Difference between revisions of "Os10g0182000"
(Created page with "{{JaponicaGene|
GeneName = Os10g0182000|
Description = Similar to Alanyl-tRNA synthetase, mitochondrial precursor (EC 6.1.1.7) (Alanine--tRNA ligase) (AlaRS)|
Version = NM_...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os10g0182000| | GeneName = Os10g0182000| | ||
Revision as of 21:06, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os10g0182000 |
|---|---|
| Description |
Similar to Alanyl-tRNA synthetase, mitochondrial precursor (EC 6.1.1.7) (Alanine--tRNA ligase) (AlaRS) |
| Version |
NM_001070789.1 GI:115481321 GeneID:4348211 |
| Length |
10582 bp |
| Definition |
Oryza sativa Japonica Group Os10g0182000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 10:5313061..5323642 |
| Sequence Coding Region |
5313068..5313583,5314518..5314658,5314828..5314974,5315126..5315278,5315409..5315544 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008403:5313061..5323642 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008403:5313061..5323642 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgctcgtggtacgccgcgcgtgctgcctcctccggctctcctcctcctcccacccgcccgcgactagggttttgcccgccgccatctacctcacctcctcctcctccgccgccgcatccgcccccgcgccaccggcgatggcggcctcgacggagtggccggcgagccgagtgcgggagaccttcatctccttcttcgagtccaagtcccacacgcggtggccgtccagccccgtcgtccccgtcgacgaccccacgctgctgttcgccaacgccgggatgaaccagttcaagccggtcttcctcggcaccgccgccccggacgcgccgctgggccgcctccgccgcgcctgcaacacccagaagtgcatccgcgccggggggaagcacaacgacctcgacgacgtcgggaaggacacctaccaccacaccttcttcgagatgctcgggaactggtccttcggggactacttcaaggaggaggccatcggatttgcctgggagctcctcacccaggtgtacaaattgcctaccgatagaatttatgcgacttactttggtggtgatgagaaatttggacttgctcctgatacggagtcgaagaacatatggttgaaatacctacccaaagaaaaagttctacctttcggttgcaaggataatttctgggagatgggtgatactggtccttgtgggccatgtactgaaattcattttgatcgtgttggcaaccgtgatgctgcttccctagtgaacaatgatgaccccacttgtattgagatatggaatcttgtgttcattcagttcaatagggaagcagattgtactctgagacctttaccagcaaaacatgttgacacaggaatgggatttgaacgcttaacttctatccttcagaataaaatgagcaattatgacacagatgtattcatgccaatatttgatgccatccaccaattggctggcaatggaattcaatcatactcgggtaaagtaggtcctgaagatgttgacaaagttgatatggcttacagagtagttgcagatcacataagaaccctttcgtttgctattgctgatggttctcaacctggaaatgagggcagagaatatgttctgaggcgtattcttaggcgcgctgttcactttggtcatcaaaagttgaaagcaaagcaaggattttttagctctcttgtacatgtatttgtccaactgatgggagatgtattccctgagctgaaggacaatgaaaagaagatcaaagatataattaaagatgaagaggaaagctttgagaacactctagcaaagggttttgaaaaatttaagaaagcggcagatgctgttaaagagagtggaggaacagtacttagtggacaggatgcatttgtcctgtgggacacctatggctatccagttgacctgactgaggtcatgggagttgactatggcttgagtgtggatcgggagggttttgatgctgcaatggaagaagcgaggcagaaggctaggaatgcacgcttcaaggctggggaaaattccattgtcttggatgccaatgctacagcacagctgcgcaaccaagggcttgctagtacagatgatagcccgaagtatggttataaggacaatgacagtgtggtgaaggctatctacactggttcagaatatgtaagtgccgcatctggcgatgaggactttggccttgtcctggaaagtacaagcttctacgctgaacagggtggtcagatatatgacactgggaaaattgaagggtctttcggatctttcaatgtaactaatgttcaagtatttgctgggtatgtgctgcatatgggctcatttacaaaaggttccaaggcattgtctgttggtgataaagtggcatgcaaggttgattatgctcgccgtgctctcattgctccaaaccatacatgtacccatatgctgaactttgctctacgggaaatacttggtgatcatgttgaccagaaaggttcaattgttctcccagagaagctacggtttgatttctcccatgggaaacctgttcagccagaagatttgcggaaaattgagtctatagtgaatcaacagataaaagacaaactggaagtatttgcacgtgaaataaaattagcagatgcgaagcgcataaatggtctacgagctgtgtttggtgaaatctatcctgatccggtaagagttgtatcagttggtcgcaaagtggaagatctacttgccaatcctgaaagcaaagaatggctatccatttcaacagagctgtgtggcggtacacacattaaaaacactagcgaggcagaagcatttgccctgttgtccgaggagggtattgctaaaggtgttaggaggatcacagctgttactgctaaacatgcctctgatgctataaaggatgcatcatctattgattctgaaatcaatgaagcatcaaaattggagggagctatattggaaaagacgattgcttccatcaagagcaagcttgatacagctttaattccagctgcaagaaaagctgatcttaaaggccgggtgtcgaagttggaggatgaacttaggaaggccaagaagaaaatgggcgaggagaacatccagaaggccgtgaagtttgcaatagatgccgcccaaactgctctttctgaaggaaagcgcttctgtgttgctcatgtagatgtgggtcttgacacaagtgctattcgggaagcagttatcaaagtcaaggaccagaaggatttgccaatcatgctattcagcacggatgaagccacgaataaggcagtcatttatgctggtgtgcctcccagcgctgctaacagcttgaaggtgttggattggttgacaccatcgattgcgcccctcaaaggaaagggaggtggtggcaagaatggaattgcccagggccagggaactgaggcctctcaactaaaggaagctatggaggttgctacccagatagcttcaatgaagctggtctaa</cdnaseq> |
| Protein Sequence |
<aaseq>MLVVRRACCLLRLSSSSHPPATRVLPAAIYLTSSSSAAASAPAP PAMAASTEWPASRVRETFISFFESKSHTRWPSSPVVPVDDPTLLFANAGMNQFKPVFL GTAAPDAPLGRLRRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKE EAIGFAWELLTQVYKLPTDRIYATYFGGDEKFGLAPDTESKNIWLKYLPKEKVLPFGC KDNFWEMGDTGPCGPCTEIHFDRVGNRDAASLVNNDDPTCIEIWNLVFIQFNREADCT LRPLPAKHVDTGMGFERLTSILQNKMSNYDTDVFMPIFDAIHQLAGNGIQSYSGKVGP EDVDKVDMAYRVVADHIRTLSFAIADGSQPGNEGREYVLRRILRRAVHFGHQKLKAKQ GFFSSLVHVFVQLMGDVFPELKDNEKKIKDIIKDEEESFENTLAKGFEKFKKAADAVK ESGGTVLSGQDAFVLWDTYGYPVDLTEVMGVDYGLSVDREGFDAAMEEARQKARNARF KAGENSIVLDANATAQLRNQGLASTDDSPKYGYKDNDSVVKAIYTGSEYVSAASGDED FGLVLESTSFYAEQGGQIYDTGKIEGSFGSFNVTNVQVFAGYVLHMGSFTKGSKALSV GDKVACKVDYARRALIAPNHTCTHMLNFALREILGDHVDQKGSIVLPEKLRFDFSHGK PVQPEDLRKIESIVNQQIKDKLEVFAREIKLADAKRINGLRAVFGEIYPDPVRVVSVG RKVEDLLANPESKEWLSISTELCGGTHIKNTSEAEAFALLSEEGIAKGVRRITAVTAK HASDAIKDASSIDSEINEASKLEGAILEKTIASIKSKLDTALIPAARKADLKGRVSKL EDELRKAKKKMGEENIQKAVKFAIDAAQTALSEGKRFCVAHVDVGLDTSAIREAVIKV KDQKDLPIMLFSTDEATNKAVIYAGVPPSAANSLKVLDWLTPSIAPLKGKGGGGKNGI AQGQGTEASQLKEAMEVATQIASMKLV</aaseq> |
