Difference between revisions of "Os09g0564600"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os09g0564600| Description = Peptidase C1A, papain family protein| Version = NM_001189056.1 GI:297727242 GeneID:9271274| Length = 2596 bp| Defin...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os09g0564600|
 
GeneName = Os09g0564600|

Revision as of 21:04, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0564600

Description

Peptidase C1A, papain family protein

Version

NM_001189056.1 GI:297727242 GeneID:9271274

Length

2596 bp

Definition

Oryza sativa Japonica Group Os09g0564600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:23282249..23284844

Sequence Coding Region

23282249..23282509,23283134..23283271,23283891..23284135,23284379..23284844

Expression

GEO Profiles:Os09g0564600

Genome Context

<gbrowseImage1> name=NC_008402:23282249..23284844 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:23282249..23284844 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggaagccattagtactagcagtagcgttgtcggctatattgctgctggcggcggcggcggcggacgtggacgtgacggtgagggacagtgacctggagtcggaggagacgatgtgggatctgtacgagcggtggcgccgcgtgtacgcgtcgtcgtcgcaggacctgccgtcgtcggacatgatgaagagcaggttcgaggcgttcaaggcgaatgccagacaagtgaacgagttcaacaagaaggagggcatgagctacacgctcggcctcaacaagttctccgacatgagctacgaggagttcgccgccaagtacaccggcggcatgcccggatccatcgccgacgacagaagcagcgccggcgccgtgagttgcaagctgcgggagaagaacgtgcccttgacgtgggactggagagacagtagagctgtcactcctgtcaaggaccaaggcccttgcgggagctgctgggccttctctgtggtgggggcagtggagagcatcaacaaaatcaggacagggattctgctgacgttgtcggagcagcaggttctggactgctccggcgccggcgactgcgtcttcgggtaccccaaggatgcattcaaccacatcgtcaacacaggcgtatctttggacagtcgcggaaaacctccgtactatcctccatacgaggcccagaagaagcagtgcagattcgaccttgagaagcctccatttgtgaagatcgacggcatatgcttcgctcagtctggcgatgaaactgctctgaagctggcagtgttaagccaacccgtgtccgttatcatccaaatcagcgacagattccattcgtaccacgggggtgttttcgatggaccgtgcggaacggagactaaagataaccacgtggtgttagtggtagggtatggcgtgaccacagataatattaaatactggatcgtcaagaactcttggggcgaaggctggggtgaaagtggctatattcgtatgaagcgcgacatcacggacaagaacggaatctgcggcatcactacgtgggcaatgtaccccgtgaagaaatatatagtagctcatgatgatgctgatgttgctgcgtactaa</cdnaseq>

Protein Sequence

<aaseq>MRKPLVLAVALSAILLLAAAAADVDVTVRDSDLESEETMWDLYE RWRRVYASSSQDLPSSDMMKSRFEAFKANARQVNEFNKKEGMSYTLGLNKFSDMSYEE FAAKYTGGMPGSIADDRSSAGAVSCKLREKNVPLTWDWRDSRAVTPVKDQGPCGSCWA FSVVGAVESINKIRTGILLTLSEQQVLDCSGAGDCVFGYPKDAFNHIVNTGVSLDSRG KPPYYPPYEAQKKQCRFDLEKPPFVKIDGICFAQSGDETALKLAVLSQPVSVIIQISD RFHSYHGGVFDGPCGTETKDNHVVLVVGYGVTTDNIKYWIVKNSWGEGWGESGYIRMK RDITDKNGICGITTWAMYPVKKYIVAHDDADVAAY</aaseq>

