Difference between revisions of "Os10g0104900"
(Created page with "{{JaponicaGene|
GeneName = Os10g0104900|
Description = Similar to DNA (cytosine-5)-methyltransferase 1 (EC 2.1.1.37) (Dnmt1) (DNA methyltransferase I) (DNA MTase RnoIP) (MCM...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os10g0104900| | GeneName = Os10g0104900| | ||
Revision as of 21:04, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os10g0104900 |
|---|---|
| Description |
Similar to DNA (cytosine-5)-methyltransferase 1 (EC 2.1.1.37) (Dnmt1) (DNA methyltransferase I) (DNA MTase RnoIP) (MCMT) (M.RnoIP). Splice isoform 3 |
| Version |
NM_001070558.1 GI:115480859 GeneID:4347954 |
| Length |
5148 bp |
| Definition |
Oryza sativa Japonica Group Os10g0104900, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 10:356315..361462 |
| Sequence Coding Region |
356557..356758,356875..356978,357057..357126,357207..357250,360228..360332 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008403:356315..361462 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008403:356315..361462 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ggtgatgttgatgtcatttgtggtgggccaccatgccaaggaataagtggtttcaatcggttcagaaaccgcaaagagccactaaaagacgagaaaaacaaacagatggtgacattcatggatattgtggcatacctgaagcctaagtatgtcctgatggaaaatgttgtagacatactgaagtttgcagatggttaccttggacgttatgccttgagccgtctggtggctatgaagtaccaagcacgacttggaatgatggttgcaggttgttatggcttgccacaatttaggatgcgtgtgttcctctggggagctcttcctaccatggtgctgccaaagtatccgcttcccactcataatgttgttgtccgtggtggtgccccaaatgctttttctcaaagtattgttgcatacgatgaaacacagaagccaacattgaaaaatgcactgctgcttggcgatgcaatttcggatttgccagaggtaaacaaccatcagcctaatgaagtgatggaatatggttcttcccccaaaacagaattccagcgctatatccggcttagccgtaaagaaatgctggatagttcttttgaagggaaggatggtccagatctaggcaagcttttggatcaccagcccttaaagctaaataaggatgaccatgagcgtgtgcagcaaattccagtaaagaagggagccaacttccgggacctgaagggtgtcagggttggggcaaacaacatcgtggagtgggatccagacgttccccgtgtatatttatcttctggcaagcctttggttcctgactacgcgatgtctttcatcaaagggagatcactgaagccatttgggcgcttgtggtgggatgagacggttcctacagttgtgacccgagcagagccacacaaccagattatattgcatccgaatcaggcgagagttctgaccgtaagggagaatgcaaggttgcaggggttcccagactactacaagatgtttggccctatcaaagagaagtatatacaagttggcaatgcagttgctgtacctgttgctcgtgcattgggttactcccttgggcttgcataccagcgtgagtcggaggggagcagccctctgttcgtcctgccagacagcttcacggaagtcgggcgacaggcggcgccggcaagagcatcctctgttggtatccctgttggcgaggttgttgagcaatag</cdnaseq> |
| Protein Sequence |
<aaseq>GDVDVICGGPPCQGISGFNRFRNRKEPLKDEKNKQMVTFMDIVA YLKPKYVLMENVVDILKFADGYLGRYALSRLVAMKYQARLGMMVAGCYGLPQFRMRVF LWGALPTMVLPKYPLPTHNVVVRGGAPNAFSQSIVAYDETQKPTLKNALLLGDAISDL PEVNNHQPNEVMEYGSSPKTEFQRYIRLSRKEMLDSSFEGKDGPDLGKLLDHQPLKLN KDDHERVQQIPVKKGANFRDLKGVRVGANNIVEWDPDVPRVYLSSGKPLVPDYAMSFI KGRSLKPFGRLWWDETVPTVVTRAEPHNQIILHPNQARVLTVRENARLQGFPDYYKMF GPIKEKYIQVGNAVAVPVARALGYSLGLAYQRESEGSSPLFVLPDSFTEVGRQAAPAR ASSVGIPVGEVVEQ</aaseq> |
