Difference between revisions of "Os09g0570300"

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(Created page with "{{JaponicaGene| GeneName = Os09g0570300| Description = Similar to Short-chain dehydrogenase Tic32| Version = NM_001070520.1 GI:115480782 GeneID:4347912| Length = 4071 bp| ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os09g0570300|
 
GeneName = Os09g0570300|

Revision as of 21:04, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0570300

Description

Similar to Short-chain dehydrogenase Tic32

Version

NM_001070520.1 GI:115480782 GeneID:4347912

Length

4071 bp

Definition

Oryza sativa Japonica Group Os09g0570300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:23594505..23598575

Sequence Coding Region

23594624..23594970,23595823..23595902,23596206..23596359,23596458..23596536,23597243..23597327
,23597674..23597720,23598252..23598410

Expression

GEO Profiles:Os09g0570300

Genome Context

<gbrowseImage1> name=NC_008402:23594505..23598575 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:23594505..23598575 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgtcttcttggttgttccggcggagtgggccctcgggcttctcgtgggcctccaccgccgaccaagtcaccgccgggctctccgccgccggcctcaccgccatcgtcaccggcgcctccagcggcatcggcgccgagacggctcgcgtcctcgccatccgcggggcacacgtcgtcatggccgtccgcaacctcgccgccgcgcagcccgtgcgcgacgccatcctcgccgacgcccctgccgcctccctcgacctcatggagctcgacctcgcctccatggactccgtccgcgccttcgcctccgacttcgccgccaagggcctccccctcaatatcctcatcaacaatgcaggggtgatggcaactcctttctctctctcaaaggatggtatcgagttgcaatttgccactaaccatgttggtcattttcttttgactcatcttctcttggagacaatgaaaaagacctctcgtgaatcaaatgtggaaggaagaatcgttaatgtttcatcagaggggcacaggtttgcatatcgggaaggcatccgctttgccaagataaatgacgagtcggagtacaactccattggagcatatgggcagtcaaagcttgcaaacattttgcatgcgaatgaacttgctaggagatttaaggatgagggtgtcaacataactgcaaattctcttcatcctggatctatcatcacgaaccttcttcgtcaccacagtatcctagatgttctccatcggacacttggtaaattggtgcttaaaaatgctcagcagggggcggccaccacttgttatgttgcattgcacccacaggtgaagggtgtgtccgggaagtacttcagtgacagcaatgtgaacgaggcgagtgagaaaggcaatgacatggagctggccaagaggctgtgggagtacagcatcgagctcatcacctga</cdnaseq>

Protein Sequence

<aaseq>MMSSWLFRRSGPSGFSWASTADQVTAGLSAAGLTAIVTGASSGI GAETARVLAIRGAHVVMAVRNLAAAQPVRDAILADAPAASLDLMELDLASMDSVRAFA SDFAAKGLPLNILINNAGVMATPFSLSKDGIELQFATNHVGHFLLTHLLLETMKKTSR ESNVEGRIVNVSSEGHRFAYREGIRFAKINDESEYNSIGAYGQSKLANILHANELARR FKDEGVNITANSLHPGSIITNLLRHHSILDVLHRTLGKLVLKNAQQGAATTCYVALHP QVKGVSGKYFSDSNVNEASEKGNDMELAKRLWEYSIELIT</aaseq>

Gene Sequence

<dnaseqindica>120..466#1319..1398#1702..1855#1954..2032#2739..2823#3170..3216#3748..3906#atgatgctgacttgtgacgagtagtccactgactagggtagacagtactaggacgaggcaacagcgactgcgttgtcccacccacacatcttgcggttgcgcggcggagagagagattgatgatgtcttcttggttgttccggcggagtgggccctcgggcttctcgtgggcctccaccgccgaccaagtcaccgccgggctctccgccgccggcctcaccgccatcgtcaccggcgcctccagcggcatcggcgccgagacggctcgcgtcctcgccatccgcggggcacacgtcgtcatggccgtccgcaacctcgccgccgcgcagcccgtgcgcgacgccatcctcgccgacgcccctgccgcctccctcgacctcatggagctcgacctcgcctccatggactccgtccgcgccttcgcctccgacttcgccgccaagggcctccccctcaatatcctcatgtactagtactcctctttcaatgccaagtacaaattccctcatttttcagttaggaccagcagtatcctacctacctgcactgcattcactactcactgctgctttcactaaattcagctactagtactatactacctcagttgcaccttgtttttttggacaatgcaacatcatactctacacattcaatcctgcatctctaccccacgctaagacatactccaattccaggagtgggtggaagccattttcatggaattatgattcagctctcagagggactacaacttcctttttgctttctcaagtaggagtagtactagttgcatgctggatacatatgactagcctactgctatattacttctactacggccgcatggacctatttttactgtaaacaacactttcttctatcatgttagctacgatttccatgtttttattgtaaacaatcttactagctgaaggtcacaacaagctcttcctatgcttttctttactcttttctagcgcaaaaatcagggagggcatgttaaatgtatggtttcttgttttaaccatgaaatggtataactccaggaacaatggcatgacttgtgcatgtgtttgtgttttattacatttggtgctcaaaatttttctgcagccactggatatcttcatttatatcttgctgccgttaattatactactatgatagtacagctccttcctatgaataccctaaaaatcacatttagtactaccgacaagtgtctgtgtttcatgcttgtttggttgcgtagttattagaatgcttcttttatagctcatcacacttcctgattggttggtggttttgtttgcagcaacaatgcaggggtgatggcaactcctttctctctctcaaaggatggtatcgagttgcaatttgccactaaccatgttggtatgaacttcatgcaccggttacactgatttaaaagcttctcattaactactacgtagtgttgcaaatgtttttccagccatattctttaagaagtaaggaagactttgcatccttctaattagtcaaatttatttcaacagtccatagcaattttctacttcacctgttcctcaatgttctaattcattatgatagttacggataccaatgagttaaaatgtgtccctttttctctcaaacatgctggagagagctgtgtatcattgcgttaaaatgtgtatctcctgtcataattttcaggtcattttcttttgactcatcttctcttggagacaatgaaaaagacctctcgtgaatcaaatgtggaaggaagaatcgttaatgtttcatcagaggggcacaggtttgcatatcgggaaggcatccgctttgccaagataaatgacgagtcggagtatgcaacttttatgcactttgtttttcttttccttgttaacttccttcaaaggaattgtactgtactaatatatggttcaatcttgtgttgtacaggtacaactccattggagcatatgggcagtcaaagcttgcaaacattttgcatgcgaatgaacttgctaggagatttaaggtgcgcattgctcttctcttagatcatgtcgccagttatagatatattttttttggtgcaacgctgtatttggagttatttcaattgagatatgtttattagcgtgtaatccaacaggagcgttgttccacaagcaccagcaatgaattctatctctagtaatttgctgctaaactctaaaaattgcaccagctagctgtctgttgcactgtttagtaagaaatctacacccatgatagataaacacatcgtgtcaggtattggccaactgaacgttgtctttatttcaggtgttgtccattttgaattgagtaaatttcataaaactacaactatttcgttaaaactatcacatcgctgcaattttagttaggcatttgacaaagctacaaactatagcaaatgatttcaaccataaactgtaactttaacccactatatgactgacatgtgggcccgacctgtagctgtatgattttttaatgttcacctgacaggtgggcccatactcgtcaggcaaataaaggtgcagttttacgccaaagccatcaactgttgactgttgttgcagtttcctgaaatgtctaactaaagttgcagtaaaccgatattttgataaaatagttgtacttttctgaaataaattttaaatttgtacatgtcccatagttttgttttgtattgactatcatcattggtttaacaggatgagggtgtcaacataactgcaaattctcttcatcctggatctatcatcacgaaccttcttcgtcaccacagtatcctagatggtaaaatatacttgaattgaactctaggagatatttagtattcctgcttttgtaagctaaagggatctttcactcatgaactcaaaataattgaactgaaacatgtaacaaaacaaaatctcttgaaaattcatgccacctatggacttaccacaccataaagaaaatagcagcaaggaccaaggatagcaaccaaaaggaagaaaataaccacatactgtgaaacgaaatactagtgcttttacttgactgcagtggtgggttaaaactagatttttcatggttaaaagagcttgttttctgttgtaataactgatctcatgaatattatatttgttatatgcagttctccatcggacacttggtaaattggtgcttaaaaatgctcagcaggtatggttgtgcaccttttttaatattctgggccttctctccattctacgctttatatgtggttatgccaatggttagcaaatctttcatagaaatcagttgtatgcaactggttgttttaatggatacactatttgttggagatgctagttttggcccttacagaaaagctattacacaaaaactctttacatgacaatgggtggaacaatgaatcagctattacagacatctagccgtgctaaagaaaaagcaaaatgcaagataactgagcatttcaaaatgttctctagctggtatggtagtagtacaccagtttttgtttggattttgtgagatataggaaatggcagattaatcctgaggttaagagtagagagcattgcatgatggccagattgtgcttatcattatctgcaatttagttgacgatctagatagggcgggctagaggggggagctgggtggtgcatcaaattcatggtgaatgtaatatgttggtgatggtgagtttgtggtgtaaatgaacagggggcggccaccacttgttatgttgcattgcacccacaggtgaagggtgtgtccgggaagtacttcagtgacagcaatgtgaacgaggcgagtgagaaaggcaatgacatggagctggccaagaggctgtgggagtacagcatcgagctcatcacctgacctgacctgacctgattcatgaactgaatgagagatactatgtaatgttgaagtttgagagagtgcctgtaaagtaaattgtggtaacttaactatggcagctaccatctggtgtgcgtgcgtacgtacatcaaaccaacatgatactagtagtgagtaataagc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0570300, RefSeq:Os09g0570300