgctatgaagttcatgatattgaggatctcgttagagttggacggaaagtgaaggggtgcccatattttgctgcacaaactatggctgaggcagctcaactggttttctgcccatataactatctgattagtccaatcgtgaggagagcaatggacattgacataagaggctcaatcattgttcttgatgaggctcacaacatagaagacatagcacgtgatgctggaagttttgatgttgatgaagaatcacttctctttttgcggcaagaactagaagggttagtcactgatgaggctgttgcaaagatatacgaacccttgcatgaagttattcaggggcttaatggttggattgatgagcagggaaataaccttcaaaagaatgagtttgagcatcctgcttcattttggactggtgaagaggctatgaaggaactcaagtatgctggcattactcctgtaaacttcccagtattgcaagagtgtgcaacaaaggctattaaagctgcttcagatgctgaatcagaaggagtgcacttaagtggtggttcagctatgacactagagagtttgttctcctcattgagctacttttttgctgagaatggacgccattcaaatgattaccaacttgctttacagcgttttgctaaacgtgaaggcaattctgtcacttctttcattggatggaagtgtgtgatgagtctgtggtgtctcaatcctgctgttgtttttcgagacatcgcagatctaacactttcagtaattctcacatctggcacactctctccaatgggatcctttgcatctgaacttggtgtccagtttgaagcttgcatggaagctcctcatgtaatcaatgctgattctcaggtttttgcaactgtgctatcatctggcccaacaggacgtcgactgaatgccagttatagaactgcaaatgaatattctttccaggatgaacttggagctacactagaagaaatatgcagagtagtgcctggtggtgctcttgtgttttttcctagctacaatttgttggagaaacttcaaaggcgctggtctcagacaggtcaatgggcacgattggaggctcaaaagcatgtatgcgttgagcctagaggaagtaccgaggaacttgagcctgtcctaaaaggatattacaacgcaatccttggcaaggctcccccaaagaaaggcagaggtggtgcaaaacaaattgtgaaaaatcgagtgacaaaggattcatcacaggagtctgctaaaggaggtgctgcttttcttgcagtttgtcgtggaaaggtatctgaggggattgacttctctgatgacaaagctagagttgtggagacaatggatggattgacaaggttttttcaaaatgctgaggaacaaataaaaatcaaagctcaaggtgtgtcccctaaggacagattggatgcttgtgtactcccatctcaaggcgataaaagaaagctgccatggccagaaccaaatttctcaaaccagacagtactgcaaaataataaggatgttaagagtgaaagccacattgatggtgcaggagttgaccgtatgaagttgtctgatacatcatcagagtcatggcatctctcttcaaaacattctggtttagtaaagaaacaaatctccccagaaccagaaaatgtgccaatggcatgccaactccctccctcatacaaagttcaatataatttagaaggtgaagcagataatgggacaaattatgaagtaaatataaacttcattgacttggaagagtgtgatactaagccacggtatgtgaagttaactatctttaatccttcagaacacataacacaacaatctactgttatggaagaaacttatgcagaggtgccaattgctagtcccagtaaccgaaatggggaaaacgcctctacagtgatgaatgaaggagatccggttttagatctgcccatttcgctttcagctgctaacagaaacatttcttgtgtgtccacatcggcagctactcctgaaagatcaggtagcattagtcatttggagcatgaatcttggactaacagaagtgtgaattcccactgccagaaaaggagaaagttaagctcccctatgagctgctgtacctacacagagcgttcatgttctccaagcaaaccctacttacatggtggttgtgatgtaagcatgttgcctggagatctgagaactgatggaatgtgttgcaagagtatgaaaatgtcaagatgtgaaaatgttaaggttgaaagaaacagcaagcttgcagagttcccatcgagggaatctacgcaggagaagcttttcatttgttgcgctagatgcaaaacagcacttggattacaagaggatggctttcttgtttcatgctcatcgtctttgtcctcaaaattttacttgacatatctttggagacatggaccatcagcagatatccttccaggaaaagattttttggcatcaccacccttgaagataaaagtgatggtgtgcaatgtatcttcagtgaacaagatgatgcttggcaacttgagcaatgaaggttctgctcataattctagtttttggtctgaaaaggatggatgtgtgtacaagccagtaacttgtcagacttgctcttgcaaaaacgcctgtgtcacaaccctcggagcacaagttgttgcaactgattcgtcaaatcaacaattttgtgataaggtaattttgtttgatgatcttctgcatgtcaagcatggaccgtcgaaggatcaggctttaagtgctcccataggtactgttaaacccatctcacccccgccagtgattgatctcgagtcctttgcgtacaaaccactgaagaaggatcctgtgccggtgaacacaagaaggtccaagaatgagtggctactatga</cdnaseq> |