| Gene Sequence |
<dnaseqindica>4705..4906#4485..4588#4337..4406#4213..4256#1131..1235#927..1048#701..787#546..633#407..475#2..331#gggtgatgttgatgtcatttgtggtgggccaccatgccaaggaataagtggtttcaatcggttcagaaaccgcaaagagccactaaaagacgagaaaaacaaacagatggtgacattcatggatattgtggcatacctgaagcctaagtatgtcctgatggaaaatgttgtagacatactgaagtttgcagatggttaccttggacgttatgccttgagccgtctggtggctatgaagtaccaagcacgacttggaatgatggttgcaggttgttatggcttgccacaatttaggatgcgtgtgttcctctggggagctcttcctaccatggtttgtttccattgcatttgtgaacatttggtagtgtttgatcggaacagtgaccaggtgcatttgttaatgtaggtgctgccaaagtatccgcttcccactcataatgttgttgtccgtggtggtgccccaaatgctttttctgtaagtctgaccataactctaaattccattgaaagtctccgtattctgactagcttgatcttgcttgcagcaaagtattgttgcatacgatgaaacacagaagccaacattgaaaaatgcactgctgcttggcgatgcaatttcggatttgccagaggcaagtgtttcatcatctattaatacgtttcttgacctgcaactgcaatcttaccccttatcttcaggtaaacaaccatcagcctaatgaagtgatggaatatggttcttcccccaaaacagaattccagcgctatatccggcttagccgtaaaggtaataaaacaacctctaatagctatcatttgtgtgctttgaatatgatgggtgggtttatttttgttatcaatgattttttcccttacatttcaccctgtacaccaagtttaattcattttttccccaaatgttctagaaatgctggatagttcttttgaagggaaggatggtccagatctaggcaagcttttggatcaccagcccttaaagctaaataaggatgaccatgagcgtgtgcagcaaattccagtaaagaaggttgtcagttgtacagctttggtcctttgtgaacttgtccactcattctttctgcagtcataatcaatttactgtgtttcagggagccaacttccgggacctgaagggtgtcagggttggggcaaacaacatcgtggagtgggatccagacgttccccgtgtatatttatcttctggcaagcctttggtaagtgttccgtgctctccccattgttgtgaattgtttgctgcatctagtatctgctgcttagtatgcagctagtgccatgctgtttgcagtcacaaggggatgtatttatattcaggggagcacgtttacagttgtgatgcatctattactttgtggggacaaatttacaggcgccctaggtgctgattagcccttttgaattatgctccctttgttttgtattgtcaggcaccttgattttttttctaagtcaattttttttaaaattgatcaagtttatagaagaaacgtagcaatattttcgatactaaacaaatatactatcaaaatatattaaatattagatttaatggaattaatttggtgttataagagttgccatattttttctattaacttggtacacttatagaagtttgacttaacaaaagacaaagtgtcttatgattgaagcggagggagtatattgcatttttaggaaaaatatgttaaaagtattagaaggcctgacaaagtagctagagaatttctaggagtggagtttcaaaccaaagtaacaaagcatggcatcctctaaattttcatgaactttgttatgaggagctcctagcttcctaatcttctattatatactaaaagtccatgaaactttctacaaacgctcctaagctgccatgtagtattcctagaaacactcttaaatcgccacgtggcattttaataagttggtgggcccattattttcaatgaataaatttatctttagagggaaaaaaaaccacaatccctcccaaataccagtcccactctcaaacaaccctagtcggatgtacatagtcgtacatggtacgactatgtacgttcctccatctgataacctattactctaaatataaataaagataattcaaaccggtgaactcattaaatttattttaaaaatacaaactctactaatttttaaagtagaccgttatccctttcatgacaaactaagtaagaacgcaacataagaaaataacaatatttattattttatattaaattcattttatataataaagattgattaaatcaccacatgtcacgttttaaacttaagaaaagtaattaaaagaaaaaaagaaattgatatacctattatttttaaccattagatcattttcagaaaatcttaatccaccacatcatgtcttaaaggttaaaaaaacattgaaatctaaggaaaaaaaacattggttttcacttagatatctgcaaatcagtcctccaccttcacatcctgccagtccatcacatgtgcataatagtgcccaccccttgccatctctcaatcgagcactgcactatttattcctcaccagtccctccctatctagttttagctatcgaagtaaaagagaaacaaccaataattatagatattgaaaagaccatagttttaagctacacatattatttctaatccaactcttgctgtatttatatttaaaacaacaatttaaaatccacatgtctgtattttgcaatataaaatatatgacatttaggcacactccaccagtgcacttggcatgtcatccaaatagcaacggattattatataaattgtcgagacatatttcattactatacatcagtctacaaatgctgatagctatactaaatcaatagtacccaaacaaaattggcaaattcatgttccaatcattgtttttatcgatggacaacacccttgctattttacatgctattggacttgccttgaaaaactatgaaataattcaacaaggcacgttgctccatcatatattgttttgcaaacatgcaaaactaaactagatattcagtgcataagaaaaagatagctgaaattttaatagtctaagctactacattaaaaaataattcgaagggacaaacaatttaacaaacataggttgcatcattatacattgttttgcaaataggcatagcttaacgagataaacaccgtattatgaaaaagaactatctcaaatatgaagatgcagagttgctattgtattaaaaaaaatggtgcctgacttatagaaaacaatatgattacttcgtattttttaaaagggacaagtttgtgcatttgaccctacttttcaaaattagagttaccgtctcaccctgttttgaaatgagtaaacttaaaaaatagcgttagtagattggtatttaggttttgaaataggccaaaatggacaattgtcctttttaaaaaaactaatatgctcaaataatccaaatgttcttcctattttctgtgtaccatgttaccctaaacaacaattttaggcagtcacttgacactctaataaattagagaaaattctagaaattccgagaaaagaaaagcaaagcatcttgccatccttttatcacttaaacaagtggattcattatttccaatcattacatataccttatatatatatataaaaatatcacatccacctccaccttctgctacctatcatattcaagcatgtattcatgatagatcacattccaaaaataatattacccaattatatttagccgtccaaccatattcaccataggctacgtagagcctcatgtcccaaccaatccatccattaataaaaattgacaacttatataggtaatcaattaaaaaatgaaaaaaaaaaacaccacttttctgttacactaaatttggtagacatgttttctaaacaaaataagtccaaaataagacgattacaaggattataaaaaaaatgtttatggggattgcttaagtaagcaatagaaaaaaatggagaaatcgtgcttttgaagcatagcaaatgttttccagtttatattccgccattgtaagtgtataaaataacactatacgatgcatgcccgcgcagatgcgcgggctatcttcctagttgttacaattgctgaagagctagcttgtctgtgtggctaggttcctgactacgcgatgtctttcatcaaagggagatcactgaagtaagttgcacaatatctctggtttcttctcctgcagtaaaatttggagtgcgatatatttcttacaaatgttgttgtaggccatttgggcgcttgtggtgggatgagacggttcctacagttgtgacccgagcagagccacacaaccaggtccgattgtcaagaaagtatagcaatttctacatctgtgcatcctttctcaacgtgtctgaatgtgcttctctgcagattatattgcatccgaatcaggcgagagttctgaccgtaagggagaatgcaaggttgcaggggttcccagactactacaagatgtttggccctatcaaagagaagtaagctttgtccctttcacatcacatattatattgagttgcaccgtccatcaacaatggtgtcaactctaaatgttgggttctaactggaaggctgtgtttgatggcggttgcaggtatatacaagttggcaatgcagttgctgtacctgttgctcgtgcattgggttactcccttgggcttgcataccagcgtgagtcggaggggagcagccctctgttcgtcctgccagacagcttcacggaagtcgggcgacaggcggcgccggcaagagcatcctctgttggtatccctgttggcgaggttgttgagcaatagaacacttgggtagagtagagtcattatttggttcgattcgaaccgatccgggagaatgttgtttaaaatcactgatcagccaccttggtgctgtcatgtgatcaccatcaatgttattattgattgattgaatgttgtaaggctggtggcactcctgcttgagtgcttgttgtacttgtagcataaggtccaaaacattcattcatatccttctatgggctatcttatgtctgtatcctgat</dnaseqindica> 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