Gene Sequence

<dnaseqindica>2336..2596#1574..1711#710..954#1..466#atgaggaagccattagtactagcagtagcgttgtcggctatattgctgctggcggcggcggcggcggacgtggacgtgacggtgagggacagtgacctggagtcggaggagacgatgtgggatctgtacgagcggtggcgccgcgtgtacgcgtcgtcgtcgcaggacctgccgtcgtcggacatgatgaagagcaggttcgaggcgttcaaggcgaatgccagacaagtgaacgagttcaacaagaaggagggcatgagctacacgctcggcctcaacaagttctccgacatgagctacgaggagttcgccgccaagtacaccggcggcatgcccggatccatcgccgacgacagaagcagcgccggcgccgtgagttgcaagctgcgggagaagaacgtgcccttgacgtgggactggagagacagtagagctgtcactcctgtcaaggaccaaggcccttgcggtacatacgctacgtgattcatatttatattcaaaatctagtttatttagcatactctctctgtcacatataaaaacaatttataataagattctttgatgttttctagtataatatatctggacatgtttctatccatataaatatattatactagaaaacatcatatcacacgattgtcggtcgaccagcaacgagagaaatactaataattaatataattatatatataaatatatatagggagctgctgggccttctctgtggtgggggcagtggagagcatcaacaaaatcaggacagggattctgctgacgttgtcggagcagcaggttctggactgctccggcgccggcgactgcgtcttcgggtaccccaaggatgcattcaaccacatcgtcaacacaggcgtatctttggacagtcgcggaaaacctccgtactatcctccatacgaggcccagaagaagcagtgcagattcgaccttgtacgtgattacttactctataccagatactccagcatatatacttactctataccagatactcaagcatatatgaaattaattactctctccgtttctaaatatttgacaccgttaatttttttaacagatgtttaaccattcgtcttatttaaaaacttttatgaaatactccctccgtttcgttttatttgacgccgttgactttttatcacatgtttgaccattcgtcttattcaaaaacttttgtgaaatatgtaaaactatacgtatgcataaaagtatatttaacaatgaatcaaatgataggaaaaggattaataattatttaaattttttgaataagacgagcggtcaaacatatgctaaaaagtcaacggtgtcaaataaaacaaaacgtagggagtatgtaaaactatatgtatatatatatataagtatatttaacaatgaatcaaacaataggaaaagaattaataattagttaaatttttaataagacgaacggttaaacatattttaaaaaaatcaacggcgttaaatatttagaaacggaggaagtacctagcagtcgactgacaaaaatatgtatggctgtatgtatttcgtacctatacaggagaagcctccatttgtgaagatcgacggcatatgcttcgctcagtctggcgatgaaactgctctgaagctggcagtgttaagccaacccgtgtccgttatcatccaaatcagcgacagattccattcgtaccacggggtaacttaattactaactactctctccgtccataataagttaattacaatacataacatatcataatattacgaatatgaaaagagtcgtaatactagaatatatcacatctctagtaaattaatttattttacgcgctactagcttctagtagcttctagctagtaattaatctcttttgaaagcattacaacttattccctccggttgtataattcttgacgttttggacaatgacacggttttcaaaatatatctttgattatatttttctattataatacatacaataaataaataaataaaattttacttttgttatactcactctgtcctatattataagagattttggacaggttccctacccgtacctattcaaattcgtaatactagactatgttacatccacccaatatctcttataatatgagacggatggagtggtattttgtaagacaaatctatatatgttgttctagttccttaaacctaaatattttttaagttattgctaattaaagtttaaaaaaagacctaaatattgttctaaacgtccatagttatggaaccggagggagtatatcgatttaattgattgctaacgagtcaattattaatcagggtgttttcgatggaccgtgcggaacggagactaaagataaccacgtggtgttagtggtagggtatggcgtgaccacagataatattaaatactggatcgtcaagaactcttggggcgaaggctggggtgaaagtggctatattcgtatgaagcgcgacatcacggacaagaacggaatctgcggcatcactacgtgggcaatgtaccccgtgaagaaatatatagtagctcatgatgatgctgatgttgctgcgtactaa</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0564600, RefSeq:Os09g0564600