| Protein Sequence |
<aaseq>MGAATADEDFATPPPPARAPGGRVYQVGGVPVEFPYKPYGTQLA FMGRVIATLDRARRQGRSHALLESPTGTGKSLSLLCSALAWQRHYPLRAPPAAAPDPF LHGGGFVPDDTQKQATPGVPEKATRKKNVPTIYYATRTHAQITQVVREYRKTSYRVRM AILASRKHYCVNKNVCMSGNIDELCKSLLDDSAQGCPEYKNAQKLSRHPSLQIGGCYE VHDIEDLVRVGRKVKGCPYFAAQTMAEAAQLVFCPYNYLISPIVRRAMDIDIRGSIIV LDEAHNIEDIARDAGSFDVDEESLLFLRQELEGLVTDEAVAKIYEPLHEVIQGLNGWI DEQGNNLQKNEFEHPASFWTGEEAMKELKYAGITPVNFPVLQECATKAIKAASDAESE GVHLSGGSAMTLESLFSSLSYFFAENGRHSNDYQLALQRFAKREGNSVTSFIGWKCVM SLWCLNPAVVFRDIADLTLSVILTSGTLSPMGSFASELGVQFEACMEAPHVINADSQV FATVLSSGPTGRRLNASYRTANEYSFQDELGATLEEICRVVPGGALVFFPSYNLLEKL QRRWSQTGQWARLEAQKHVCVEPRGSTEELEPVLKGYYNAILGKAPPKKGRGGAKQIV KNRVTKDSSQESAKGGAAFLAVCRGKVSEGIDFSDDKARVVETMDGLTRFFQNAEEQI KIKAQGVSPKDRLDACVLPSQGDKRKLPWPEPNFSNQTVLQNNKDVKSESHIDGAGVD RMKLSDTSSESWHLSSKHSGLVKKQISPEPENVPMACQLPPSYKVQYNLEGEADNGTN YEVNINFIDLEECDTKPRYVKLTIFNPSEHITQQSTVMEETYAEVPIASPSNRNGENA STVMNEGDPVLDLPISLSAANRNISCVSTSAATPERSGSISHLEHESWTNRSVNSHCQ KRRKLSSPMSCCTYTERSCSPSKPYLHGGCDVSMLPGDLRTDGMCCKSMKMSRCENVK VERNSKLAEFPSRESTQEKLFICCARCKTALGLQEDGFLVSCSSSLSSKFYLTYLWRH GPSADILPGKDFLASPPLKIKVMVCNVSSVNKMMLGNLSNEGSAHNSSFWSEKDGCVY KPVTCQTCSCKNACVTTLGAQVVATDSSNQQFCDKVILFDDLLHVKHGPSKDQALSAP IGTVKPISPPPVIDLESFAYKPLKKDPVPVNTRRSKNEWLL</aaseq> |
| Gene Sequence |
<dnaseqindica>8331..8348#7207..7329#7056..7109#6053..6974#5562..5971#5449..5490#4675..4719#4345..4532#4078..4234#3911..3994#3687..3780#3264..3381#2844..2936#2700..2772#2478..2565#2030..2100#1856..1935#1709..1770#1464..1605#1264..1364#1130..1174#985..1049#611..686#474..528#1..358#atgggcgccgccacggcggacgaagacttcgccaccccgccgccgccggcgcgggcgcccggcggcagggtgtaccaggtgggcggcgtgccggtggagttcccgtacaagccgtacgggacgcagctcgccttcatgggccgcgtcatcgccacgctggaccgcgcgcggcggcagggccgctcccacgcgctcctcgagtcgcccaccggcaccggcaagtcgctctccctcctctgctccgcgctcgcctggcagcgccactacccgctgcgtgccccgcccgccgccgcccccgacccgttcctccacggcggcggcttcgtccccgacgacacccagaagcaggcgacgcccggtacgcccccccgcgcctctcctctccgctcgtgtcgcttttttgcggcggttcttggagccgcagatctgcaaccattcttgctcatttcgctctgcccgttcttgatgtttaggcgtcccggagaaggcgaccaggaagaagaatgttccgaccatctactatgcgacgtaaggttttctgctctctttgcccaaactgacgagacgatcttgattgattctgaactcttggttggttatctttctgaaggaggacgcacgcgcagataacccaggtggtccgggagtaccgcaagacgtcataccgagttcgcatggccatcttggtaaccattgcccccatctcaatttgcttcttgctttatcttgcgtagtaagattacgcattgttcaaccaaggtttcaagtggcacgtataacttcagacataaattcaatcttcatgcagtagcatagttgataattcctctttatgccacatattgcctgatgtcaaactcttccatttaactacatgctatctgaagttgatttctaatactagtagcggtgttttgaggggtgacacatccttcctctttctgtttttggtgtctgtcaattaataataatcatgcaatgcaggcctcaaggaagcactactgtgtcaataagaatgtgtgcatgagtggcaacatcgatgaactatggtaatatacactatgaaacatttcttcacaagctttcatttccattgccaacactgactgattgttctttccgtcattagcaagtcactccttgatgacagtgctcaaggctgtccagaatacaagtaagatttcctatttcaacatcaaaacatatactaatctgagaacatcccccttttatttccaacacgattgtaaaacatatttgcaggaatgcacagaaactaagtcgccatccatcccttcagattggtggctgctatgaagttcatgatattgaggatctcgttagagttggacggaaagtgaagggttagttgcatgcattccctcttgattcctaagaaaagtattgtgccacttctgatttttgatacctattcaattgccacttttgctgttaatctgcagggtgcccatattttgctgcacaaactatggctgaggcagctcaactggttttctgcccatataactatctgattagtccaatcgtgaggagagcaatggacattgacataagaggctcaatcattgttcttgatgaggctcagtaagtcccaaacaactctgaatctttttctttagatcagttataaagtaaagaatactggctaatgtattcatttcacaatctgcattcttttgtattgcagcaacatagaagacatagcacgtgatgctggaagttttgatgttgatgaagaatcacttctctgtgagttgtctgttattctattaaggctcatggttatcagttcaatttttttttctaagttgaattgaattgtgcttttattaagttttgcggcaagaactagaagggttagtcactgatgaggctgttgcaaagatatacgaacccttgcatgaagttattcaggtaattctactgtattttctagaaaatagagggagaacagagttaacaccgagctatattagttacaagcattaagcttttaatacttctgcaggggcttaatggttggattgatgagcagggaaataaccttcaaaagaatgagtttgagcatcctgcttcattgtatgtaccatgcaatttttgcctcttatcttgtgtatctatttagtgtttttatttattcttccttgtggtttattatttttactatatacttgtgaaaaaaaacgaatacctcaataaggcattacttgtttatgcaacctggcttagacaatattggattgctattgggcatgcataatcgtaaatatattatctccaaaaatcattcaaatgttttcaataaacttaaatactgagttaaaaaaaattctgtttacctttatcttcatgatttgcagaaatttgctacatgtttgcaatgaagcatgaaaataaacatttctgttacattcaatcgattctaagtttctaacattttgtttttgtatcctcagttggactggtgaagaggctatgaaggaactcaagtatgctggcattactcctgtaaacttcccagtattgcaagagtgtgcaacaaaggtgcttcctatttcaagtattacagtgtactaattcttaatgcagctgtgaaacattttctctgtaatattgtttttgggcctttgacattcaaaaatttcagcaaccatcttgatatcatcttgttgttttaggctattaaagctgcttcagatgctgaatcagaaggagtgcacttaagtggtggttcagctatgacactagagagtaaggagcaattattttatttttttatcttttaggaatttaataacctaatgttactgtgcattatgcaggtttgttctcctcattgagctacttttttgctgagaatggacgccattcaaatgattaccaacttgctttacagcgttttgctaaacgtgaaggtgctaatgtgatgtcttatgatcttatcatctgtaagaaaattgtgtttaattcatgaaaagatttcctagtaatgtggaattgccatgtgaacattttatgaaaatgaaatcttgattcatattgtacatataaaattcatatgttgtgagggaaatgcattgtcctttgaatcagggaaagaattaatagatagttgcttgatgtactttgggcttttcatgcagttcgattcaattataacatatccttctagctcttccattattgaattactttatctcaaatttgtagttcatgtaacttttgaattatgacatttgcaggcaattctgtcacttctttcattggatggaagtgtgtgatgagtctgtggtgtctcaatcctgctgttgtttttcgagacatcgcagatctaacactttcagtaattctcacatctgggtaagtctccaagttaatgtttctcttcaaagacttcgtagagtgctttactttgttgtagcaaatatgattgtgaaagcaacatggagaataggtacatatgcaagtcatgcataatggtagctataatttgaatatacgcaattcaagcctctacaggctgaattgtaggtgcatgggccactgagaaatggagatcttccaaactgaatataattagactgtcacctttaagttttctgaaatattcagtttctattcaataggagataacatatagctggttcttaactacatcttcacagcacactctctccaatgggatcctttgcatctgaacttggtgtccagtttgaagcttgcatggaagctcctcatgtaatcaatgctgattctcaggtatgtttgttgcaagttggctctagagtcgagaagcttttgcctggagtgctctaacccctcaatcacattagtgacgtgtgtaagataaaatcaacatgtatctcagtgtatattgtgcacagtgcaggtttttgcaactgtgctatcatctggcccaacaggacgtcgactgaatgccagttatagaactgcaaatgaatattctttccaggtaacttctcattatcctttttctttggtgagttttaagctgatacagtcatatgatccagagttccttttgcatttatacaggatgaacttggagctacactagaagaaatatgcagagtagtgcctggtggtgctcttgtgttttttcctagctacaatttgttggagaaacttcaaaggcgctggtctcagacaggtcaatgggcacgattggaggctcaaaagcatgtatgcgttggtaaggttttgtccaggactctacaatgttttcttaaaattctagaaggcagtaccaaggacattagaagcttcctccatttttacttatgtaatattcaattctttcagagcctagaggaagtaccgaggaacttgagcctgtcctaaaaggatattacaacgcaatccttggcaaggctcccccaaagaaaggcagaggtggtgcaaaacaaattgtgaaaaatcgagtgacaaaggattcatcacaggagtctgctaaaggaggtgctgcttttcttgcagtttgtcgtggaaaggtgctaattccattcctttacttgtattaataaatttatgcacctgcttgaaccctaatttaatttttcgtttgtacaccatgtgctacctactgtcatcagcttatgttatgtggttaccttttattttcattattttcaggtatctgaggggattgacttctctgatgacaaagctagagttgtggtatcctttgttttctcctcatatgttttttatgcaccagagagaatgtaaacttttgcccctacttccctgtaatatctatcatgattggtaatagcaaagagtacagtatttgtaattattacatatatccagcagtttccttgaccaaggcataaggttattgttggcattccatttccaaatatgtaagtcctcatttttcttctatggataatctcaatgtcttgtgctgtactaatcaatttaattcaacatggaccagaaatgacgttcaagtaaagctcaaaaagagatataatgattcatacaaatcatcaaaagatttgttgagtgggaatgaatggtactgccatcaagcatttcgtgctctgaatcaagctgcaggtgtgatgctctattttatctgcttatttacctgcagcgcaggtacttcggttaatatgtttaaaatgatttgtttctatcctttcatttttctaggtcgatgcattcgccataaatttgattatggagggataattttgattggtatgtcatttgttccatgtgtttgattctcaagctttcatatttgactgattccactacttcagtgcttgcaatatgtagttattgattcttactcatcatgctatttgtacagatgagcgttatcaggaagaaagaaatattgtgtatatttctaaatggcttaggaattcaattaggaattgtggtactttccaggagacaatggatggattgacaaggttttttcaaaatgctgaggtatgtagttattactcacctgattttttatatgtgaacaggctatttaaacaccatggcaattgctacaggaacaaataaaaatcaaagctcaaggtgtgtcccctaaggacagattggatgcttgtgtactcccatctcaaggcgataaaagaaagctgccatggccagaaccaaatttctcaaaccagacagtactgcaaaataataaggatgttaagagtgaaagccacattgatggtgcaggagttgaccgtatgaagttgtctgatacatcatcagagtcatggcatctctcttcaaaacattctggtttagtaaagaaacaaatctccccagaaccagaaaatgtgccaatggcatgccaactccctccctcatacaaagttcaatataatttagaaggtgaagcagataatgggacaaattatgaagtaaatataaacttcattgacttggaagagtgtgatactaagccacggtaatttatagtcagtcagtcagtcatatttttacttaatatgttaacccaattctcatttagcctttctgtaatttgcaggtatgtgaagttaactatctttaatccttcagaacacataacacaacaatctactgttatggaagaaacttatgcagaggtgccaattgctagtcccagtaaccgaaatggggaaaacgcctctacagtgatgaatgaaggagatccggttttagatctgcccatttcgctttcagctgctaacagaaacatttcttgtgtgtccacatcggcagctactcctgaaagatcaggtagcattagtcatttggagcatgaatcttggactaacagaagtgtgaattcccactgccagaaaaggagaaagttaagctcccctatgagctgctgtacctacacagagcgttcatgttctccaagcaaaccctacttacatggtggttgtgatgtaagcatgttgcctggagatctgagaactgatggaatgtgttgcaagagtatgaaaatgtcaagatgtgaaaatgttaaggttgaaagaaacagcaagcttgcagagttcccatcgagggaatctacgcaggagaagcttttcatttgttgcgctagatgcaaaacagcacttggattacaagaggatggctttcttgtttcatgctcatcgtctttgtcctcaaaattttacttgacatatctttggagacatggaccatcagcagatatccttccaggaaaagattttttggcatcaccacccttgaagataaaagtgatggtgtgcaatgtatcttcagtgaacaagatgatgcttggcaacttgagcaatgaaggttctgctcataattctagtttttggtctgaaaaggatggatgtgtgtacaagccagtaacttgtcagacttgctcttgcaaaaacgcctgtgtcacaaccctcggagcacaagttgttgcaactgattcgtcaaatcaacaattttgtgataaggtacttgggcatatttttgttgaatcttgtaattgaatgctatctccacattaactaattactatatttgttcaaatgaaggtaattttgtttgatgatcttctgcatgtcaagcatggaccgtcgaaggatcaggtatgacttctttatgtccccaggtttatatccttcttgtcaaatacatttagaaaactagcaaatgcttaatgatgttatttgtttccatgtcaaggctttaagtgctcccataggtactgttaaacccatctcacccccgccagtgattgatctcgagtcctttgcgtacaaaccactgaagaaggatcctgtgccggtgaacacaagaaggtccaaggtcagtcaccagttgcctctgtttcctatcctacacaatttcgctattgttcattttcctagtttatagttttatttcatcttgttgggtaaacttgtaaaggctaacagggtagccgaacaattccgaacctacaaacaacgctgaacttgttcagttttttgttgtttatgtgagcagcttaggttacctggcacagccaaatccaggaatggtgcataatatgaaggattcgtctgctatatgctctgaaagaactgggaagtcaagtacacttcacaagcgaatggggtgccaattgctgtgggttctttttgtgttgttttcccccttctgtaaggaaatatgggcatgcctcttctgggtcaatctcttcatggatgagatcagcatgtttcttgttcttttgttgaagggttgatgtaaaatataaactgccggcagcatggtatatgatgtaaatacagattcgtattttgaatggataaatattataaactgcaaggcaattggaaaaattgttttggctggcattcttaccacggcttctgaaagctgcgttttggacaaaatgtacaggtcatgtgactgcctgtgaccaatatttcaatggatagatgttaaggcagtgaaaattgttttggctgcaattcttaccatggcttctgaaagttgtgttttggggcaaatcatgactgcctgtaaccagaatgagtggctactatgaacaagactgacaagactgacaagactgacaagattcgtattttgaatggataaatattataaactgcaaggcaattggaaaaattgttttggctggcattcttaccacggcttctgaaagctgcgttttggacaaaatgtacaggtcatgtgactgcctgtgaccaatatttcaatggatagatgttaaggcagtgaaaattgttttggctgcaattcttaccatggcttctgaaagttgtgttttggggcaaatcatgactgcctgtaaccagaatgagtggctactatga</dnaseqindica> 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| External Link(s) |