| Gene Sequence |
<dnaseqindica>8..523#1458..1598#1768..1914#2066..2218#2349..2484#4220..4316#4712..4832#5298..5363#5705..5758#5844..5939#6549..6647#6829..6951#7506..7649#7742..7813#7893..7968#8048..8190#8293..8401#8469..8656#8885..8974#9096..9278#10027..10200#10306..10377#aagtcacatgctcgtggtacgccgcgcgtgctgcctcctccggctctcctcctcctcccacccgcccgcgactagggttttgcccgccgccatctacctcacctcctcctcctccgccgccgcatccgcccccgcgccaccggcgatggcggcctcgacggagtggccggcgagccgagtgcgggagaccttcatctccttcttcgagtccaagtcccacacgcggtggccgtccagccccgtcgtccccgtcgacgaccccacgctgctgttcgccaacgccgggatgaaccagttcaagccggtcttcctcggcaccgccgccccggacgcgccgctgggccgcctccgccgcgcctgcaacacccagaagtgcatccgcgccggggggaagcacaacgacctcgacgacgtcgggaaggacacctaccaccacaccttcttcgagatgctcgggaactggtccttcggggactacttcaaggaggaggccatcggatttgcctgggagctcctcacccaggtatcggatcctactctctctctcatagatcccctgtttgttctcgtgcggatgctaatgggctgtgcgaatctgattcgattctatttggaatcatgagtttggttgggttggcatgtaactgtatcgagcagcagatttagaggttctccagtgaggagaattggcatatgcgctgacctggggtttagcggtgttgccctgggtttttgggatggcatgacagaaattaattaagcagttctgttgtctgtgtttgttgtgaaatgaaagattgtattatttgtgagtgattggaatttaggaagtgtaccaatttggcatgtcctgtgatgaaagtttggattgtttgatggcatcattacataaactttgatgcatttgcacgtataacttcaatttgggcagtagcaccggttcttgttgtgtttcatagatcaagtttcttggggtcagcttctcctgggaagcttccatctgaaaaacagaactgttactttgtaaatttgtggaatgtatatgcctgattttgcaagtctgatggaatctgcctgtgccctgtaaagcttacctgtctactgatgttttggattcgtaaatcttcttgtagtgttgttacttcatgattacgcaatggtctaatgacctacgatttgaacttgaaaatgcaaattcaaaggattgaggaaggtacattgagtgataaggtttggttatgctgtttggttgttgaccgtgcatataaaattgtgtagtagtctaaggtactacctaggcagtaaaaatccatttgttgggagtcttgtactggtctgagtactgcatgtcgtatcatttttaatgatataaggctttggactaagaacactctgaaagtaatcatatatctatgtaaataaatataagcggccttcttactggttgctaaatgcaggtgtacaaattgcctaccgatagaatttatgcgacttactttggtggtgatgagaaatttggacttgctcctgatacggagtcgaagaacatatggttgaaatacctacccaaagaaaaagttctacctttcggttgcaaggttagttcttgtaattggtgaaagctcttggcagtgtagatcataacaacctatacacttacatatgtgttaatttctgttgggccatattgtctttcgattgatcattgccatcatcttaatgccacttcattatttgcttattagcaaacctttttaacttcaacaggataatttctgggagatgggtgatactggtccttgtgggccatgtactgaaattcattttgatcgtgttggcaaccgtgatgctgcttccctagtgaacaatgatgaccccacttgtattgagatatggaatcttgtgttcattcaggttagcatgctactttttattattgccctttttgtggatgggaaagctttacattgtcagcaattattctgttatatttgtacatgatgtcttaaatcttctcttttttattttcatatactgacacatactttattctattttatcttagttcaatagggaagcagattgtactctgagacctttaccagcaaaacatgttgacacaggaatgggatttgaacgcttaacttctatccttcagaataaaatgagcaattatgacacagatgtattcatgccaatatttgatgccatccaccaagtaggttgactatgcacacttgaagttgctttcatgctcttctcatctaaattatatttgatttacttattaattattcttaggtacatgatatatgttaatgatttgatatccgtatatataattgcagttggctggcaatggaattcaatcatactcgggtaaagtaggtcctgaagatgttgacaaagttgatatggcttacagagtagttgcagatcacataagaaccctttcgtttgctattgctgatggttctcaacctggtaagtgtgtactgtttagcatgtgtttgattcaagggtcgggataggtcgggttgtgttgaacccatttttcaggatgtttggtttggggacaggtgggatgggatggaccctgatagggaatattcccctaagatccaatccaacccacttttttctctcactgacatgtgggcgtgggccatcccttaaatagtaggaccattccatccctcgtgccaaacagatagatggtccctcaaaaactgcggaccaatccaacccacttttttctcgctgacatgtgggccatcccttaaaaagtaggaccatcccatccctcatgccaaacagatagatgggaccatcccatcccaaaaatagggaagagtccaacccatcccacctcgtccccaaaccaaacacatgcacgcaaatggcttgttgaggaataaacatcttgctcccttgcattctaaactatgatattcttcaagcatatgtgtttggtttagggatgaggtgggatgggttaggtccatcccagatttttgggatagggtggtcctattttctgtttgaaaggatggagtttagccctgttttttgtttggtttgagggatagaaggggatggaatggtcctattacttgtttggttagagggatggagaagagatagttgatagagatacctcatgtaaagttcatgaggttacctctcttgtatacagatcaaatacatgttaaacatataggaaaaaatatagtgcattttttttttaaaagccatgcatatatgaaactatttataaagactatcgacagaagtaaaccatgaaccaaatttgtcatgattaactcatcaaaacatacaaagcacacaaatttttgaggaaaacgagtcctgctccttgctgctcttgctctgggaggaaatcacaaatctacataaacaaatcaaacaatggaatcatggggcttgaactttcgagctgttggattgctgtaacattgccgcctgcaatatcactgcagagccactcaaaaaatcttatcgttttggatcaatctgcaactcagccgaggagacagaggatgtgaggagggaggaggcctcgggcgctgccgtaggttgcagccgctggctttgcttccttccgctgtcgccagctttgatgaggatgagcagccggcgagagagatgcaaggagggaggaggctatgggcgacctggctcctgcgcaccgtgtcgccgctgccactgcgagcgcacgccaccgttgcctctcgctctctcgatctggatggggaaaaatgggagaggggaatggtgaatccaggggtaaaggatatggttaccgcgcgtgcggctcatatgaggcacaccagcggaggtgggtcaacgcaatccgccagtttttgcatggatcaaccaacctggatatatgcagaatattccctttcggacccaacccaacccagagagtccttcaaccttacctataaaaatgggatggccccaacccaacccaccaaatccatccaaccaaaacacatgccaaaatttctactacctgttatcaatacaccatctaggtcaacctttgtgctaaggatggtgaagtactaaaaagaacatcagttccaaactgccaaacccataacttctatatttttctatgtatttgttagtgtcaaccatcactttgtcgcacaattatatttatttgtttctaatatgattacttcttcaggaaatgagggcagagaatatgttctgaggcgtattcttaggcgcgctgttcactttggtcatcaaaagttgaaagcaaagcaaggattttttagctcgtaagaacaatgatttatctgcattatgtaccatgcctttatgctgaacaatatgcttgcatagccttttttttaatatatggagtgctagtaacatgatataggagtcataataaatctgttgtgttgataaggcaagattggtgtttccatcatatgatttttgctaaaattagctagttggtattaagtcattgagataatcatttcagacttccttatgggctgggtcttaggtcttaattcacaactcaaaccacttgcttgtttgtggtcatactagtcttatacataatgaaaggtagtgggtcaataaccctgtttaacttttagaaacatatttacatgaacgtatgtgatttatcacttacattaaaattttctggcttggacagtcttgtacatgtatttgtccaactgatgggaga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